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4XKA
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BU of 4xka by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in hexagonal form with glycerol
Descriptor: GLYCEROL, Heat shock cognate 90 kDa protein, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Raman, S, Suguna, K.
Deposit date:2015-01-10
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XD8
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BU of 4xd8 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ANP
Descriptor: Heat shock cognate 90 kDa protein, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-19
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XKO
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BU of 4xko by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in hexagonal form with PEG
Descriptor: DI(HYDROXYETHYL)ETHER, Heat shock cognate 90 kDa protein, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Raman, S, Suguna, K.
Deposit date:2015-01-12
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.455 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
6O3B
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BU of 6o3b by Molmil
Crystal structure of Frizzled 7 CRD in complex with F6 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab F6, Heavy chain, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O3A
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BU of 6o3a by Molmil
Crystal structure of Frizzled 7 CRD in complex with F7.B Fab
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O39
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BU of 6o39 by Molmil
Crystal structure of Frizzled 5 CRD in complex with F2.I Fab
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Raman, S, Beilschmidt, M, Fransson, J, Julien, J.P.
Deposit date:2019-02-26
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-guided design fine-tunes pharmacokinetics, tolerability, and antitumor profile of multispecific frizzled antibodies.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6WJL
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BU of 6wjl by Molmil
Crystal structure of Glypican-2 core protein in complex with D3 Fab
Descriptor: D3 Fab Heavy chain, D3 Fab Light Chain, Glypican-2, ...
Authors:Raman, S, Maris, J.M, Bosse, K.R, Julien, J.P.
Deposit date:2020-04-14
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A GPC2 antibody-drug conjugate is efficacious against neuroblastoma and small-cell lung cancer via binding a conformational epitope.
Cell Rep Med, 2, 2021
4XCL
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BU of 4xcl by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with AGS
Descriptor: Heat shock cognate 90 kDa protein, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-18
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XC0
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BU of 4xc0 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ACP
Descriptor: DI(HYDROXYETHYL)ETHER, Heat shock cognate 90 kDa protein, MAGNESIUM ION, ...
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-17
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4X9L
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BU of 4x9l by Molmil
N-terminal domain of Heat shock protein 90 from Oryza sativa
Descriptor: Heat shock protein, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, TETRAETHYLENE GLYCOL
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-11
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Functional characterization of heat-shock protein 90 from Oryza sativa and crystal structure of its N-terminal domain.
Acta Crystallogr.,Sect.F, 71, 2015
4XCJ
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BU of 4xcj by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock cognate 90 kDa protein, MAGNESIUM ION
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-18
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XDM
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BU of 4xdm by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with Geldanamycin
Descriptor: DI(HYDROXYETHYL)ETHER, GELDANAMYCIN, Heat shock cognate 90 kDa protein
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-19
Release date:2015-12-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90
Sci Rep, 5, 2015
4XE2
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BU of 4xe2 by Molmil
N-terminal domain of Hsp90 from Dictyostelium discoideum in complex with peptide
Descriptor: Heat shock cognate 90 kDa protein
Authors:Raman, S, Suguna, K.
Deposit date:2014-12-22
Release date:2015-12-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90.
Sci Rep, 5, 2015
3KNX
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BU of 3knx by Molmil
HCV NS3 protease domain with P1-P3 macrocyclic ketoamide inhibitor
Descriptor: (2R)-2-{(3S,13S,16aS,17aR,17bS)-13-[({(1S)-1-[(4,4-dimethyl-2,6-dioxopiperidin-1-yl)methyl]-2,2-dimethylpropyl}carbamoyl)amino]-17,17-dimethyl-1,14-dioxooctadecahydro-2H-cyclopropa[3,4]pyrrolo[1,2-a][1,4]diazacyclohexadecin-3-yl}-2-hydroxy-N-prop-2-en-1-ylethanamide, BETA-MERCAPTOETHANOL, HCV NS3 Protease, ...
Authors:Venkatraman, S, Velazquez, F, Wu, W, Blackman, M, Chen, K.X, Bogen, S, Nair, L, Tong, X, Chase, R, Hart, A, Agrawal, S, Pichardo, J, Prongay, A, Cheng, K.-C, Girijavallabhan, V, Piwinski, J, Shih, N.-Y, Njoroge, F.G.
Deposit date:2009-11-12
Release date:2010-10-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Discovery and structure-activity relationship of P1-P3 ketoamide derived macrocyclic inhibitors of hepatitis C virus NS3 protease.
