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1B7D
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BU of 1b7d by Molmil
NEUROTOXIN (TS1) FROM BRAZILIAN SCORPION TITYUS SERRULATUS
Descriptor: PHOSPHATE ION, PROTEIN (NEUROTOXIN TS1)
Authors:Polikarpov, I, Sanches Jr, M.S, Marangoni, S, Toyama, M.H, Teplyakov, A.
Deposit date:1999-01-21
Release date:1999-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure of neurotoxin Ts1 from Tityus serrulatus provides insights into the specificity and toxicity of scorpion toxins.
J.Mol.Biol., 290, 1999
8GF3
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BU of 8gf3 by Molmil
Crystallographic structure from BlMan5_7
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GH5 Mannanase, ...
Authors:Briganti, L, Araujo, E.A, Polikarpov, I.
Deposit date:2023-03-07
Release date:2024-04-17
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Unravelling biochemical and structural features of Bacillus licheniformis GH5 mannanase using site-directed mutagenesis and high-resolution protein crystallography studies.
Int.J.Biol.Macromol., 274, 2024
4CI4
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BU of 4ci4 by Molmil
Structural basis for GL479 a dual Peroxisome Proliferator-Activated Receptor alpha agonist
Descriptor: 2-methyl-2-[4-[2-[4-[(E)-phenyldiazenyl]phenoxy]ethyl]phenoxy]propanoic acid, PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR ALPHA
Authors:Santos, J.C, Bernardes, A, Polikarpov, I.
Deposit date:2013-12-05
Release date:2014-12-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Different binding and recognition modes of GL479, a dual agonist of Peroxisome Proliferator-Activated Receptor alpha / gamma.
J. Struct. Biol., 191, 2015
1QLR
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BU of 1qlr by Molmil
CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF A HUMAN MONOCLONAL IgM COLD AGGLUTININ
Descriptor: IGM FAB REGION IV-J(H4)-C (KAU COLD AGGLUTININ), IGM KAPPA CHAIN V-III (KAU COLD AGGLUTININ), alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Carvalho, J.G, Cauerhff, A, Goldbaum, F, Leoni, J, Polikarpov, I.
Deposit date:1999-09-11
Release date:2000-09-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Three-dimensional structure of the Fab from a human IgM cold agglutinin.
J Immunol., 165, 2000
4USC
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BU of 4usc by Molmil
Crystal structure of peroxidase from palm tree Chamaerops excelsa
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Bernardes, A, Santos, J.C, Textor, L.C, Cuadrado, N.H, Kostetsky, E.Y, Roig, M.G, Muniz, J.R.C, Shnyrov, V.L, Polikarpov, I.
Deposit date:2014-07-07
Release date:2015-05-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure Analysis of Peroxidase from the Palm Tree Chamaerops Excelsa.
Biochimie, 111, 2015
8UWS
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BU of 8uws by Molmil
Cryo-EM structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43
Descriptor: Beta-xylosidase, CALCIUM ION
Authors:Briganti, L, Godoy, A.S, Capetti, C.C.M, Portugal, R.V, Polikarpov, I.
Deposit date:2023-11-08
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Cryo-EM structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43
To Be Published
4LNW
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BU of 4lnw by Molmil
Crystal structure of TR-alpha bound to T3 in a second site
Descriptor: 3,5,3'TRIIODOTHYRONINE, Thyroid hormone receptor alpha
Authors:Puhl, A.C, Aparicio, R, Polikarpov, I.
Deposit date:2013-07-12
Release date:2014-03-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of a new hormone-binding site on the surface of thyroid hormone receptor.
Mol.Endocrinol., 28, 2014
4LNX
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BU of 4lnx by Molmil
Crystal structure of TR-alpha bound to T4 in a second site
Descriptor: 3,5,3',5'-TETRAIODO-L-THYRONINE, 3,5,3'TRIIODOTHYRONINE, Thyroid hormone receptor alpha
Authors:Puhl, A.C, Aparicio, R, Polikarpov, I.
Deposit date:2013-07-12
Release date:2014-03-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Identification of a new hormone-binding site on the surface of thyroid hormone receptor.
Mol.Endocrinol., 28, 2014
4UZS
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BU of 4uzs by Molmil
Crystal structure of Bifidobacterium bifidum beta-galactosidase
Descriptor: BETA-GALACTOSIDASE, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Godoy, A.S, Murakami, M.T, Camilo, C.M, Bernardes, A, Polikarpov, I.
Deposit date:2014-09-08
Release date:2015-09-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal Structure of Beta1-6-Galactosidase from Bifidobacterium Bifidum S17: Trimeric Architecture, Molecular Determinants of the Enzymatic Activity and its Inhibition by Alpah-Galactose.
FEBS J., 283, 2016
3KGU
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BU of 3kgu by Molmil
Wild type human transthyretin (TTR) complexed with genistein (TTRwt:GEN) pH 7.5
Descriptor: GENISTEIN, Transthyretin
Authors:Trivella, D.B, Polikarpov, I.
Deposit date:2009-10-29
Release date:2010-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: implications to tetramer stability and ligand-binding.
J.Struct.Biol., 170, 2010
3KGT
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BU of 3kgt by Molmil
V30M mutant human transthyretin (TTR) complexed with genistein (V30M:GEN) pH 7.5
Descriptor: GENISTEIN, Transthyretin
Authors:Trivella, D.B, Polikarpov, I.
Deposit date:2009-10-29
Release date:2010-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: implications to tetramer stability and ligand-binding.
