[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 389 items for (author: andersen & g)

EMDB-50842:
Structure of active human CD109
Method: single particle / : Almeida AV, Andersen GR

PDB-9fx3:
Structure of active human CD109
Method: single particle / : Almeida AV, Andersen GR

EMDB-50841:
Structure of methylamine activated CD109
Method: single particle / : Almeida AV, Andersen GR

PDB-9fx2:
Structure of methylamine activated CD109
Method: single particle / : Almeida AV, Andersen GR

EMDB-19699:
Structure of native human CD109
Method: single particle / : Almeida VA, Andersen GR

PDB-8s3o:
Structure of native human CD109
Method: single particle / : Almeida VA, Andersen GR

EMDB-50600:
Cryo-EM structure of human CD163 SRCR1-9 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

PDB-9fno:
Cryo-EM structure of human CD163 SRCR1-9 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

EMDB-19759:
Small circular RNA dimer - Class 3
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-8s6w:
Small circular RNA dimer - Class 3
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-47889:
Cryo-EM structure of USP1-UAF1-Ubiquitin in complex with TNG348
Method: single particle / : Whittington DA

PDB-9ebs:
Cryo-EM structure of USP1-UAF1-Ubiquitin in complex with TNG348
Method: single particle / : Whittington DA

EMDB-50444:
Cryo-EM structure of human CD163 SRCR2-4 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

EMDB-50570:
Cryo-EM structure of human CD163 SRCR1-9 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

PDB-9fhb:
Cryo-EM structure of human CD163 SRCR2-4 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

PDB-9fmu:
Cryo-EM structure of human CD163 SRCR1-9 in complex with haptoglobin-hemoglobin
Method: single particle / : Andersen CBF, Kollman JM

EMDB-51918:
Small circular RNA dimer - Class 1
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51929:
Small circular RNA dimer - Class 2
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51932:
Small circular RNA dimer - Class 4
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51934:
Small circular RNA dimer - Class 5
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h82:
Small circular RNA dimer - Class 1
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h83:
Small circular RNA dimer - Class 2
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h86:
Small circular RNA dimer - Class 4
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

PDB-9h8a:
Small circular RNA dimer - Class 5
Method: single particle / : McRae EK, Kristoffersen EL, Holliger P, Andersen ES

EMDB-51524:
Maps from particle subsets of methylamine treated human complement C3 showing three distinct ANA positions
Method: single particle / : Joergensen MH, Andersen GR

EMDB-50504:
in situ 70S Myxococcus xanthus ribosome
Method: subtomogram averaging / : Xu P, Schumacher D, Liu C, Dickmanns M, Beck F, Plitzko J, Baumeister W, Sogaard-Andersen L

EMDB-50515:
PomX filament from Myxococcus xanthus
Method: single particle / : Xu P, Schumacher D, Liu C, Dickmanns M, Beck F, Plitzko J, Baumeister W, Sogaard-Andersen L

EMDB-16103:
Human serotonin 5-HT3A receptor (apo, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-16104:
Human serotonin 5-HT3A receptor in complex with vortioxetine (detergent, ECD only, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-16105:
Human serotonin 5-HT3A receptor in complex with vortioxetine (nanodiscs, ECD, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8bl8:
Human serotonin 5-HT3A receptor (apo, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8bla:
Human serotonin 5-HT3A receptor in complex with vortioxetine (detergent, ECD only, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

PDB-8blb:
Human serotonin 5-HT3A receptor in complex with vortioxetine (nanodiscs, ECD, active/distorted conformation)
Method: single particle / : Lopez-Sanchez U, Nury H

EMDB-17325:
Focused Cryo-EM map on TE-CUB of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17326:
Focused Cryo-EM map on MG-ring of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17327:
Combined map of C3* (composite structure)
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17328:
Homogeneously refined Cryo-EM map centred on MG7 of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-40365:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #011)
Method: electron tomography / : Liu J, Ren G

EMDB-40366:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #012)
Method: electron tomography / : Liu J, Ren G

EMDB-40367:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #013)
Method: electron tomography / : Liu J, Ren G

EMDB-40368:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #014)
Method: electron tomography / : Liu J, Ren G

EMDB-40369:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #015)
Method: electron tomography / : Liu J, Ren G

EMDB-40370:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #016)
Method: electron tomography / : Liu J, Ren G

EMDB-40371:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #017)
Method: electron tomography / : Liu J, Ren G

EMDB-40372:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #018)
Method: electron tomography / : Liu J, Ren G

EMDB-40373:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #019)
Method: electron tomography / : Liu J, Ren G

EMDB-40374:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #020)
Method: electron tomography / : Liu J, Ren G

EMDB-40375:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #021)
Method: electron tomography / : Liu J, Ren G

EMDB-40377:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #022)
Method: electron tomography / : Liu J, Ren G

EMDB-40378:
Tertiary structure of an individual particle of self-folding RNA polymer (particle #023)
Method: electron tomography / : Liu J, Ren G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more