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1K0F
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BU of 1k0f by Molmil
Crystal structure of Zn(II)-free T. pallidum TroA
Descriptor: Periplasmic zinc-binding protein troA
Authors:Lee, Y.H, Dorwart, M.R, Hazlett, K.R, Deka, R.K, Norgard, M.V, Radolf, J.D, Hasemann, C.A.
Deposit date:2001-09-19
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of Zn(II)-free Treponema pallidum TroA, a periplasmic metal-binding protein, reveals a closed conformation.
J.Bacteriol., 184, 2002
1K6M
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BU of 1k6m by Molmil
Crystal Structure of Human Liver 6-Phosphofructo-2-Kinase/Fructose-2,6-Bisphosphatase
Descriptor: 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2-phosphatase, PHOSPHATE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Lee, Y.H, Li, Y, Uyeda, K, Hasemann, C.A.
Deposit date:2001-10-16
Release date:2002-12-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tissue-specific structure/function differentiation of the liver isoform of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase.
J.Biol.Chem., 278, 2003
1TOA
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BU of 1toa by Molmil
PERIPLASMIC ZINC BINDING PROTEIN TROA FROM TREPONEMA PALLIDUM
Descriptor: GLYCEROL, PROTEIN (PERIPLASMIC BINDING PROTEIN TROA), ZINC ION
Authors:Lee, Y.H, Deka, R.K, Norgard, M.V, Radolf, J.D, Hasemann, C.A.
Deposit date:1999-03-03
Release date:1999-07-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Treponema pallidum TroA is a periplasmic zinc-binding protein with a helical backbone.
Nat.Struct.Biol., 6, 1999
1C80
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BU of 1c80 by Molmil
REGULATORY COMPLEX OF FRUCTOSE-2,6-BISPHOSPHATASE
Descriptor: FRUCTOSE-2,6-BISPHOSPHATASE, GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION
Authors:Lee, Y.H, Olson, T.W, McClard, R.W, Witte, J.F, McFarlan, S.C, Banaszak, L.J, Levitt, D.G, Lange, A.J.
Deposit date:2000-04-03
Release date:2003-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reaction Mechanism of Fructose-2,6-bisphosphatase Suggested by the Crystal Structures of a pseudo-Michaelis complex and Metabolite Complexes
To be Published
1C7Z
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BU of 1c7z by Molmil
REGULATORY COMPLEX OF FRUCTOSE-2,6-BISPHOSPHATASE
Descriptor: FRUCTOSE-2,6-BISPHOSPHATASE, GLYCERALDEHYDE-3-PHOSPHATE, PHOSPHATE ION
Authors:Lee, Y.H, Olson, T.W, McClard, R.W, Witte, J.F, McFarlan, S.C, Banaszak, L.J, Levitt, D.G, Lange, A.J.
Deposit date:2000-04-03
Release date:2003-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Reaction Mechanism of Fructose-2,6-bisphosphatase Suggested by the Crystal Structures of a pseudo-Michaelis complex and Metabolite Complexes
To be Published
1C81
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BU of 1c81 by Molmil
MICHAELIS COMPLEX OF FRUCTOSE-2,6-BISPHOSPHATASE
Descriptor: 2,5-anhydro-1-deoxy-1-phosphono-6-O-phosphono-D-glucitol, FRUCTOSE-2,6-BISPHOSPHATASE
Authors:Lee, Y.H, Olson, T.W, McClard, R.W, Witte, J.F, McFarlan, S.C, Banaszak, L.J, Levitt, D.G, Lange, A.J.
Deposit date:2000-04-03
Release date:2003-06-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Reaction Mechanism of Fructose-2,6-bisphosphatase Suggested by the Crystal Structures of a pseudo-Michaelis complex and Metabolite Complexes
To be Published
2DWO
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BU of 2dwo by Molmil
PFKFB3 in complex with ADP and PEP
Descriptor: 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Lee, Y.H.
Deposit date:2006-08-16
Release date:2007-07-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase
J.Mol.Biol., 370, 2007
2DWP
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BU of 2dwp by Molmil
A pseudo substrate complex of 6-phosphofructo-2-kinase of PFKFB
Descriptor: 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, MAGNESIUM ION, ...
Authors:Lee, Y.H.
