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1UL1
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BU of 1ul1 by Molmil
Crystal structure of the human FEN1-PCNA complex
Descriptor: Flap endonuclease-1, MAGNESIUM ION, Proliferating cell nuclear antigen
Authors:Sakurai, S, Kitano, K, Yamaguchi, H, Hamada, K, Okada, K, Fukuda, K, Uchida, M, Ohtsuka, E, Morioka, H, Hakoshima, T.
Deposit date:2003-09-05
Release date:2005-03-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for recruitment of human flap endonuclease 1 to PCNA
EMBO J., 24, 2005
6LFX
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BU of 6lfx by Molmil
Crystal structure of PCB4scFv(hN56D) in complex with PCB#77
Descriptor: 1,2-bis(chloranyl)-4-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D)
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Crystal structure of PCB4scFv(hN56D) in complex with PCB#77
To Be Published
6LFW
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BU of 6lfw by Molmil
Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
Descriptor: 1,2,3-tris(chloranyl)-5-(3-chloranyl-4-methoxy-phenyl)benzene, PCB4scFv(hN56D), SODIUM ION
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of PCB4scFv(hN56D) in complex with PCB#126
To Be Published
6LCS
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BU of 6lcs by Molmil
Crystal structure of 73MuL9 Fv-clasp fragment in complex with GA-pyridine analogue
Descriptor: (2~{S})-6-[4-(hydroxymethyl)-3-oxidanyl-pyridin-1-ium-1-yl]-2-(phenylmethoxycarbonylamino)hexanoic acid, PHOSPHATE ION, VH-SARAH, ...
Authors:Nakamura, T, Takagi, J, Yamagata, Y, Morioka, H.
Deposit date:2019-11-19
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular recognition of a single-chain Fv antibody specific for GA-pyridine, an advanced glycation end-product (AGE), elucidated using biophysical techniques and synthetic antigen analogues.
J.Biochem., 170, 2021
6LFV
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BU of 6lfv by Molmil
Crystal structure of PCB4scFv(hN56D)
Descriptor: PCB4scFv(hN56D)
Authors:Nakamura, T, Yamagata, Y, Morioka, H.
Deposit date:2019-12-03
Release date:2020-12-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of PCB4scFv(hN56D)
To Be Published
8WWY
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BU of 8wwy by Molmil
Crystal structure of mouse TIFA/TIFAB heterodimer
Descriptor: (2R,5R)-hexane-2,5-diol, TRAF-interacting protein with FHA domain-containing protein A, TRAF-interacting protein with FHA domain-containing protein B
Authors:Nakamura, T.
Deposit date:2023-10-27
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:TIFAB regulates the TIFA-TRAF6 signaling pathway involved in innate immunity by forming a heterodimer complex with TIFA.
Proc.Natl.Acad.Sci.USA, 121, 2024
3NG5
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BU of 3ng5 by Molmil
Crystal Structure of V30M transthyretin complexed with (-)-epigallocatechin gallate (EGCG)
Descriptor: (2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, GLYCEROL, Transthyretin
Authors:Miyata, M, Nakamura, T, Ikemizu, S, Chirifu, M, Yamagata, Y, Kai, H.
Deposit date:2010-06-11
Release date:2010-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of green tea polyphenol(-)-epigallocatechin gallate (EGCG)-transthyretin complex reveals novel binding site distinct from thyroxine binding site
Biochemistry, 2010
3A4D
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BU of 3a4d by Molmil
Crystal structure of Human Transthyretin (wild-type)
Descriptor: GLYCEROL, SULFATE ION, Transthyretin
Authors:Miyata, M.
Deposit date:2009-07-06
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Role of the Glutamic Acid 54 Residue in Transthyretin Stability and Thyroxine Binding
Biochemistry, 2009
3A4F
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BU of 3a4f by Molmil
Crystal Structure of Human Transthyretin (E54K)
Descriptor: GLYCEROL, SULFATE ION, Transthyretin
Authors:Miyata, M, Sato, T, Nakamura, T, Ikemizu, S, Yamagata, Y, Kai, H.
Deposit date:2009-07-06
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Role of the glutamic acid 54 residue in transthyretin stability and thyroxine binding
Biochemistry, 49, 2010
3A4E
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BU of 3a4e by Molmil
Crystal structure of Human Transthyretin (E54G)
Descriptor: GLYCEROL, SULFATE ION, Transthyretin
Authors:Miyata, M, Sato, T, Nakamura, T, Ikemizu, S, Yamagata, Y, Kai, H.
Deposit date:2009-07-06
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of the glutamic acid 54 residue in transthyretin stability and thyroxine binding
Biochemistry, 49, 2010
1EHL
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BU of 1ehl by Molmil
64M-2 ANTIBODY FAB COMPLEXED WITH D(5HT)(6-4)T
Descriptor: 5'-(D(5HT)P*(6-4)T)-3', ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN), ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (LIGHT CHAIN)
Authors:Yokoyama, H, Mizutani, R, Satow, Y, Komatsu, Y, Ohtsuka, E, Nikaido, O.
Deposit date:2000-02-21
Release date:2001-02-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the 64M-2 antibody Fab fragment in complex with a DNA dT(6-4)T photoproduct formed by ultraviolet radiation.
J.Mol.Biol., 299, 2000
7X7X
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BU of 7x7x by Molmil
Human serum albumin complex with deschloro-aripiprazole
Descriptor: 7-[4-(4-phenylpiperazin-1-yl)butoxy]-3,4-dihydro-1H-quinolin-2-one, PHOSPHATE ION, Serum albumin
Authors:Kawai, A, Otagiri, M.
Deposit date:2022-03-10
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Chlorine Atoms of an Aripiprazole Molecule Control the Geometry and Motion of Aripiprazole and Deschloro-aripiprazole in Subdomain IIIA of Human Serum Albumin.
Acs Omega, 7, 2022
7EF8
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BU of 7ef8 by Molmil
Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG (Form I)
Descriptor: Adenine DNA glycosylase, DNA (5'-D(*TP*AP*GP*TP*CP*CP*CP*(3DR)P*GP*TP*CP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*CP*T)-3'), ...
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021
7EFA
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BU of 7efa by Molmil
Crystal structure of the complex between the C-terminal domain of mouse MUTYH and human PCNA
Descriptor: Adenine DNA glycosylase, Proliferating cell nuclear antigen
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021
7EF9
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BU of 7ef9 by Molmil
Crystal structure of mouse MUTYH in complex with DNA containing AP site analogue:8-oxoG (Form II)
Descriptor: Adenine DNA glycosylase, DNA (5'-D(*AP*TP*GP*AP*GP*AP*CP*(8OG)P*GP*GP*GP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*CP*CP*CP*(3DR)P*GP*TP*CP*TP*C)-3'), ...
Authors:Nakamura, T, Nakabeppu, Y, Yamagata, Y.
Deposit date:2021-03-21
Release date:2021-06-23
Last modified:2021-07-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structure of the mammalian adenine DNA glycosylase MUTYH: insights into the base excision repair pathway and cancer.
Nucleic Acids Res., 49, 2021

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