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TitleParticles of echovirus 18 open to release their genomes in vivo.
Journal, issue, pagesProc Natl Acad Sci U S A, Vol. 123, Issue 30, Page e2601182123, Year 2026
Publish dateJul 28, 2026
AuthorsLiya Mukhamedova / David Buchta / Zuzana Trebichalská / Yevgen Levdansky / Jana Moravcová / David Potěšil / Zbyněk Zdráhal / Dominik Hrebík / Lucie Nepovímová / Torleif Tollefsrud Gjølberg / Jan Terje Andersen / Jiří Nováček / Tibor Füzik / Pavel Plevka /
PubMed AbstractEnteroviruses cause a broad spectrum of human diseases, ranging from mild respiratory or gastrointestinal infections to severe neurological disorders such as aseptic meningitis and encephalitis. ...Enteroviruses cause a broad spectrum of human diseases, ranging from mild respiratory or gastrointestinal infections to severe neurological disorders such as aseptic meningitis and encephalitis. Enterovirus cell entry involves receptor-mediated endocytosis followed by destabilizing rearrangements of the virus capsid that enable genome release. However, the mechanism of enterovirus genome release has not been visualized in infected cells. Here, we used cryoelectron tomography and microscopy to image echovirus 18 (E18) entry into host cells and its interaction with the neonatal Fc receptor (FcRn). 30 min postinfection, endosomes and cytoplasm contained empty capsids missing one or several pentamers of capsid proteins, providing evidence that in vivo E18 releases its genome through capsid opening. In vitro, FcRn binding induced the expulsion of pocket factors from hydrophobic pockets in VP1, priming the virus for uncoating. The cryoelectron microscopy reconstruction of genome-containing particles of E18 inside infected cells did not reveal pocket factors, indicating that receptor binding triggers the same priming process during infection. We did not detect activated particles in infected cells, suggesting that these intermediates are short-lived and rapidly release their genomes in vivo. Our results identify capsid opening as the in vivo mechanism of echovirus 18 genome release, providing structural evidence for a process previously only inferred from in vitro experiments.
External linksProc Natl Acad Sci U S A / PubMed:42475568
MethodsEM (single particle)
Resolution2.26 - 18.1 Å
Structure data

EMDB-54484: Echovirus 18 in situ, virion, C1
Method: EM (single particle) / Resolution: 9.5 Å

EMDB-54506: Echovirus 18 particle missing two pentamers in situ, symmetrized reconstruction (C2)
Method: EM (single particle) / Resolution: 8.3 Å

EMDB-54510: Echovirus 18 particle missing two pentamers in situ, asymmetric reconstruction
Method: EM (single particle) / Resolution: 9.6 Å

EMDB-54622, PDB-9s63:
Echovirus 18 in situ, virion, I4
Method: EM (single particle) / Resolution: 4.3 Å

EMDB-54763: Echovirus 18 particle missing three pentamers in situ, symmetrized reconstruction (C3)
Method: EM (single particle) / Resolution: 10.0 Å

EMDB-54764: Echovirus 18 particle missing one pentamer in situ, asymmetric reconstruction
Method: EM (single particle) / Resolution: 8.9 Å

EMDB-54765: Echovirus 18 particle missing three pentamers in situ, asymmetric reconstruction
Method: EM (single particle) / Resolution: 18.1 Å

EMDB-55096, PDB-9spu:
Echovirus 18 particle missing one pentamer in situ, symmetrized reconstruction (C5)
Method: EM (single particle) / Resolution: 6.5 Å

EMDB-55863, PDB-9tf0:
Structure of echovirus 18 in complex with neonatal Fc receptor
Method: EM (single particle) / Resolution: 2.26 Å

EMDB-55864, PDB-9tf1:
Structure of echovirus 18, activated particle
Method: EM (single particle) / Resolution: 2.44 Å

EMDB-55865, PDB-9tf2:
Structure of echovirus 18, empty particle
Method: EM (single particle) / Resolution: 2.86 Å

Chemicals

ChemComp-PLM:
PALMITIC ACID

ChemComp-HOH:
WATER

Source
  • echovirus e18
  • homo sapiens (human)
KeywordsVIRUS / in situ structure / Assembly

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