Deposit date:2006-08-16
Release date:2007-07-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase
J.Mol.Biol., 370, 2007
2F7N
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BU of 2f7n by Molmil
Structure of D. radiodurans Dps-1
Descriptor: COBALT (II) ION, DNA-binding stress response protein, Dps family, ...
Authors:Lee, Y.H, Kim, S.G, Bhattacharyya, G, Grove, A.
Deposit date:2005-12-01
Release date:2006-11-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Dps-1, a functionally distinct Dps protein from Deinococcus radiodurans.
J.Mol.Biol., 361, 2006
3AXG
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BU of 3axg by Molmil
Structure of 6-aminohexanoate-oligomer hydrolase
Descriptor: Endotype 6-aminohexanoat-oligomer hydrolase, SODIUM ION
Authors:Negoro, S, Shibata, N, Tanaka, Y, Yasuhira, K, Shibata, H, Hashimoto, H, Lee, Y.H, Ohshima, S, Santa, R, Mochiji, K, Goto, Y, Ikegami, T, Nagai, K, Kato, D, Takeo, M, Higuchi, Y.
Deposit date:2011-04-04
Release date:2011-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of nylon hydrolase and mechanism of nylon-6 hydrolysis
J.Biol.Chem., 287, 2012
1XVJ
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BU of 1xvj by Molmil
Crystal Structure Of Rat alpha-Parvalbumin D94S/G98E Mutant
Descriptor: CALCIUM ION, Parvalbumin alpha
Authors:Tanner, J.J, Agah, S, Lee, Y.H, Henzl, M.T.
Deposit date:2004-10-28
Release date:2005-09-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the D94S/G98E Variant of Rat alpha-Parvalbumin. An Explanation for the Reduced Divalent Ion Affinity.
Biochemistry, 44, 2005
2A3M
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BU of 2a3m by Molmil
Structure of Desulfovibrio desulfuricans G20 tetraheme cytochrome (oxidized form)
Descriptor: COG3005: Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit, HEME C
Authors:Pattarkine, M.V, Tanner, J.J, Bottoms, C.A, Lee, Y.H, Wall, J.D.
Deposit date:2005-06-25
Release date:2006-04-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Desulfovibrio desulfuricans G20 Tetraheme Cytochrome Structure at 1.5A and Cytochrome Interaction with Metal Complexes
J.Mol.Biol., 358, 2006
2AXN
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BU of 2axn by Molmil
Crystal structure of the human inducible form 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase
Descriptor: 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 (6PF-2-K/Fru- 2,6-P2ASE brain/placenta-type isozyme) (iPFK-2) [Includes: 6- phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)], ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kim, S.G, Manes, N.P, El-Maghrabi, M.R, Lee, Y.H.
Deposit date:2005-09-05
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the hypoxia-inducible form of 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB3): a possible new target for cancer therapy.
J.Biol.Chem., 281, 2006
5E8D
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BU of 5e8d by Molmil
Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5
Descriptor: CHLORIDE ION, GLYCEROL, Proepiregulin, ...
Authors:Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
Deposit date:2015-10-14
Release date:2015-12-09
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES
J.Biol.Chem., 291, 2016
5AZ2
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BU of 5az2 by Molmil
Crystal structure of the Fab fragment of 9E5, a murine monoclonal antibody specific for human epiregulin
Descriptor: anti-human epiregulin antibody 9E5 Fab heavy chain, anti-human epiregulin antibody 9E5 Fab light chain
Authors:Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
Deposit date:2015-09-16
Release date:2015-12-09
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES
J.Biol.Chem., 291, 2016
2I1V
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BU of 2i1v by Molmil
Crystal structure of PFKFB3 in complex with ADP and Fructose-2,6-bisphosphate
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, ...
Authors:Kim, S.G, El-Maghrabi, M.R, Lee, Y.H.
Deposit date:2006-08-15
Release date:2007-07-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Direct Substrate-Substrate Interaction Found in the Kinase Domain of the Bifunctional Enzyme, 6-Phosphofructo-2-kinase/Fructose-2,6-bisphosphatase
J.Mol.Biol., 370, 2007
3QPU
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BU of 3qpu by Molmil
PFKFB3 in complex with PPi
Descriptor: 1,2-ETHANEDIOL, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, PYROPHOSPHATE 2-, ...
Authors:Cavalier, M.C, Kim, S.G, Neau, D, Lee, Y.H.
Deposit date:2011-02-14
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of the fructose-2,6-bisphosphatase reaction of PFKFB3: Transition state and the C-terminal function.
