Author results

1CRC
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CYTOCHROME C AT LOW IONIC STRENGTH
Descriptor:CYTOCHROME C, PROTOPORPHYRIN IX CONTAINING FE
Authors:Sanishvili, R., Volz, K.W., Westbrook, E.M., Margoliash, E.
Deposit date:1995-03-22
Release date:1996-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The low ionic strength crystal structure of horse cytochrome c at 2.1 A resolution and comparison with its high ionic strength counterpart.
Structure, 3, 1995
1M3S
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CRYSTAL STRUCTURE OF YCKF FROM BACILLUS SUBTILIS
Descriptor:Hypothetical protein yckf
Authors:Sanishvili, R., Wu, R., Kim, D.E., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-28
Release date:2003-01-21
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Bacillus subtilis YckF: structural and functional evolution.
J.Struct.Biol., 148, 2004
1M33
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CRYSTAL STRUCTURE OF BIOH AT 1.7 A
Descriptor:BioH protein, 3-HYDROXY-PROPANOIC ACID, 1,2-ETHANEDIOL
Authors:Sanishvili, R., Savchenko, A., Skarina, T., Edwards, A., Joachimiak, A., Yakunin, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-26
Release date:2003-01-21
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.
J.Biol.Chem., 278, 2003
1MKZ
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CRYSTAL STRUCTURE OF MOAB PROTEIN AT 1.6 A RESOLUTION.
Descriptor:Molybdenum cofactor biosynthesis protein B, SULFATE ION, ACETIC ACID
Authors:Sanishvili, R., Skarina, T., Joachimiak, A., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-08-29
Release date:2003-04-22
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of Escherichia coli MoaB suggests a probable role in molybdenum cofactor synthesis.
J.Biol.Chem., 279, 2004
1NIG
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2.0 A STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION FROM THERMOPLASMA ACIDOPHILUM
Descriptor:hypothetical protein TA1238
Authors:Sanishvili, R., Edwards, A., Christendat, D., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the hypothetical protein TA1238 from Thermoplasma acidophilum: a new type of helical super-bundle.
J.STRUCT.FUNCT.GENOM., 5, 2004
1NI9
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2.0 A STRUCTURE OF GLYCEROL METABOLISM PROTEIN FROM E. COLI
Descriptor:Protein glpX, SULFATE ION
Authors:Sanishvili, R., Brunzelle, J., Savchenko, A., Edwards, A.M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-12-23
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Characterization of the Type II Fructose-1,6-bisphosphatase GlpX from Escherichia coli.
J.Biol.Chem., 284, 2009
1K7K
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CRYSTAL STRUCTURE OF RDGB- INOSINE TRIPHOSPHATE PYROPHOSPHATASE FROM E. COLI
Descriptor:Hypothetical protein yggV
Authors:Sanishvili, R., Joachimiak, A., Edwards, A., Savchenko, A., Skarina, T., Midwest Center for Structural Genomics (MCSG)
Deposit date:2001-10-19
Release date:2002-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
2OBZ
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CRYSTAL STRUCTURE OF THE THE BROMINATED Z-DNA DUPLEX D(CGCG[BRU]G)
Descriptor:5'-D(*CP*GP*CP*GP*(BRU)P*G)-3'
Authors:Schiltz, M., Sanishvili, R.
Deposit date:2006-12-20
Release date:2007-12-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Polarisation-dependence of anomalous scattering in brominated DNA and RNA molecules, and importance of crystal orientation in SAD and MAD phasing
To be Published
1DPL
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A-DNA DECAMER GCGTA(T23)TACGC WITH INCORPORATED 2'-METHOXY-3'-METHYLENEPHOSPHATE-THYMIDINE
Descriptor:5'-D(*GP*CP*GP*TP*AP*(T23)P*AP*CP*GP*C)-3', MAGNESIUM ION, SPERMINE
Authors:Egli, M., Tereshko, V., Teplova, M., Minasov, G., Joachimiak, A., Sanishvili, R., Weeks, C.M., Miller, R., Maier, M.A., An, H., Dan Cook, P., Manoharan, M.
Deposit date:1999-12-27
Release date:2000-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution.
