Author results

1TGV
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED WITH 5-FLUOROURIDINE AND SULFATE
Descriptor:uridine phosphorylase, SULFATE ION, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Sanders, J.M., Begley, T.P., Ealick, S.E.
Deposit date:2004-05-31
Release date:2005-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of E. coli Uridine Phosphorylase
To be Published, 2004
1TGY
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED WITH URACIL AND RIBOSE 1-PHOSPHATE
Descriptor:uridine phosphorylase, RIBOSE-1-PHOSPHATE, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Sanders, J.M., Begley, T.P., Ealick, S.E.
Deposit date:2004-05-31
Release date:2005-06-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of E. coli Uridine Phosphorylase
To be Published, 2004
1U1C
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED TO 5-BENZYLACYCLOURIDINE (BAU)
Descriptor:Uridine phosphorylase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1D
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED TO 5-(PHENYLTHIO)ACYCLOURIDINE (PTAU)
Descriptor:Uridine phosphorylase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1E
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED TO 5(PHENYLSELENO)ACYCLOURIDINE (PSAU)
Descriptor:Uridine phosphorylase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1F
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED TO 5-(M-(BENZYLOXY)BENZYL)ACYCLOURIDINE (BBAU)
Descriptor:Uridine phosphorylase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Bu, W., Settembre, E.C., Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
1U1G
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STRUCTURE OF E. COLI URIDINE PHOSPHORYLASE COMPLEXED TO 5-(M-(BENZYLOXY)BENZYL)BARBITURIC ACID (BBBA)
Descriptor:Uridine phosphorylase, POTASSIUM ION, 1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)-6-HYDROXYPYRIMIDINE-2,4(1H,3H)-DIONE
Authors:Bu, W., Settembre, E.C., Ealick, S.E.
Deposit date:2004-07-15
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Acta Crystallogr.,Sect.D, 61, 2005
3BQJ
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VA387 POLYPEPTIDE
Descriptor:va387 polypeptide
Authors:Bu, W., Mamedova, A., Tan, M., Jiang, J., Hegde, R.
Deposit date:2007-12-20
Release date:2008-04-22
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
4DE6
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HORSE SPLEEN APO-FERRITIN COMPLEX WITH ARACHIDONIC ACID
Descriptor:Ferritin light chain, ARACHIDONIC ACID, CADMIUM ION, ...
Authors:Bu, W., Liu, R., Dmochowski, I.J., Loll, P.J., Eckenhoff, R.G.
Deposit date:2012-01-19
Release date:2012-03-07
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Ferritin couples iron and fatty acid metabolism.
Faseb J., 26, 2012
3BY1
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UNLIGANDED NORVALK VIRUS P DOMAIN
Descriptor:58 kd capsid protein
Authors:Hegde, R., Bu, W.
Deposit date:2008-01-15
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3BY2
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NORWALK P POLYPEPTIDE (228-523)
Descriptor:58 kd capsid protein
Authors:Hegde, R., Bu, W.
Deposit date:2008-01-15
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3D26
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NORWALK P DOMAIN A-TRISACCHARIDE COMPLEX
Descriptor:58 kd capsid protein, N-ACETYL-D-GALACTOSAMINE, BETA-D-GALACTOSE, ...
Authors:Hegde, R., Bu, W.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the receptor binding specificity of Norwalk virus.
J.Virol., 82, 2008
3ZJT
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TERNARY COMPLEX OF E.COLI LEUCYL-TRNA SYNTHETASE, TRNA(LEU)574 AND THE BENZOXABOROLE AN3017 IN THE EDITING CONFORMATION
Descriptor:LEUCYL-TRNA SYNTHETASE, TRNALEU5 UAA ISOACCEPTOR, MAGNESIUM ION
Authors:Cusack, S., Palencia, A., Crepin, T., Hernandez, V., Akama, T., Baker, S.J., Bu, W., Feng, L., Freund, Y.R., Liu, L., Meewan, M., Mohan, M., Mao, W., Rock, F.L., Sexton, H., Sheoran, A., Zhang, Y., Zhang, Y., Zhou, Y., Nieman, J.A., Anugula, M.R., Keramane, E.M., Savariraj, K., Reddy, D.S., Sharma, R., Subedi, R., Singh, R., OLeary, A., Simon, N.L., DeMarsh, P.L., Mushtaq, S., Warner, M., Livermore, D.M., Alley, M.R.K., Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
3ZJU
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TERNARY COMPLEX OF E .COLI LEUCYL-TRNA SYNTHETASE, TRNA(LEU) AND THE BENZOXABOROLE AN3016 IN THE EDITING CONFORMATION
Descriptor:LEUCYL-TRNA SYNTHETASE, TRNALEU5 UAA ISOACCEPTOR, MAGNESIUM ION
Authors:Cusack, S., Palencia, A., Crepin, T., Hernandez, V., Akama, T., Baker, S.J., Bu, W., Feng, L., Freund, Y.R., Liu, L., Meewan, M., Mohan, M., Mao, W., Rock, F.L., Sexton, H., Sheoran, A., Zhang, Y., Zhang, Y., Zhou, Y., Nieman, J.A., Anugula, M.R., Keramane, E.M., Savariraj, K., Reddy, D.S., Sharma, R., Subedi, R., Singh, R., OLeary, A., Simon, N.L., DeMarsh, P.L., Mushtaq, S., Warner, M., Livermore, D.M., Alley, M.R.K., Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
3ZJV
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TERNARY COMPLEX OF E .COLI LEUCYL-TRNA SYNTHETASE, TRNA(LEU) AND THE BENZOXABOROLE AN3213 IN THE EDITING CONFORMATION
Descriptor:LEUCINE--TRNA LIGASE, TRNALEU5 UAA ISOACCEPTOR
Authors:Cusack, S., Palencia, A., Crepin, T., Hernandez, V., Akama, T., Baker, S.J., Bu, W., Feng, L., Freund, Y.R., Liu, L., Meewan, M., Mohan, M., Mao, W., Rock, F.L., Sexton, H., Sheoran, A., Zhang, Y., Zhang, Y., Zhou, Y., Nieman, J.A., Anugula, M.R., Keramane, E.M., Savariraj, K., Reddy, D.S., Sharma, R., Subedi, R., Singh, R., OLeary, A., Simon, N.L., DeMarsh, P.L., Mushtaq, S., Warner, M., Livermore, D.M., Alley, M.R.K., Plattner, J.J.
