Author results

3OWZ
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN IRIDIUM
Descriptor:Domain II of glycine riboswitch, GLYCINE, MAGNESIUM ION, ...
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-20
Release date:2010-12-29
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (2.949 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OX0
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, UNBOUND STATE
Descriptor:Domain II of glycine riboswitch, MAGNESIUM ION
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-20
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.049 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXB
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH WITH SINGLE MUTATION
Descriptor:Domain II of glycine riboswitch, MAGNESIUM ION
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.947 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXD
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH WITH TWO MUTATIONS
Descriptor:domain II of glycine riboswitch, MAGNESIUM ION
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.999 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXE
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, MN2+ SOAKED
Descriptor:domain II of glycine riboswitch, GLYCINE, MANGANESE (II) ION, ...
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXJ
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, SOAKED IN BA2+
Descriptor:domain II of glycine riboswitch, GLYCINE, BARIUM ION, ...
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXM
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CRYSTAL STRUCTURE OF GLYCINE RIBOSWITCH, TL-ACETATE SOAKED
Descriptor:domain II of glycine riboswitch, GLYCINE, THALLIUM (I) ION, ...
Authors:Huang, L., Serganov, A., Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3P04
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CRYSTAL STRUCTURE OF THE BCR PROTEIN FROM CORYNEBACTERIUM GLUTAMICUM. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET CGR8
Descriptor:Uncharacterized BCR
Authors:Vorobiev, S., Lew, S., Seetharaman, J., Hamilton, H., Xiao, R., Patel, D.J., Ciccosanti, C., Lee, D., Everett, J.K., Nair, R., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-09-27
Release date:2010-10-13
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the BCR protein from Corynebacterium glutamicum. Northeast Structural Genomics Consortium Target CgR8.
To be Published
3PT6
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CRYSTAL STRUCTURE OF MOUSE DNMT1(650-1602) IN COMPLEX WITH DNA
Descriptor:DNA (cytosine-5)-methyltransferase 1, DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), ...
Authors:Song, J., Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
3PT9
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CRYSTAL STRUCTURE OF MOUSE DNMT1(731-1602) IN THE FREE STATE
Descriptor:DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Song, J., Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
3PTA
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CRYSTAL STRUCTURE OF HUMAN DNMT1(646-1600) IN COMPLEX WITH DNA
Descriptor:DNA (cytosine-5)-methyltransferase 1, DNA (5'-D(*TP*CP*CP*CP*GP*TP*GP*AP*GP*CP*CP*TP*CP*CP*GP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*CP*GP*GP*AP*GP*GP*CP*TP*CP*AP*CP*GP*GP*GP*A)-3'), ...
Authors:Song, J., Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
3Q0B
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CRYSTAL STRUCTURE OF SUVH5 SRA- FULLY METHYLATED CG DNA COMPLEX IN SPACE GROUP P42212
Descriptor:Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5, DNA (5'-D(*AP*CP*TP*AP*(5CM)P*GP*TP*AP*GP*T)-3')
Authors:Eerappa, R., Simanshu, D.K., Patel, D.J.
Deposit date:2010-12-15
Release date:2011-02-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
3Q0C
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CRYSTAL STRUCTURE OF SUVH5 SRA-FULLY METHYLATED CG DNA COMPLEX IN SPACE GROUP P6122
Descriptor:Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5, DNA (5'-D(*AP*CP*TP*AP*(5CM)P*GP*TP*AP*GP*TP*T)-3'), ...
Authors:Eerappa, R., Simanshu, D.K., Patel, D.J.
Deposit date:2010-12-15
Release date:2011-02-02
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.6567 Å)
Cite:A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
3Q0D
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CRYSTAL STRUCTURE OF SUVH5 SRA- HEMI METHYLATED CG DNA COMPLEX
Descriptor:Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5, DNA (5'-D(*TP*CP*CP*AP*(5CM)P*GP*TP*CP*AP*G)-3'), ...
Authors:Eerappa, R., Simanshu, D.K., Patel, D.J.
Deposit date:2010-12-15
Release date:2011-02-23
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3704 Å)
Cite:A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
3Q0F
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CRYSTAL STRUCTURE OF SUVH5 SRA- METHYLATED CHH DNA COMPLEX
Descriptor:Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5, DNA (5'-D(*CP*TP*GP*AP*GP*GP*AP*GP*TP*AP*T)-3'), ...
Authors:Eerappa, R., Simanshu, D.K., Patel, D.J.
Deposit date:2010-12-15
Release date:2011-02-02
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
3QZS
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CRYSTAL STRUCTURE OF BPTF BROMO IN COMPLEX WITH HISTONE H4K16AC - FORM I
Descriptor:Nucleosome-remodeling factor subunit BPTF, Histone H4
Authors:Li, H., Ruthenburg, A.J., Patel, D.J.
Deposit date:2011-03-07
Release date:2011-06-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions.
Cell(Cambridge,Mass.), 145, 2011
3QZT
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CRYSTAL STRUCTURE OF BPTF BROMO IN COMPLEX WITH HISTONE H4K16AC - FORM II
Descriptor:Nucleosome-remodeling factor subunit BPTF, Histone H4, GLYCEROL
Authors:Li, H., Ruthenburg, A.J., Patel, D.J.
Deposit date:2011-03-07
Release date:2011-06-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions.
Cell(Cambridge,Mass.), 145, 2011
3QZV
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CRYSTAL STRUCTURE OF BPTF PHD-LINKER-BROMO IN COMPLEX WITH HISTONE H4K12AC PEPTIDE
Descriptor:Nucleosome-remodeling factor subunit BPTF, Histone H4, ZINC ION
Authors:Li, H., Ruthenburg, A.J., Patel, D.J.
Deposit date:2011-03-07
Release date:2011-06-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Recognition of a Mononucleosomal Histone Modification Pattern by BPTF via Multivalent Interactions.
Cell(Cambridge,Mass.), 145, 2011
3RAQ
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 1-METHYLGUANINE (MG1) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RAX
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER T BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DT))-3'), DNA (5'-D(*CP*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RB0
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DDG))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (3.225 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RB3
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER A BASE OPPOSITE THE 1-METHYLGUANINE (M1G) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(MG1)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RB4
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER G BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DDG))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RB6
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER A BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-28
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011
3RBD
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DPO4 EXTENSION TERNARY COMPLEX WITH 3'-TERMINAL PRIMER C BASE OPPOSITE THE 3-METHYLCYTOSINE (M3C) LESION
Descriptor:DNA polymerase IV, DNA (5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(DOC))-3'), DNA (5'-D(*C*CP*TP*AP*AP*CP*(ME6)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'), ...
Authors:Rechkoblit, O., Patel, D.J.
Deposit date:2011-03-29
Release date:2011-06-15
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Implications for damage recognition during Dpo4-mediated mutagenic bypass of m1G and m3C lesions.
Structure, 19, 2011