Biopolymers, 48, 1998
1DPN
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B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE
Descriptor:DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Egli, M., Tereshko, V., Teplova, M., Minasov, G., Joachimiak, A., Sanishvili, R., Weeks, C.M., Miller, R., Maier, M.A., An, H., Dan Cook, P., Manoharan, M.
Deposit date:1999-12-27
Release date:2000-04-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution.
Biopolymers, 48, 1998
4Y0I
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GABA-AMINOTRANSFERASE INACTIVATED BY CONFORMATIONALLY-RESTRICTED INACTIVATOR
Descriptor:4-aminobutyrate aminotransferase, mitochondrial, 4-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]THIOPHENE-2-CARBOXYLIC ACID, ...
Authors:Wu, R., Sanishvili, R., Lee, H.V., Dustin, D.H., Emma, D., Neil, K., Silverman, R.B., Liu, D.
Deposit date:2015-02-06
Release date:2016-02-17
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.662 Å)
Cite:GABA-aminotransferase inactivated by conformationally-restricted inactivator
To Be Published
4ZSW
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PIG BRAIN GABA-AT INACTIVATED BY (E)-(1S,3S)-3-AMINO-4-FLUOROMETHYLENYL-1-CYCLOPENTANOIC ACID
Descriptor:4-aminobutyrate aminotransferase, mitochondrial, 4FE-2S-O HYBRID CLUSTER, ...
Authors:Wu, R., Lee, H., Le, H.V., Doud, E., Sanishvili, R., Compton, P., Kelleher, N.L., Silverman, R.B., Liu, D.
Deposit date:2015-05-14
Release date:2015-07-08
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid.
Acs Chem.Biol., 10, 2015
4ZSY
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PIG BRAIN GABA-AT INACTIVATED BY (Z)-(1S,3S)-3-AMINO-4-FLUOROMETHYLENYL-1-CYCLOPENTANOIC ACID.
Descriptor:4-aminobutyrate aminotransferase, mitochondrial, 4FE-2S-O HYBRID CLUSTER, ...
Authors:Wu, R., Lee, H., Le, H.V., Doud, E., Sanishvili, R., Compton, P., Kelleher, N.L., Silverman, R.B., Liu, D.
Deposit date:2015-05-14
Release date:2015-07-08
Last modified:2015-09-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of Inactivation of GABA Aminotransferase by (E)- and (Z)-(1S,3S)-3-Amino-4-fluoromethylenyl-1-cyclopentanoic Acid.
Acs Chem.Biol., 10, 2015
5T4J
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PLP AND GABA TRIGGER GABR-MEDIATED TRANSCRIPTION REGULATION IN BACILLUS SUBSIDIES VIA EXTERNAL ALDIMINE FORMATION
Descriptor:HTH-type transcriptional regulatory protein GabR, PYRIDOXAL-5'-PHOSPHATE, GAMMA-AMINO-BUTANOIC ACID
Authors:Wu, R., Sanishvili, R., Belitsky, B.R., Juncosa, J.I., Le, H.V., Lehrer, H.J.S., Farley, M., Silverman, R.B., Petsko, G.A., Ringe, D., Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.231 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5T4K
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PLP AND GABA TRIGGER GABR-MEDIATED TRANSCRIPTION REGULATION IN BACILLUS SUBSIDIES VIA EXTERNAL ALDIMINE FORMATION
Descriptor:HTH-type transcriptional regulatory protein GabR, (4S)-5-fluoro-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid
Authors:Wu, R., Sanishvili, R., Belitsky, B.R., Juncosa, J.I., Le, H.V., Lehrer, H.J.S., Farley, M., Silverman, R.B., Petsko, G.A., Ringe, D., Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.245 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5T4L
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PLP AND GABA TRIGGER GABR-MEDIATED TRANSCRIPTION REGULATION IN BACILLUS SUBSIDIES VIA EXTERNAL ALDIMINE FORMATION
Descriptor:Aspartate aminotransferase, (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid
Authors:Wu, R., Sanishvili, R., Belitsky, B.R., Juncosa, J.I., Le, H.V., Lehrer, H.J.S., Farley, M., Silverman, R.B., Petsko, G.A., Ringe, D., Liu, D.