J.Struct.Biol., 170, 2010
3KGS
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BU of 3kgs by Molmil
V30M mutant human transthyretin (TTR) (apoV30M) pH 7.5
Descriptor: Transthyretin
Authors:Trivella, D.B, Polikarpov, I.
Deposit date:2009-10-29
Release date:2010-03-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational differences between the wild type and V30M mutant transthyretin modulate its binding to genistein: implications to tetramer stability and ligand-binding.
J.Struct.Biol., 170, 2010
6MVI
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BU of 6mvi by Molmil
Apo Cel45A from Neurospora crassa OR74A
Descriptor: Endoglucanase V
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2018-10-25
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A.
Biochimie, 165, 2019
6BUS
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BU of 6bus by Molmil
Extended E2 DNA-binding domain of the Bovine Papillomavirus-1
Descriptor: Regulatory protein E2
Authors:Leroy, L.M.D, Barbosa, J.A.R.G, Polikarpov, I, Pinheiro, C.B.
Deposit date:2017-12-11
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of the extended E2 DNA-binding domain of the bovine papillomavirus-1.
Proteins, 88, 2020
4XTA
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BU of 4xta by Molmil
MECHANISMS OF PPARgamma ACTIVATION BY NON-STEROIDAL ANTI-INFLAMMATORY DRUGS
Descriptor: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, Peroxisome proliferator-activated receptor gamma
Authors:Puhl, A.C, Webb, P, Polikarpov, I.
Deposit date:2015-01-23
Release date:2015-11-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs.
Nucl Recept Signal, 13, 2015
6MVJ
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BU of 6mvj by Molmil
Cellobiose complex Cel45A from Neurospora crassa OR74A
Descriptor: Endoglucanase V, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2018-10-25
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.809 Å)
Cite:Structural insights into the hydrolysis pattern and molecular dynamics simulations of GH45 subfamily a endoglucanase from Neurospora crassa OR74A.
Biochimie, 165, 2019
4XUM
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BU of 4xum by Molmil
PPARgamma ligand binding domain in complex with indomethacin
Descriptor: INDOMETHACIN, Peroxisome proliferator-activated receptor gamma
Authors:Puhl, A.C, Webb, P, Polikarpov, I.
Deposit date:2015-01-26
Release date:2015-11-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs.
Nucl Recept Signal, 13, 2015
6O9N
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BU of 6o9n by Molmil
Structural insights on a new fungal aryl-alcohol oxidase
Descriptor: 1,2-ETHANEDIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kadowaki, M.A.S, Polikarpov, I.
Deposit date:2019-03-14
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Enzymatic versatility and thermostability of a new aryl-alcohol oxidase from Thermothelomyces thermophilus M77.
Biochim Biophys Acta Gen Subj, 1864, 2020
4OJ4
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BU of 4oj4 by Molmil
Crystal structure of V290M PPARgamma mutant in complex with diclofenac
Descriptor: 2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID, CALCIUM ION, Peroxisome proliferator-activated receptor gamma
Authors:Puhl, A.C, Webb, P, Polikarpov, I.
Deposit date:2014-01-20
Release date:2015-02-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a PPAR ligand-resistance syndrome mutant
To be Published
1QFE
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BU of 1qfe by Molmil
THE STRUCTURE OF TYPE I 3-DEHYDROQUINATE DEHYDRATASE FROM SALMONELLA TYPHI
Descriptor: 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE, PROTEIN (3-DEHYDROQUINATE DEHYDRATASE)
Authors:Shrive, A.K, Polikarpov, I, Sawyer, L, Coggins, J.R, Hawkins, A.R.
Deposit date:1999-04-05
Release date:2000-04-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction.
Nat.Struct.Biol., 6, 1999
1QG5
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BU of 1qg5 by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF THE BOVINE BETA-LACTOGLOBULIN (ISOFORM A)
Descriptor: BETA-LACTOGLOBULIN
Authors:Oliveira, K.M.G, Sawyer, L, Polikarpov, I.
Deposit date:1999-04-20
Release date:2001-04-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of bovine beta-lactoglobulin in the orthorhombic space group C222(1). Structural differences between genetic variants A and B and features of the Tanford transition.
Eur.J.Biochem., 268, 2001
1QLL
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BU of 1qll by Molmil
Piratoxin-II (Prtx-II) - a K49 PLA2 from Bothrops pirajai
Descriptor: N-TRIDECANOIC ACID, PHOSPHOLIPASE A2
Authors:Lee, W.-H, Polikarpov, I.
Deposit date:1999-09-01
Release date:2000-09-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural Basis for Low Catalytic Activity in Lys49 Phospholipases A2-A Hypothesis: The Crystal Structure of Piratoxin II Complexed to Fatty Acid
Biochemistry, 40, 2001
8U4F
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BU of 8u4f by Molmil
Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9 in Complex with Cellohexaose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Araujo, E.A, Polikarpov, I.
Deposit date:2023-09-10
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9.
Carbohydr Polym, 329, 2024
8U4A
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BU of 8u4a by Molmil
Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9 in Complex with Cellotriose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Araujo, E.A, Polikarpov, I.
Deposit date:2023-09-10
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9.
Carbohydr Polym, 329, 2024
8U49
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BU of 8u49 by Molmil
The Apo Crystal Structure of BlCel9A from Glycoside Hydrolase Family 9
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Araujo, E.A, Polikarpov, I.
Deposit date:2023-09-10
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular mechanism of cellulose depolymerization by the two-domain BlCel9A enzyme from the glycoside hydrolase family 9.
Carbohydr Polym, 329, 2024

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PDB entries from 2024-09-18

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