[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 92 items for (author: hou & ym)

EMDB-19767:
Structure of a 2873 Scaffold Base DNA Origami V1
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19769:
Structure of a 2873 Scaffold Base DNA Origami V2
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19770:
Structure of a 2873 Scaffold Base DNA Origami V3
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19775:
Structure of a 1033 Scaffold Base DNA Origami Nanostructure V4 with Desalted Purified Staples
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19776:
Structure of a 1033 Scaffold Base DNA Origami Nanostructure V4 with HPLC Purified Staples
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19867:
Cryo-EM Structure of a 1033 Scaffold Base DNA Origami Nanostructure V4 and TBA
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19874:
Refinement Focused on the 1st Body of a 1033 Scaffold-Based DNA Origami Nanostructure V4 with TBA
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19875:
Refinement Focused on the 2nd Body of a 1033 Scaffold-Based DNA Origami Nanostructure V4 with TBA
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-19876:
Refinement Focused on the 3rd Body of a 1033 Scaffold-Based DNA Origami Nanostructure V4 with TBA
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

PDB-9eoq:
Cryo-EM Structure of a 1033 Scaffold Base DNA Origami Nanostructure V4 and TBA
Method: single particle / : Ali K, Georg K, Volodymyr M, Johanna G, Maximilian NH, Lukas K, Simone C, Hendrik D

EMDB-41363:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-36229:
CryoEM structure of Gi-coupled MRGPRX1 with peptide agonist CNF-Tx2
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-36232:
CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-36233:
CryoEM structure of Gi-coupled MRGPRX1 with peptide agonist BAM8-22
Method: single particle / : Sun JP, Xu HE, Yang F, Liu ZM, Guo LL, Zhang YM, Fang GX, Tie L, Zhuang YM, Xue CY

EMDB-36076:
Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class2
Method: single particle / : Yang GH, Zhang YM, Zhou JQ, Jia YT, Xu X, Fu P, Wu HY

EMDB-36077:
Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class1
Method: single particle / : Yang GH, Zhang YM, Zhou JQ, Jia YT, Xu X, Fu P, Wu HY

EMDB-16432:
HSF2BP-BRCA2 ring-shaped complex
Method: single particle / : Zinn-Justin S, Ghouil R, Miron S, Legrand P, Ouldali M, Winter JM, Ropars V, Arteni AA

EMDB-29397:
Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
Method: single particle / : Majumdar S, Sharma MR, Manjari SR, Banavali NK, Agrawal RK

EMDB-34806:
SARS-CoV-2 Delta Spike in complex with FP-12A
Method: single particle / : Chen X, Wu YM

EMDB-34807:
SARS-CoV-2 Delta Spike in complex with IS-9A
Method: single particle / : Mohapatra A, Wu YM

EMDB-34808:
SARS-CoV-2 Omicron BA.1 Spike in complex with IY-2A
Method: single particle / : Chen X, Mohapatra A, Wu YM

EMDB-24628:
Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual
Method: single particle / : Chen Y, Pozharski E

PDB-7rq6:
Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual
Method: single particle / : Chen Y, Pozharski E, Tolbert WD, Pazgier M

EMDB-32832:
SARS-CoV-2 Spike in complex with Fab of m31A7
Method: single particle / : Wu YM, Chen X

EMDB-32825:
Negative stain volume of the mono-GlcNAc-decorated SARS-CoV-2 Spike
Method: single particle / : Chen X, Huang HY

EMDB-25405:
Late translocation intermediate with EF-G partially dissociated (Structure V)
Method: single particle / : Carbone CE, Loveland AB, Gamper HB, Hou Y, Korostelev AA

EMDB-25407:
Mid translocation intermediate with EF-G bound with GDP (Structure IV)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25409:
Pre translocation intermediate with EF-G bound to GDP and Pi (Structure III)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25410:
Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25411:
Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25415:
Late translocation intermediate with EF-G dissociated (Structure VI)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25418:
Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25420:
Pre translocation, non-rotated 70S ribosome (Structure I)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-25421:
Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)
Method: single particle / : Carbone CE, Korostelev AA

EMDB-23961:
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Method: single particle / : Cui Z, Zhang J

EMDB-23962:
Mtb 70SIC in complex with MtbEttA at Pre_R1 state
Method: single particle / : Cui Z, Zhang J

EMDB-23969:
Mtb 70SIC in complex with MtbEttA at Trans_R0 state
Method: single particle / : Cui Z, Zhang J

EMDB-23972:
Mtb 70SIC in complex with MtbEttA at Trans_R1 state
Method: single particle / : Cui Z, Zhang J

EMDB-23974:
Mtb 70S initiation complex
Method: single particle / : Cui Z, Zhang J

EMDB-23975:
Mtb 70S with P/E tRNA
Method: single particle / : Cui Z, Zhang J

EMDB-23976:
Mtb 70S with P and E site tRNAs
Method: single particle / : Cui Z, Zhang J

EMDB-23981:
Mtb 50S
Method: single particle / : Cui Z, Zhang J

EMDB-30860:
Structural basis of ligand selectivity conferred by the human glucose-dependent insulinotropic polypeptide receptor
Method: single particle / : Zhao FH, Zhang C, Zhou QT, Hang KN, Zou XY, Chen Y, Wu F, Rao QD, Dai AT, Yin WC, Shen DD, Zhang Y, Xia T, Stevens RC, Xu HE, Yang DH, Zhao LH, Wang MW

PDB-7dty:
Structural basis of ligand selectivity conferred by the human glucose-dependent insulinotropic polypeptide receptor
Method: single particle / : Zhao FH, Zhang C, Zhou QT, Hang KN, Zou XY, Chen Y, Wu F, Rao QD, Dai AT, Yin WC, Shen DD, Zhang Y, Xia T, Stevens RC, Xu HE, Yang DH, Zhao LH, Wang MW

EMDB-22669:
Cryo-EM map of pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Method: single particle / : Demo G, Loveland AB

EMDB-22670:
Cryo-EM map of mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)
Method: single particle / : Demo G, Loveland AB

EMDB-22671:
Cryo-EM map of near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
Method: single particle / : Demo G, Loveland AB

EMDB-22672:
Cryo-EM map of pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
Method: single particle / : Demo G, Loveland AB

EMDB-22673:
Cryo-EM of mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
Method: single particle / : Demo G, Loveland AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more