4V5G | | THE CRYSTAL STRUCTURE OF THE 70S RIBOSOME BOUND TO EF-TU AND TRNA | | Descriptor: | 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Schmeing, T.M., Voorhees, R.M., Ramakrishnan, V. | | Deposit date: | 2009-09-01 | | Release date: | 2014-07-09 | | Last modified: | 2018-04-18 | | Method: | X-RAY DIFFRACTION (3.6 Å) | | Cite: | The crystal structure of the ribosome bound to EF-Tu and aminoacyl-tRNA.
Science, 326, 2009
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4V5J | | STRUCTURE OF THE 70S RIBOSOME BOUND TO RELEASE FACTOR 2 AND A SUBSTRATE ANALOG PROVIDES INSIGHTS INTO CATALYSIS OF PEPTIDE RELEASE | | Descriptor: | 16S Ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Jin, H., Kelley, A.C., Loakes, D., Ramakrishnan, V. | | Deposit date: | 2010-03-24 | | Release date: | 2014-07-09 | | Last modified: | 2018-04-18 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.
Proc. Natl. Acad. Sci. U.S.A., 107, 2010
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4V5K | | STRUCTURE OF CYTOTOXIC DOMAIN OF COLICIN E3 BOUND TO THE 70S RIBOSOME | | Descriptor: | 16S ribosomal RNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Ng, C.L., Lang, K., Meenan, N.A.G., Sharma, A., Kelley, A.C., Kleanthous, C., Ramakrishnan, V. | | Deposit date: | 2010-05-29 | | Release date: | 2014-07-09 | | Last modified: | 2018-03-07 | | Method: | X-RAY DIFFRACTION (3.2 Å) | | Cite: | Structural Basis for 16S Ribosomal RNA Cleavage by the Cytotoxic Domain of Colicin E3.
Nat.Struct.Mol.Biol., 17, 2010
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4V5L | | THE STRUCTURE OF EF-TU AND AMINOACYL-TRNA BOUND TO THE 70S RIBOSOME WITH A GTP ANALOG | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Voorhees, R.M., Schmeing, T.M., Ramakrishnan, V. | | Deposit date: | 2010-09-02 | | Release date: | 2014-07-09 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | The Mechanism for Activation of GTP Hydrolysis on the Ribosome.
Science, 330, 2010
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4V5P | | THE CRYSTAL STRUCTURE OF EF-TU AND A9C-TRNA-TRP BOUND TO A NEAR- COGNATE CODON ON THE 70S RIBOSOME | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Schmeing, T.M., Voorhees, R.M., Ramakrishnan, V. | | Deposit date: | 2010-12-07 | | Release date: | 2014-07-09 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding.
Nat.Struct.Mol.Biol., 18, 2011
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4V5Q | | THE CRYSTAL STRUCTURE OF EF-TU AND G24A-TRNA-TRP BOUND TO A NEAR- COGNATE CODON ON THE 70S RIBOSOME | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Schmeing, T.M., Voorhees, R.M., Ramakrishnan, V. | | Deposit date: | 2010-12-07 | | Release date: | 2014-07-09 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding.
Nat.Struct.Mol.Biol., 18, 2011
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4V5R | | THE CRYSTAL STRUCTURE OF EF-TU AND TRP-TRNA-TRP BOUND TO A COGNATE CODON ON THE 70S RIBOSOME. | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Schmeing, T.M., Voorhees, R.M., Ramakrishnan, V. | | Deposit date: | 2010-12-07 | | Release date: | 2014-07-09 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding.
Nat.Struct.Mol.Biol., 18, 2011
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4V5S | | THE CRYSTAL STRUCTURE OF EF-TU AND G24A-TRNA-TRP BOUND TO A COGNATE CODON ON THE 70S RIBOSOME. | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Schmeing, T.M., Voorhees, R.M., Ramakrishnan, V. | | Deposit date: | 2010-12-07 | | Release date: | 2014-07-09 | | Last modified: | 2018-11-21 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | How Mutations in tRNA Distant from the Anticodon Affect the Fidelity of Decoding.
