2PCF
| THE COMPLEX OF CYTOCHROME F AND PLASTOCYANIN DETERMINED WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES | Descriptor: | COPPER (II) ION, CYTOCHROME F, HEME C, ... | Authors: | Ubbink, M, Ejdeback, M, Karlsson, B.G, Bendall, D.S. | Deposit date: | 1997-12-22 | Release date: | 1998-04-08 | Last modified: | 2022-03-16 | Method: | SOLUTION NMR | Cite: | The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics. Structure, 6, 1998
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2JTI
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8R88
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2KAJ
| NMR structure of gallium substituted ferredoxin | Descriptor: | Ferredoxin-1, GALLIUM (III) ION | Authors: | Xu, X, Ubbink, M, Knaff, D.B. | Deposit date: | 2008-11-06 | Release date: | 2009-11-10 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | Structural and functional characterization of the ga-substituted ferredoxin from Synechocystis sp. PCC6803, a mimic of the native protein. Biochemistry, 49, 2010
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5GXG
| High-resolution crystal structure of the electron transfer complex of cytochrome p450cam with putidaredoxin | Descriptor: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Camphor 5-monooxygenase, FE2/S2 (INORGANIC) CLUSTER, ... | Authors: | Kikui, Y, Hiruma, Y, Ubbink, M, Nojiri, M. | Deposit date: | 2016-09-17 | Release date: | 2017-01-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Identification of productive and futile encounters in an electron transfer protein complex Proc. Natl. Acad. Sci. U.S.A., 114, 2017
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8OE1
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8OE5
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1JVO
| Azurin dimer, crosslinked via disulfide bridge | Descriptor: | Azurin, COPPER (II) ION | Authors: | van Amsterdam, I.M.C, Ubbink, M, Einsle, O, Messerschmidt, A, Merli, A, Cavazzini, D, Rossi, G.L, Canters, G.W. | Deposit date: | 2001-08-30 | Release date: | 2002-01-04 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (2.75 Å) | Cite: | Dramatic modulation of electron transfer in protein complexes by crosslinking Nat.Struct.Biol., 9, 2002
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1Y7N
| Solution structure of the second PDZ domain of the human neuronal adaptor X11alpha | Descriptor: | Amyloid beta A4 precursor protein-binding family A member 1 | Authors: | Duquesne, A.E, de Ruijter, M, Brouwer, J, Drijfhout, J.W, Nabuurs, S.B, Spronk, C.A.E.M, Vuister, G.W, Ubbink, M, Canters, G.W. | Deposit date: | 2004-12-09 | Release date: | 2005-11-22 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the second PDZ domain of the neuronal adaptor X11alpha and its interaction with the C-terminal peptide of the human copper chaperone for superoxide dismutase J.Biomol.Nmr, 32, 2005
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1JVL
| Azurin dimer, covalently crosslinked through bis-maleimidomethylether | Descriptor: | 1-[PYRROL-1-YL-2,5-DIONE-METHOXYMETHYL]-PYRROLE-2,5-DIONE, Azurin, COPPER (II) ION, ... | Authors: | van Amsterdam, I.M.C, Ubbink, M, Einsle, O, Messerschmidt, A, Merli, A, Cavazzini, D, Rossi, G.L, Canters, G.W. | Deposit date: | 2001-08-30 | Release date: | 2002-01-04 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Dramatic modulation of electron transfer in protein complexes by crosslinking Nat.Struct.Biol., 9, 2002
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3W9C
| Crystal structure of the electron transfer complex of cytochrome p450cam with putidaredoxin | Descriptor: | Camphor 5-monooxygenase, FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, ... | Authors: | Kikui, Y, Hiruma, Y, Hass, M.A, Koteishi, H, Ubbink, M, Nojiri, M. | Deposit date: | 2013-04-03 | Release date: | 2013-08-21 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The structure of the cytochrome p450cam-putidaredoxin complex determined by paramagnetic NMR spectroscopy and crystallography. J.Mol.Biol., 425, 2013
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4NFG
| K13R mutant of horse cytochrome c and yeast cytochrome c peroxidase complex | Descriptor: | Cytochrome c, Cytochrome c peroxidase, mitochondrial, ... | Authors: | Meulenbroek, E.M, Bashir, Q, Ubbink, M, Pannu, N.S. | Deposit date: | 2013-10-31 | Release date: | 2014-09-24 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.11 Å) | Cite: | Engineering specificity in a dynamic protein complex with a single conserved mutation. Febs J., 281, 2014
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4GYD
| Nostoc sp Cytochrome c6 | Descriptor: | Cytochrome c6, HEME C | Authors: | Skubak, P, Ubbink, M, Cavazzini, D, Rossi, G.L, Pannu, N.S. | Deposit date: | 2012-09-05 | Release date: | 2013-09-11 | Last modified: | 2019-10-02 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy Biochim.Biophys.Acta, 1837, 2014
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3C75
| Paracoccus versutus methylamine dehydrogenase in complex with amicyanin | Descriptor: | Amicyanin, COPPER (II) ION, Methylamine dehydrogenase heavy chain, ... | Authors: | Cavalieri, C, Biermann, N, Vlasie, M.D, Einsle, O, Merli, A, Ferrari, D, Rossi, G.L, Ubbink, M. | Deposit date: | 2008-02-06 | Release date: | 2008-12-30 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural comparison of crystal and solution states of the 138 kDa complex of methylamine dehydrogenase and amicyanin from Paracoccus versutus. Biochemistry, 47, 2008
