[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 179 items for (author: boehringer & d)

EMDB-19078:
Saccharomyces cerevisiae Prp43 helicase in complex with Pxr1
Method: single particle / : Rabl J, Portugal Calisto D, Panse VG

PDB-8rdy:
Saccharomyces cerevisiae Prp43 helicase in complex with Pxr1
Method: single particle / : Rabl J, Portugal Calisto D, Panse VG

EMDB-17691:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (icosahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17694:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (tetrahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18616:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 1; 3.4 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18617:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 2; 3.7 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

PDB-8piu:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17653:
Mouse RPL39L integrated into the yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

PDB-8pfr:
Mouse RPL39L integrated into the yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

EMDB-17549:
Yeast 60S ribosomal subunit, RPL39 deletion
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

EMDB-17550:
Mouse RPL39 integrated into the yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

EMDB-17552:
Yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

PDB-8p8m:
Yeast 60S ribosomal subunit, RPL39 deletion
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

PDB-8p8n:
Mouse RPL39 integrated into the yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

PDB-8p8u:
Yeast 60S ribosomal subunit
Method: single particle / : Rabl J, Banerjee A, Boehringer D, Zavolan M

EMDB-15295:
African cichlid nackednavirus capsid at pH 7.5
Method: single particle / : Pfister S, Rabl J, Boehringer D, Meier BH

EMDB-16371:
African cichlid nackednavirus capsid at pH 5.5
Method: single particle / : Pfister S, Rabl J, Boehringer D, Meier BH

PDB-8aac:
African cichlid nackednavirus capsid at pH 7.5
Method: single particle / : Pfister S, Rabl J, Boehringer D, Meier BH

PDB-8c0o:
African cichlid nackednavirus capsid at pH 5.5
Method: single particle / : Pfister S, Rabl J, Boehringer D, Meier BH

EMDB-13661:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M

PDB-7pub:
Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M, Saurer M, Ramrath DJF, Fluegel T, Boehringer D, Ban N

EMDB-13660:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M

PDB-7pua:
Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Method: single particle / : Lenarcic T, Leibundgut M, Saurer M, Ramrath DJF, Fluegel T, Boehringer D, Ban N

EMDB-13206:
Tetrameric building block of the human GID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13207:
Human GID complex
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13209:
The five-subunit hGID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13210:
Six-subunit hGID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-12736:
Ribosomal methyltransferase KsgA bound to small ribosomal subunit
Method: single particle / : Stephan NC, Ries AB

PDB-7o5h:
Ribosomal methyltransferase KsgA bound to small ribosomal subunit
Method: single particle / : Stephan NC, Ries AB, Boehringer D, Ban N

EMDB-12303:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Method: single particle / : Jomaa A, Lee JH

EMDB-12304:
SRP54 and SRP RNA proximal site
Method: single particle / : Jomaa A, Ban N

EMDB-12305:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in the early state B
Method: single particle / : Jomaa A, Lee JH, Shan S, Ban N

PDB-7nfx:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Method: single particle / : Jomaa A, Lee JH, Shan S, Ban N

EMDB-11892:
Structure of native royal jelly filaments
Method: helical / : Mattei S, Ban A

EMDB-11898:
Tomographic reconstruction of native glycolipoprotein filaments in honeybee royal jelly
Method: electron tomography / : Mattei S, Ban A, Picenoni A, Leibundgut M, Glockshuber R, Boehringer D

PDB-7asd:
Structure of native royal jelly filaments
Method: helical / : Mattei S, Ban A, Picenoni A, Leibundgut M, Glockshuber R, Boehringer D

EMDB-11562:
Mouse Hoxa9 IRES like element bound to the human 80S ribosome
Method: single particle / : Boehringer D, Lenarcic T, Quade N, Leppek K, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11563:
Mouse Hoxa9 IRES-like element bound to the human 40S ribosomal subunit head - IRES binding site
Method: single particle / : Boehringer D, Lenarcic T, Quade N, Leppek K, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11564:
Mouse Hoxa9 IRES-like element bound to the human 40S ribosomal subunit - 40S head
Method: single particle / : Boehringer D, Lenarcic T, Quade N, Leppek K, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11565:
Mouse Hoxa9 IRES-like element bound to the human 40S ribosomal subunit - 40S body
Method: single particle / : Boehringer D, Lenarcic T, Quade N, Leppek K, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11566:
Hoxa9 IRES P4 stem-loop bound to the 40S ribosomal subunit - 40S head
Method: single particle / : Lenarcic T, Boehringer D, Leppek K, Quade N, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11567:
Hoxa9 IRES P4 stem-loop bound to the 40S ribosomal subunit - 40S body
Method: single particle / : Lenarcic T, Boehringer D, Leppek K, Quade N, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11568:
human 40S ribosomal subunit (control)
Method: single particle / : Lenarcic T, Boehringer D, Leppek K, Quade N, Fujii K, Susanto TT, Xue S, Genuth NR, Barna M, Ban N

EMDB-11488:
cryo-EM structure of human mTOR complex 2, overall refinement
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

EMDB-11489:
cryo-EM structure of human mTOR complex 2 in absence of ATP-gamma-S
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

EMDB-11490:
Human mTOR complex 2 with additional density close to the mLST8
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

EMDB-11491:
Human mTOR complex 2 with additional density close to the mLST8
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

EMDB-11492:
cryo-EM structure of human mTOR complex 2, focused on one half
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

PDB-6zwm:
cryo-EM structure of human mTOR complex 2, overall refinement
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

PDB-6zwo:
cryo-EM structure of human mTOR complex 2, focused on one half
Method: single particle / : Scaiola A, Mangia F, Imseng S, Boehringer D, Ban N, Maier T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more