Nat.Struct.Mol.Biol., 18, 2011
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4V68 | | T. THERMOPHILUS 70S RIBOSOME IN COMPLEX WITH MRNA, TRNAS AND EF-TU.GDP.KIRROMYCIN TERNARY COMPLEX, FITTED TO A 6.4 A CRYO-EM MAP. | | Descriptor: | 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S4, ... | | Authors: | Schuette, J.-C., Spahn, C.M.T. | | Deposit date: | 2008-12-11 | | Release date: | 2014-07-09 | | Last modified: | 2015-03-25 | | Method: | ELECTRON MICROSCOPY (6.4 Å) | | Cite: | GTPase activation of elongation factor EF-Tu by the ribosome during decoding
Embo J., 28, 2009
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4V7J | | STRUCTURE OF RELE NUCLEASE BOUND TO THE 70S RIBOSOME (PRECLEAVAGE STATE) | | Descriptor: | 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ... | | Authors: | Neubauer, C., Gao, Y.-G., Andersen, K.R., Dunham, C.M., Kelley, A.C., Hentschel, J., Gerdes, K., Ramakrishnan, V., Brodersen, D.E. | | Deposit date: | 2009-11-02 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
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4V7K | | STRUCTURE OF RELE NUCLEASE BOUND TO THE 70S RIBOSOME (POSTCLEAVAGE STATE) | | Descriptor: | 30S ribosomal protein S2, 30S ribosomal protein S3, 30S ribosomal protein S4, ... | | Authors: | Neubauer, C., Gao, Y.-G., Andersen, K.R., Dunham, C.M., Kelley, A.C., Hentschel, J., Gerdes, K., Ramakrishnan, V., Brodersen, D.E. | | Deposit date: | 2009-11-02 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (3.6 Å) | | Cite: | The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
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4V8N | | THE CRYSTAL STRUCTURE OF AGMATIDINE TRNA-ILE2 BOUND TO THE 70S RIBOSOME IN THE A AND P SITE. | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Voorhees, R.M., Mandal, D., Neubauer, C., Koehrer, C., RajBhandary, U.L., Ramakrishnan, V. | | Deposit date: | 2013-02-13 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | The Structural Basis for Specific Decoding of Aua by Isoleucine tRNA on the Ribosome
Nat.Struct.Mol.Biol., 20, 2013
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4V8O | | CRYSTAL STRUCTURE OF THE HYBRID STATE OF RIBOSOME IN COMPLEX WITH THE GUANOSINE TRIPHOSPHATASE RELEASE FACTOR 3 | | Descriptor: | 16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ... | | Authors: | Jin, H., Kelley, A.C., Ramakrishnan, V. | | Deposit date: | 2011-07-26 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (3.8 Å) | | Cite: | Crystal Structure of the Hybrid State of Ribosome in Complex with the Guanosine Triphosphatase Release Factor 3.
Proc.Natl.Acad.Sci.USA, 108, 2011
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4V8Q | | COMPLEX OF SMPB, A TMRNA FRAGMENT AND EF-TU-GDP-KIRROMYCIN WITH THE 70S RIBOSOME | | Descriptor: | 50S RIBOSOMAL PROTEIN L27, 50S RIBOSOMAL PROTEIN L28, 50S RIBOSOMAL PROTEIN L29, ... | | Authors: | Neubauer, C., Gillet, R., Kelley, A.C., Ramakrishnan, V. | | Deposit date: | 2011-12-10 | | Release date: | 2014-07-09 | | Last modified: | 2018-03-07 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Decoding in the absence of a codon by tmRNA and SmpB in the ribosome.
Science, 335, 2012
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4V8Y | | CRYO-EM RECONSTRUCTION OF THE 80S-EIF5B-MET-ITRNAMET EUKARYOTIC TRANSLATION INITIATION COMPLEX | | Descriptor: | 40S RIBOSOMAL PROTEIN S26-A, 40S RIBOSOMAL PROTEIN S27-A, 40S RIBOSOMAL PROTEIN S28-A, ... | | Authors: | Fernandez, I.S., Bai, X.C., Hussain, T., Kelley, A.C., Lorsch, J.R., Ramakrishnan, V., Scheres, S.H.W. | | Deposit date: | 2013-07-20 | | Release date: | 2014-07-09 | | Last modified: | 2018-04-18 | | Method: | ELECTRON MICROSCOPY (4.3 Å) | | Cite: | Molecular architecture of a eukaryotic translational initiation complex.
Science, 342, 2013
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4V8Z | | CRYO-EM RECONSTRUCTION OF THE 80S-EIF5B-MET-ITRNAMET EUKARYOTIC TRANSLATION INITIATION COMPLEX | | Descriptor: | 40S RIBOSOMAL PROTEIN S26-A, 40S RIBOSOMAL PROTEIN S27-A, 40S RIBOSOMAL PROTEIN S28-A, ... | | Authors: | Fernandez, I.S., Bai, X.C., Hussain, T., Kelley, A.C., Lorsch, J.R., Ramakrishnan, V., Scheres, S.H.W. | | Deposit date: | 2013-07-20 | | Release date: | 2014-07-09 | | Last modified: | 2018-04-18 | | Method: | ELECTRON MICROSCOPY (6.6 Å) | | Cite: | Molecular architecture of a eukaryotic translational initiation complex.
Science, 342, 2013
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4V91 | | KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV-IRES | | Descriptor: | 25S RRNA, 5S RRNA, 5.8S RRNA, ... | | Authors: | Fernandez, I.S., Bai, X., Scheres, S.H.W., Ramakrishnan, V. | | Deposit date: | 2014-03-21 | | Release date: | 2014-07-09 | | Last modified: | 2017-08-02 | | Method: | ELECTRON MICROSCOPY (3.7 Å) | | Cite: | Initiation of Translation by Cricket Paralysis Virus Ires Requires its Translocation in the Ribosome.