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1TU2
| THE COMPLEX OF NOSTOC CYTOCHROME F AND PLASTOCYANIN DETERMIN WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES | Descriptor: | Apocytochrome f, COPPER (II) ION, HEME C, ... | Authors: | Diaz-Moreno, I, Diaz-Quintana, A, De la Rosa, M.A, Ubbink, M. | Deposit date: | 2004-06-24 | Release date: | 2005-03-01 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Structure of the complex between plastocyanin and cytochrome f from the cyanobacterium Nostoc sp. PCC 7119 as determined by paramagnetic NMR. The balance between electrostatic and hydrophobic interactions within the transient complex determines the relative orientation of the two proteins. J.Biol.Chem., 280, 2005
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5NJ2
| Crystal structure of BlaC from Mycobacterium tuberculosis bound to phosphate | Descriptor: | 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, ACETATE ION, ... | Authors: | Tassoni, R, Pannu, N.S, Ubbink, M. | Deposit date: | 2017-03-27 | Release date: | 2017-11-15 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.19 Å) | Cite: | Phosphate Promotes the Recovery of Mycobacterium tuberculosis beta-Lactamase from Clavulanic Acid Inhibition. Biochemistry, 56, 2017
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1PY0
| Crystal structure of E51C/E54C Psaz from A.faecalis with CLaNP probe | Descriptor: | 7,10,13-TRI(CARBOXYMETHYL)-5,15-DIOXO-4,7,10,13,16-PENTAAZA-1,19-DITHIANONADECANE, Pseudoazurin, SULFATE ION, ... | Authors: | Prudencio, M, Rohovec, J, Peters, J.A, Tocheva, E, Boulanger, M.J, Murphy, M.E, Hupkes, H.J, Kosters, W, Impagliazzo, A, Ubbink, M. | Deposit date: | 2003-07-07 | Release date: | 2004-12-07 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | A caged lanthanide complex as a paramagnetic shift agent for protein NMR. Chemistry, 10, 2004
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8BTW
| Structure of D179N BlaC from Mycobacterium tuberculosis in complex with vaborbactam | Descriptor: | Beta-lactamase, GLYCEROL, PHOSPHATE ION, ... | Authors: | Chikunova, A, Bruenle, S, Ubbink, M. | Deposit date: | 2022-12-02 | Release date: | 2023-07-05 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Asp179 in the class A beta-lactamase from Mycobacterium tuberculosis is a conserved yet not essential residue due to epistasis. Febs J., 290, 2023
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8BTV
| Structure of D179N BlaC from Mycobacterium tuberculosis bound to the trans-enamine adduct of sulbactam | Descriptor: | Beta-lactamase, GLYCEROL, PHOSPHATE ION, ... | Authors: | Chikunova, A, Bruenle, S, Ubbink, M. | Deposit date: | 2022-12-02 | Release date: | 2023-07-05 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Asp179 in the class A beta-lactamase from Mycobacterium tuberculosis is a conserved yet not essential residue due to epistasis. Febs J., 290, 2023
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8BTU
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8BV4
| Structure of BlaC from Mycobacterium tuberculosis in complex with vaborbactam | Descriptor: | Beta-lactamase, GLYCEROL, PHOSPHATE ION, ... | Authors: | Chikunova, A, Bruenle, S, Ubbink, M. | Deposit date: | 2022-12-01 | Release date: | 2023-07-05 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Asp179 in the class A beta-lactamase from Mycobacterium tuberculosis is a conserved yet not essential residue due to epistasis. Febs J., 290, 2023
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1TKW
| The transient complex of poplar plastocyanin with turnip cytochrome f determined with paramagnetic NMR | Descriptor: | COPPER (II) ION, Cytochrome f, HEME C, ... | Authors: | Lange, C, Cornvik, T, Diaz-Moreno, I, Ubbink, M. | Deposit date: | 2004-06-09 | Release date: | 2005-05-24 | Last modified: | 2022-03-02 | Method: | SOLUTION NMR | Cite: | The transient complex of poplar plastocyanin with cytochrome f: effects of ionic strength and pH Biochim.Biophys.Acta, 1707, 2005
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2IDF
| P. aeruginosa azurin N42C/M64E double mutant, BMME-linked dimer | Descriptor: | 1-[PYRROL-1-YL-2,5-DIONE-METHOXYMETHYL]-PYRROLE-2,5-DIONE, Azurin, COPPER (II) ION, ... | Authors: | Einsle, O, de Jongh, T.E, Hoffmann, M, Cavazzini, D, Rossi, G.L, Ubbink, M, Canters, G.W. | Deposit date: | 2006-09-15 | Release date: | 2008-03-18 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Electron transfer in a crosslinked protein dimer mediated by a hydrogen-bonded network across the dimer interface To be Published
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4H0K
| Mutant m58h of Nostoc sp cytochrome c6 | Descriptor: | Cytochrome c6, HEME C | Authors: | Pannu, N.S, Skubak, P, Cavazzini, D, Rossi, G.L, Ubbink, M. | Deposit date: | 2012-09-08 | Release date: | 2013-09-11 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy Biochim.Biophys.Acta, 1837, 2014
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4H0J
| Mutant M58C of Nostoc sp Cytochrome c6 | Descriptor: | Cytochrome c6, HEME C | Authors: | Pannu, N.S, Skubak, P, Ubbink, M, Cavazzini, D, Rossi, G.L. | Deposit date: | 2012-09-08 | Release date: | 2013-09-11 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The dynamic complex of cytochrome c6 and cytochrome f studied with paramagnetic NMR spectroscopy Biochim.Biophys.Acta, 1837, 2014
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