Deposit date:2016-08-29
Release date:2017-03-29
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2O4H
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HUMAN BRAIN ASPARTOACYLASE COMPLEX WITH INTERMEDIATE ANALOG (N-PHOSPHONOMETHYL-L-ASPARTATE)
Descriptor:Aspartoacylase, ZINC ION, N-[HYDROXY(METHYL)PHOSPHORYL]-L-ASPARTIC ACID
Authors:Le Coq, J., Pavlovsky, A., Sanishvili, R., Viola, R.E.
Deposit date:2006-12-04
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue.
Biochemistry, 47, 2008
2O53
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CRYSTAL STRUCTURE OF APO-ASPARTOACYLASE FROM HUMAN BRAIN
Descriptor:Aspartoacylase, ZINC ION, PHOSPHATE ION
Authors:Le Coq, J., Pavlovsky, A., Sanishvili, R., Viola, R.E.
Deposit date:2006-12-05
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue.
Biochemistry, 47, 2008
1SRV
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THERMUS THERMOPHILUS GROEL (HSP60 CLASS) FRAGMENT (APICAL DOMAIN) COMPRISING RESIDUES 192-336
Descriptor:PROTEIN (GROEL (HSP60 CLASS))
Authors:Walsh, M.A., Dementieva, I., Evans, G., Sanishvili, R., Joachimiak, A.
Deposit date:1999-03-02
Release date:1999-03-12
Last modified:2019-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Taking MAD to the extreme: ultrafast protein structure determination.
Acta Crystallogr.,Sect.D, 55, 1999
1CS7
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SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER
Descriptor:5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3', STRONTIUM ION
Authors:Lewis, F.D., Liu, X., Wu, Y., Miller, S.E., Wasielewski, M.R., Letsinger, R.L., Sanishvili, R., Joachimiak, A., Tereshko, V., Egli, M.
Deposit date:1999-08-17
Release date:2001-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers
J.Am.Chem.Soc., 121, 1999
1D8X
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CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G A BASE PAIRS
Descriptor:5'-D(*CP*CP*GP*AP*AP*TP*GP*AP*GP*G)-3', MAGNESIUM ION, COBALT HEXAMMINE(III)
Authors:Gao, Y.-G., Robinson, H., Sanishvili, R., Joachimiak, A., Wang, A.H.-J.
Deposit date:1999-10-26
Release date:1999-11-05
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure and recognition of sheared tandem G x A base pairs associated with human centromere DNA sequence at atomic resolution.
Biochemistry, 38, 1999
1D9R
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CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRS
Descriptor:5'-D(*CP*CP*GP*AP*AP*(BRU)P*GP*AP*GP*G)-3', COBALT HEXAMMINE(III)
Authors:Gao, Y.-G., Robinson, H., Sanishvili, R., Joachimiak, A., Wang, A.H.-J.
Deposit date:1999-10-29
Release date:1999-11-05
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and recognition of sheared tandem G x A base pairs associated with human centromere DNA sequence at atomic resolution.
Biochemistry, 38, 1999
1DCR
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CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRS
Descriptor:5'-D(*CP*CP*GP*AP*AP*(BRU)P*GP*AP*GP*G)-3', SPERMINE, MAGNESIUM ION, ...
Authors:Gao, Y.-G., Robinson, H., Sanishvili, R., Joachimiak, A., Wang, A.H.-J.
Deposit date:1999-11-05
Release date:1999-11-19
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and recognition of sheared tandem G x A base pairs associated with human centromere DNA sequence at atomic resolution.
Biochemistry, 38, 1999
1DNO
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A-DNA/RNA DODECAMER R(GCG)D(TATACGC) MG BINDING SITES
Descriptor:DNA/RNA (5'-R(*GP*CP*GP)-D(*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H., Gao, Y.-G., Sanishvili, R., Joachimiak, A., Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
1DNT
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RNA/DNA DODECAMER R(GC)D(GTATACGC) WITH MAGNESIUM BINDING SITES
Descriptor:DNA/RNA (5'-R(*GP*CP)-D(*GP*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H., Gao, Y.-G., Sanishvili, R., Joachimiak, A., Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
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