Cell(Cambridge,Mass.), 157, 2014
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4V92 | | KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH CRPV-IRES | | Descriptor: | 18S RRNA, RNA OF CRICKET-PARALYSIS-VIRUS-IRES, US2, ... | | Authors: | Fernandez, I.S., Bai, X., Scheres, S.H.W., Ramakrishnan, V. | | Deposit date: | 2014-03-21 | | Release date: | 2014-07-09 | | Last modified: | 2017-08-02 | | Method: | ELECTRON MICROSCOPY (3.7 Å) | | Cite: | Initiation of Translation by Cricket Paralysis Virus Ires Requires its Translocation in the Ribosome.
Cell(Cambridge,Mass.), 157, 2014
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4V9H | | CRYSTAL STRUCTURE OF THE RIBOSOME BOUND TO ELONGATION FACTOR G IN THE GUANOSINE TRIPHOSPHATASE STATE | | Descriptor: | 16S ribosomal RNA, PE hybrid state tRNA Phe, mRNA, ... | | Authors: | Tourigny, D.S., Fernandez, I.S., Kelley, A.C., Ramakrishnan, V. | | Deposit date: | 2013-03-25 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (2.857 Å) | | Cite: | Elongation factor G bound to the ribosome in an intermediate state of translocation.
Science, 340, 2013
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4V9I | | CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS 70S IN COMPLEX WITH TRNAS AND MRNA CONTAINING A PSEUDOURIDINE IN A STOP CODON | | Descriptor: | 16S ribosomal RNA, 30S Ribosomal protein S2, 30S Ribosomal protein S3, ... | | Authors: | Fernandez, I.S., Ng, C.L., Kelley, A.C., Guowei, W., Yu, Y.T., Ramakrishnan, V. | | Deposit date: | 2013-04-04 | | Release date: | 2014-07-09 | | Last modified: | 2014-12-10 | | Method: | X-RAY DIFFRACTION (3.3 Å) | | Cite: | Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
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4WT8 | | CRYSTAL STRUCTURE OF BACTOBOLIN A BOUND TO 70S RIBOSOME-TRNA COMPLEX | | Descriptor: | mRNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ... | | Authors: | Amunts, A., Fiedorczuk, K., Ramakrishnan, V. | | Deposit date: | 2014-10-29 | | Release date: | 2015-01-21 | | Last modified: | 2018-07-18 | | Method: | X-RAY DIFFRACTION (3.4 Å) | | Cite: | Bactobolin A Binds to a Site on the 70S Ribosome Distinct from Previously Seen Antibiotics.
J.Mol.Biol., 427, 2015
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5IQR | | STRUCTURE OF RELA BOUND TO THE 70S RIBOSOME | | Descriptor: | 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, ... | | Authors: | Brown, A., Fernandez, I.S., Gordiyenko, Y., Ramakrishnan, V. | | Deposit date: | 2016-03-11 | | Release date: | 2016-05-04 | | Last modified: | 2018-10-17 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Ribosome-dependent activation of stringent control.
Nature, 534, 2016
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5IT7 | | STRUCTURE OF THE KLUYVEROMYCES LACTIS 80S RIBOSOME IN COMPLEX WITH THE CRICKET PARALYSIS VIRUS IRES AND EEF2 | | Descriptor: | 25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ... | | Authors: | Murray, J., Savva, C.G., Shin, B.S., Dever, T.E., Ramakrishnan, V., Fernandez, I.S. | | Deposit date: | 2016-03-16 | | Release date: | 2016-05-18 | | Last modified: | 2018-11-21 | | Method: | ELECTRON MICROSCOPY (3.6 Å) | | Cite: | Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
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5IT9 | | STRUCTURE OF THE YEAST KLUYVEROMYCES LACTIS SMALL RIBOSOMAL SUBUNIT IN COMPLEX WITH THE CRICKET PARALYSIS VIRUS IRES. | | Descriptor: | Ribosomal protein uS2, Ribosomal protein eS1, Ribosomal protein uS5, ... | | Authors: | Murray, J., Savva, C.G., Shin, B.S., Dever, T.E., Ramakrishnan, V., Fernandez, I.S. | | Deposit date: | 2016-03-16 | | Release date: | 2016-05-18 | | Last modified: | 2017-08-02 | | Method: | ELECTRON MICROSCOPY (3.8 Å) | | Cite: | Structural characterization of ribosome recruitment and translocation by type IV IRES.
Elife, 5, 2016
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5LMN | | STRUCTURE OF BACTERIAL 30S-IF1-IF3-MRNA TRANSLATION PRE-INITIATION COMPLEX (STATE-1A) | | Descriptor: | 16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ... | | Authors: | Hussain, T., Llacer, J.L., Wimberly, B.T., Ramakrishnan, V. | | Deposit date: | 2016-08-01 | | Release date: | 2016-10-05 | | Last modified: | 2018-11-21 | | Method: | ELECTRON MICROSCOPY (3.55 Å) | | Cite: | Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
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