[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,327 items for (author: alexander & m)

EMDB-51139:
human 80S ribosome bound by a SKI2-exosome complex (60S signal subtracted)
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-51132:
human 80S ribosome bound by a SKI2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8m:
human 80S ribosome bound by a SKI2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-43109:
Asymmetric unit of bacteriophage PhiM1 mature capsid
Method: single particle / : Eruera A, Hodgkinson-Bean J

EMDB-43110:
C4 pre-infection ejectosome of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

EMDB-43111:
Pectobacterium phage PhiM1 ejectosome C8 map
Method: single particle / : Eruera A, Hodgkinson-Bean J

EMDB-43112:
C12 portal and adaptor complex of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

EMDB-43127:
C6 nozzle and fibre complex of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

EMDB-43132:
Asymmetric composite map of Pectobacterium phage PhiM1
Method: single particle / : Eruera A, Hodgkinson-Bean J

EMDB-43135:
Pectobacterium phage PhiM1 D12 capsid dimer map
Method: single particle / : Eruera A, Hodgkinson-Bean J

EMDB-46790:
Asymmetric reconstruction of the PhiM1 tail and ejectosome complexes.
Method: single particle / : Hodgkinson-Bean J, Eruera A

PDB-8vb0:
Asymmetric unit of bacteriophage PhiM1 mature capsid
Method: single particle / : Eruera A, Hodgkinson-Bean J

PDB-8vb2:
C4 pre-infection ejectosome of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

PDB-8vb4:
C12 portal and adaptor complex of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

PDB-8vbx:
C6 nozzle and fibre complex of the mature bacteriophage PhiM1 particle
Method: single particle / : Hodgkinson-Bean J, Eruera A

EMDB-51133:
80S-bound human Ski2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-51134:
human 40S ribosome bound by a SKI238-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-51135:
40S-bound human SKI2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-51136:
40S-bound human SKI238 complex in the open state (Gatekeeping module)
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-51137:
human SKI7-SKI238 complex in the open state
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8n:
80S-bound human Ski2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8o:
human 40S ribosome bound by a SKI238-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8p:
40S-bound human SKI2-exosome complex
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8q:
40S-bound human SKI238 complex in the open state (Gatekeeping module)
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

PDB-9g8r:
human SKI7-SKI238 complex in the open state
Method: single particle / : Koegel A, Keidel A, Loukeri MJ, Kuhn CC, Langer LM, Schaefer IB, Conti E

EMDB-43912:
Subtomogram average of the HN-F complex on the viral surface of an HPIV3 escape variant mutation (F-L234F).
Method: subtomogram averaging / : Marcink TC, Moscona A

EMDB-43913:
Subtomogram average of the HN-F complex on the viral surface of an HPIV3 escape variant (EV2).
Method: subtomogram averaging / : Marcink TC, Moscona A

EMDB-43914:
Subtomogram average of the HN-F complex on the viral surface of an HPIV3 escape variant (EV1).
Method: subtomogram averaging / : Marcink TC, Moscona A

EMDB-44812:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

PDB-9bqj:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

EMDB-41612:
Cryo-EM structure of the inner MKLN1 dimer from an autoinhibited MKLN1 tetramer
Method: single particle / : Chana CK, Keszei AFA, Sicheri F

EMDB-45088:
Cryo-EM structure of an autoinhibited MKLN1 tetramer
Method: single particle / : Chana CK, Keszei AFA, Sicheri F

EMDB-45138:
Cryo-EM structure of CTLH-MKLN1-FAM72A in complex with UNG2
Method: single particle / : Chana CK, Keszei AFA, Sicheri F

EMDB-45186:
Cryo-EM structure of a FAM72A-MKLN1-RANBP9-TWA1 complex
Method: single particle / : Chana CK, Keszei AFA, Sicheri F

PDB-8ttq:
Cryo-EM structure of the inner MKLN1 dimer from an autoinhibited MKLN1 tetramer
Method: single particle / : Chana CK, Keszei AFA, Sicheri F

EMDB-42247:
Degrader-induced complex between PTPN2 and CRBN-DDB1
Method: single particle / : Catalano C, Bratkowski M, Scapin G, Hao Q

PDB-8uh6:
Degrader-induced complex between PTPN2 and CRBN-DDB1
Method: single particle / : Catalano C, Bratkowski M, Scapin G, Hao Q

EMDB-19412:
hCD8_Darpin-AAV2
Method: single particle / : Chlanda P, Buchholz CJ

EMDB-19415:
Cryo-ET of hCD8-AAV2-VP1/2/31/1sL particles generated with a 1:1 ratio of unmodified VP2/3 and 63A4-inserted VP1/2/3
Method: electron tomography / : Chlanda P, Buchholz CJ

EMDB-18946:
Cryo-EM structure of the FIGNL1 AAA hexamer bound to RAD51
Method: single particle / : Carver A, Yates LA, Zhang X

PDB-8r64:
Cryo-EM structure of the FIGNL1 AAA hexamer bound to RAD51
Method: single particle / : Carver A, Yates LA, Zhang X

EMDB-41495:
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: cis-oriented 1B2 and ACP
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

EMDB-41496:
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: trans-oriented 1B2 and ACP
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

PDB-8tpw:
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: cis-oriented 1B2 and ACP
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

PDB-8tpx:
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 3 in complex with antibody fragment 1B2: trans-oriented 1B2 and ACP
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

EMDB-43139:
SARS-CoV-2 Spike S2 bound to Fab 54043-5
Method: single particle / : Johnson NV, McLellan JS

PDB-8vcr:
SARS-CoV-2 Spike S2 bound to Fab 54043-5
Method: single particle / : Johnson NV, McLellan JS

EMDB-41355:
KS-AT core of 6-deoxyerythronolide B synthase (DEBS) Module 3 crosslinked with its translocation ACP partner of Module 2
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

PDB-8tko:
KS-AT core of 6-deoxyerythronolide B synthase (DEBS) Module 3 crosslinked with its translocation ACP partner of Module 2
Method: single particle / : Cogan DP, Soohoo AM, Chen M, Brodsky KL, Liu Y, Khosla C

EMDB-44232:
GluA2 flip Q in complex with TARPgamma2 at pH8, consensus structure of LBD-TMD-TARPgamma2
Method: single particle / : Nakagawa T, Greger IH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more