Proteins, 80, 2012
3QPV
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BU of 3qpv by Molmil
PFKFB3 trapped in a phospho-enzyme intermediate state
Descriptor: 2,6-di-O-phosphono-beta-D-fructofuranose, 6-O-phosphono-beta-D-fructofuranose, 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3, ...
Authors:Cavalier, M.C, Kim, S.G, Neau, D, Lee, Y.H.
Deposit date:2011-02-14
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis of the fructose-2,6-bisphosphatase reaction of PFKFB3: Transition state and the C-terminal function.
Proteins, 80, 2012
3QPW
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BU of 3qpw by Molmil
PFKFB3 in complex with Aluminum Tetrafluoride
Descriptor: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
Authors:Cavalier, M.C, Kim, S.G, Neau, D, Lee, Y.H.
Deposit date:2011-02-14
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular basis of the fructose-2,6-bisphosphatase reaction of PFKFB3: Transition state and the C-terminal function.
Proteins, 80, 2012
1TIP
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BU of 1tip by Molmil
THE BISPHOSPHATASE DOMAIN OF THE BIFUNCTIONAL RAT LIVER 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
Descriptor: 6-O-phosphono-beta-D-fructofuranose, PHOSPHOENZYME INTERMEDIATE OF FRU-2,6-BISPHOSPHATASE
Authors:Lee, Y.-H, Olson, T.W, Ogata, C.M, Levitt, D.G, Banaszak, L.J, Lange, A.J.
Deposit date:1997-05-28
Release date:1998-01-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a trapped phosphoenzyme during a catalytic reaction.
Nat.Struct.Biol., 4, 1997
1FBT
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BU of 1fbt by Molmil
THE BISPHOSPHATASE DOMAIN OF THE BIFUNCTIONAL RAT LIVER 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
Descriptor: FRUCTOSE-2,6-BISPHOSPHATASE, PHOSPHATE ION
Authors:Lee, Y.-H, Ogata, C, Pflugrath, J.W, Levitt, D.G, Sarma, R, Banaszak, L.J, Pilkis, S.J.
Deposit date:1996-03-08
Release date:1997-07-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the rat liver fructose-2,6-bisphosphatase based on selenomethionine multiwavelength anomalous dispersion phases.
Biochemistry, 35, 1996
1S3P
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BU of 1s3p by Molmil
Crystal structure of rat alpha-parvalbumin S55D/E59D mutant
Descriptor: CALCIUM ION, Parvalbumin alpha, SULFATE ION
Authors:Tanner, J.J, Henzl, M.T.
Deposit date:2004-01-13
Release date:2004-09-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a High-Affinity Variant of Rat alpha-Parvalbumin.
Biochemistry, 43, 2004
4O8A
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BU of 4o8a by Molmil
First structure of a proline utilization A proline dehydrogenase domain
Descriptor: (2S)-2-HYDROXYPROPANOIC ACID, Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Tanner, J.J.
Deposit date:2013-12-26
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein.
Nat.Struct.Biol., 10, 2003
7VOC
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BU of 7voc by Molmil
The crystal structure of a Radical SAM Enzyme BlsE involved in the Biosynthesis of Blasticidin S
Descriptor: (2~{S},3~{S},4~{S},5~{R},6~{R})-6-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid, Cytosylglucuronate decarboxylase, GLYCEROL, ...
Authors:Hou, X.L, Zhou, J.H.
Deposit date:2021-10-13
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.62005424 Å)
Cite:Radical S -Adenosyl Methionine Enzyme BlsE Catalyzes a Radical-Mediated 1,2-Diol Dehydration during the Biosynthesis of Blasticidin S.
J.Am.Chem.Soc., 144, 2022
7VOB
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BU of 7vob by Molmil
The crystal structure of a Radical SAM Enzyme BlsE involved in the Biosynthesis of Blasticidin S
Descriptor: CHLORIDE ION, Cytosylglucuronate decarboxylase, GLYCEROL, ...
Authors:Hou, X.L, Zhou, J.H.
Deposit date:2021-10-13
Release date:2022-05-04
Method:X-RAY DIFFRACTION (2.092241 Å)
Cite:Radical S -Adenosyl Methionine Enzyme BlsE Catalyzes a Radical-Mediated 1,2-Diol Dehydration during the Biosynthesis of Blasticidin S.
J.Am.Chem.Soc., 144, 2022

 

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