Deposit date:2013-01-18
Release date:2013-04-17
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Discovery of a Novel Class of Boron-Based Antibacterials with Activity Against Gram-Negative Bacteria.
Antimicrob.Agents Chemother., 57, 2013
1LP3
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THE ATOMIC STRUCTURE OF ADENO-ASSOCIATED VIRUS (AAV-2), A VECTOR FOR HUMAN GENE THERAPY
Descriptor:AAV-2 capsid protein
Authors:Xie, Q., Bu, W., Bhatia, S., Hare, J., Somasundaram, T., Azzi, A., Chapman, M.S.
Deposit date:2002-05-07
Release date:2002-08-07
Last modified:2012-01-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.
Proc.Natl.Acad.Sci.USA, 99, 2002
1LU5
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2.4 ANGSTROM CRYSTAL STRUCTURE OF THE ASYMMETRIC PLATINUM COMPLEX {PT(AMMINE)(CYCLOHEXYLAMINE)}2+ BOUND TO A DODECAMER DNA DUPLEX
Descriptor:5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3', CIS-(AMMINE)(CYCLOHEXYLAMINE)PLATINUM(II) COMPLEX
Authors:Silverman, A.P., Bu, W., Cohen, S.M., Lippard, S.J.
Deposit date:2002-05-21
Release date:2002-12-20
Last modified:2012-02-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:2.4-A Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA Duplex
J.Biol.Chem., 277, 2002
3H0L
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STRUCTURE OF TRNA-DEPENDENT AMIDOTRANSFERASE GATCAB FROM AQUIFEX AEOLICUS
Descriptor:Glutamyl-tRNA(Gln) amidotransferase subunit A, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit C, ...
Authors:Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
Deposit date:2009-04-09
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3H0M
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STRUCTURE OF TRNA-DEPENDENT AMIDOTRANSFERASE GATCAB FROM AQUIFEX AEOLICUS
Descriptor:Glutamyl-tRNA(Gln) amidotransferase subunit A, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit C, ...
Authors:Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
Deposit date:2009-04-09
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3H0R
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STRUCTURE OF TRNA-DEPENDENT AMIDOTRANSFERASE GATCAB FROM AQUIFEX AEOLICUS
Descriptor:Glutamyl-tRNA(Gln) amidotransferase subunit A, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, Glutamyl-tRNA(Gln) amidotransferase subunit C, ...
Authors:Wu, J., Bu, W., Sheppard, K., Kitabatake, M., Soll, D., Smith, J.L.
Deposit date:2009-04-10
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into tRNA-Dependent Amidotransferase Evolution and Catalysis from the Structure of the Aquifex aeolicus Enzyme
J.Mol.Biol., 391, 2009
3KU4
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TRAPPING OF AN OXOCARBENIUM ION INTERMEDIATE IN UP CRYSTALS
Descriptor:Uridine phosphorylase, SULFATE ION
Authors:Paul, D., O'Leary, S., Rajashankar, K., Bu, W., Toms, A., Settembre, E., Sanders, J., Begley, T.P., Ealick, S.E.
Deposit date:2009-11-26
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KUK
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TRAPPING OF AN OXOCARBENIUM ION INTERMEDIATE IN UP CRYSTALS
Descriptor:Uridine phosphorylase, SULFATE ION, 2'-DEOXYURIDINE
Authors:Paul, D., O'Leary, S., Rajashankar, K., Bu, W., Toms, A., Settembre, E., Sanders, J., Begley, T.P., Ealick, S.E.
Deposit date:2009-11-27
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.783 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVR
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TRAPPING OF AN OXOCARBENIUM ION INTERMEDIATE IN UP CRYSTALS
Descriptor:Uridine phosphorylase, 5-FLUOROURACIL, SULFATE ION, ...
Authors:Paul, D., O'Leary, S., Rajashankar, K., Bu, W., Toms, A., Settembre, E., Sanders, J., Begley, T.P., Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVV
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TRAPPING OF AN OXOCARBENIUM ION INTERMEDIATE IN UP CRYSTALS
Descriptor:Uridine phosphorylase, 5-FLUOROURACIL, SULFATE ION, ...
Authors:Paul, D., O'Leary, S., Rajashankar, K., Bu, W., Toms, A., Settembre, E., Sanders, J., Begley, T.P., Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
3KVY
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TRAPPING OF AN OXOCARBENIUM ION INTERMEDIATE IN UP CRYSTALS
Descriptor:Uridine Phosphorylase, SULFATE ION, URACIL, ...
Authors:Paul, D., O'Leary, S., Rajashankar, K., Bu, W., Toms, A., Settembre, E., Sanders, J., Begley, T.P., Ealick, S.E.
Deposit date:2009-11-30
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycal formation in crystals of uridine phosphorylase.
Biochemistry, 49, 2010
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