J.Med.Chem., 52, 2009
1Z0H
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BU of 1z0h by Molmil
N-terminal helix reorients in recombinant C-fragment of Clostridium botulinum type B
Descriptor: Botulinum neurotoxin type B
Authors:Jayaraman, S, Eswarmoorthy, S, Ashraf, S.A, Smith, L.A, Swaminathan, S.
Deposit date:2005-03-01
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:N-terminal helix reorients in recombinant C-fragment of Clostridium botulinum type B.
Biochem.Biophys.Res.Commun., 330, 2005
1YXW
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BU of 1yxw by Molmil
A common binding site for disialyllactose and a tri-peptide in the C-fragment of tetanus neurotoxin
Descriptor: GLUTAMIC ACID, TRYPTOPHAN, TYROSINE, ...
Authors:Jayaraman, S, Eswaramoorthy, S, Kumaran, D, Swaminathan, S.
Deposit date:2005-02-22
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Common binding site for disialyllactose and tri-peptide in C-fragment of tetanus neurotoxin
Proteins, 61, 2005
2F9U
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BU of 2f9u by Molmil
HCV NS3 protease domain with NS4a peptide and a ketoamide inhibitor with a P2 norborane
Descriptor: 1,1-DIMETHYLETHYL [1-CYCLOHEXYL-2-[3-[[[1-[2-[[2-[[2-(DIMETHYLAMINO)-2-OXO-1-PHENYLETHYL]AMINO]-2-OXOETHYL]AMINO]-1,2-DIOXOETHYL]PENTYL]AMINO]CARBONYL]-2-AZABICYCLO[2.2.1]HEPTAN-2-YL]-2-OXOETHYL]CARBAMATE, NS3 protease/helicase', ZINC ION, ...
Authors:Venkatraman, S, Njoroge, F.G, Wu, W, Girijavallabhan, V, Prongay, A.J, Butkiewicz, N, Pichardo, J.
Deposit date:2005-12-06
Release date:2006-06-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Novel Inhibitors of Hepatitis C NS3-NS4A Serine Protease Derived from 2-Aza-bicyclo[2.2.1]heptane-3-carboxylic acid.
Bioorg.Med.Chem.Lett., 16, 2006
8ELD
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BU of 8eld by Molmil
Bacteriophage HRP29 Icosohedral Reconstruction
Descriptor: Gp37, Gp47, Gp48
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-09-23
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
8EM6
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BU of 8em6 by Molmil
Bacteriophage HRP29 Procapsid Icosohedral Reconstruction
Descriptor: Gp37
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-09-26
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
8ES4
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BU of 8es4 by Molmil
Focused reconstruction of HRP29 tail
Descriptor: Gp35, Gp39, Gp40, ...
Authors:Subramanian, S, Bergland Drarvik, S.M, Parent, K.N.
Deposit date:2022-10-13
Release date:2023-10-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Shigella bacteriophage HRP29
To Be Published
5VX6
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BU of 5vx6 by Molmil
Structure of Bacillus subtilis Inhibitor of motility (MotI/DgrA)
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Uncharacterized protein YpfA
Authors:Subramanian, S, Dann III, C.
Deposit date:2017-05-23
Release date:2017-11-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.197 Å)
Cite:MotI (DgrA) acts as a molecular clutch on the flagellar stator protein MotA inBacillus subtilis.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1FBK
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BU of 1fbk by Molmil
CRYSTAL STRUCTURE OF CYTOPLASMICALLY OPEN CONFORMATION OF BACTERIORHODOPSIN
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Subramaniam, S, Henderson, R.
Deposit date:2000-07-15
Release date:2000-08-09
Last modified:2021-11-03
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.
Nature, 406, 2000
1FBB
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BU of 1fbb by Molmil
CRYSTAL STRUCTURE OF NATIVE CONFORMATION OF BACTERIORHODOPSIN
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Subramaniam, S, Henderson, R.
Deposit date:2000-07-15
Release date:2000-08-09
Last modified:2018-02-28
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.
Nature, 406, 2000
6AIE
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BU of 6aie by Molmil
Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
Descriptor: Putative methyltransferase
Authors:Venkataraman, S, Dhankar, A, Sinha, K.M, Manivasakan, P, Iqbal, N, Singh, T.P, Prasad, B.V.L.S.
Deposit date:2018-08-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of a new form of RsmD-like RNA methyl transferase from Mycobacterium tuberculosis determined at 1.74 A resolution
To Be Published
3CJI
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BU of 3cji by Molmil
Structure of Seneca Valley Virus-001
Descriptor: CALCIUM ION, Polyprotein
Authors:Venkataraman, S, Reddy, V.S.
Deposit date:2008-03-13
Release date:2008-12-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Seneca Valley Virus-001: an oncolytic picornavirus representing a new genus
Structure, 16, 2008

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