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4JMH
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BU of 4jmh by Molmil
Crystal structure of synthetic protein in complex with double pY peptide
Descriptor: Clamp Shc1_pY239/240, SHC-transforming protein 1
Authors:Yasui, N, Smith, L, Koide, S.
Deposit date:2013-03-14
Release date:2014-04-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.408 Å)
Cite:Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation.
Mol.Cell, 54, 2014
5ECJ
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BU of 5ecj by Molmil
Crystal structure of monobody Mb(S4) bound to Prdm14 in complex with Mtgr1
Descriptor: Monobody Mb(S4), PR domain zinc finger protein 14,Protein CBFA2T2
Authors:Gupta, A, Koide, S.
Deposit date:2015-10-20
Release date:2015-12-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:ETO family protein Mtgr1 mediates Prdm14 functions in stem cell maintenance and primordial germ cell formation.
Elife, 4, 2015
2OCF
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BU of 2ocf by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with estradiol and the E2#23 FN3 monobody
Descriptor: ESTRADIOL, Estrogen receptor, Fibronectin
Authors:Rajan, S.S, Kuruvilla, S.M, Sharma, S.K, Kim, Y, Huang, J, Koide, A, Koide, S, Joachimiak, A, Greene, G.L.
Deposit date:2006-12-20
Release date:2007-11-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Probing protein conformational changes in living cells by using designer binding proteins: application to the estrogen receptor.
Proc.Natl.Acad.Sci.USA, 99, 2002
3EFD
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BU of 3efd by Molmil
The crystal structure of the cytoplasmic domain of KcsA
Descriptor: FabH, FabL, KcsA
Authors:Uysal, S, Vasquez, V, Tereshko, V, Esaki, K, Fellouse, F.A, Sidhu, S.S, Koide, S, Perozo, E, Kossiakoff, A.
Deposit date:2008-09-08
Release date:2009-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of full-length KcsA in its closed conformation.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EFF
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BU of 3eff by Molmil
The Crystal Structure of Full-Length KcsA in its Closed Conformation
Descriptor: FAB, Voltage-gated potassium channel
Authors:Uysal, S, Vasquez, V, Tereshko, T, Esaki, K, Fellouse, F.A, Sidhu, S.S, Koide, S, Perozo, E, Kossiakoff, A.
Deposit date:2008-09-08
Release date:2009-04-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of full-length KcsA in its closed conformation.
Proc.Natl.Acad.Sci.USA, 106, 2009
3IVK
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BU of 3ivk by Molmil
Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody Fragment
Descriptor: CADMIUM ION, CHLORIDE ION, Fab heavy chain, ...
Authors:Koldobskaya, Y, Duguid, E.M, Shechner, D.M, Koide, S, Kossiakoff, A.A, Bartel, D.P, Piccirilli, J.A.
Deposit date:2009-09-01
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the catalytic core of an RNA-polymerase ribozyme.
Science, 326, 2009
2IQY
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BU of 2iqy by Molmil
Rat Phosphatidylethanolamine-Binding Protein
Descriptor: CALCIUM ION, CHLORIDE ION, Phosphatidylethanolamine-binding protein 1
Authors:Kim, Y, Joachimiak, G, Heil, G.L, Koide, S, Joachimiak, A.
Deposit date:2006-10-14
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Rat Phosphatidylethanolamine-Binding Protein
To be Published
2OY8
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BU of 2oy8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OY7
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BU of 2oy7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, A, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
2OBG
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BU of 2obg by Molmil
Crystal Structure of Monobody MBP-74/Maltose Binding Protein Fusion Complex
Descriptor: Maltose Binding periplasmic Protein and Monobody MBP-74 Fusion protein
Authors:Gilbreth, R.N, Tereshko, V, Koide, S.
Deposit date:2006-12-19
Release date:2007-03-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:High-affinity single-domain binding proteins with a binary-code interface.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2OYB
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BU of 2oyb by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Biancalana, M, Terechko, V, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics
J.Mol.Biol., 383, 2008
3EEX
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BU of 3eex by Molmil
The crystal structure of OspA mutant
Descriptor: HEXAETHYLENE GLYCOL, Outer Surface Protein A
Authors:Makabe, K, Biancalana, M, Koide, S.
Deposit date:2008-09-06
Release date:2009-09-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
3CKF
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BU of 3ckf by Molmil
The crystal structure of OspA deletion mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Koide, S.
Deposit date:2008-03-14
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
3CKG
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BU of 3ckg by Molmil
The crystal structure of OspA deletion mutant
Descriptor: MAGNESIUM ION, Outer surface protein A
Authors:Makabe, K, Koide, S.
Deposit date:2008-03-14
Release date:2009-01-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion
J.Am.Chem.Soc., 130, 2008
3CKA
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BU of 3cka by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A, PENTAETHYLENE GLYCOL
Authors:Makabe, K, Biancalana, M, Terechko, V, Koide, S.
Deposit date:2008-03-14
Release date:2009-03-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Minimalist design of water-soluble cross-{beta} architecture.
Proc.Natl.Acad.Sci.USA, 107, 2010
4M1C
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BU of 4m1c by Molmil
Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
Descriptor: Amyloid beta A4 protein, Fab-bound IDE, heavy chain, ...
Authors:McCord, L.M, Liang, W, Farcasanu, M, Scherpelz, K, Meredith, S.C, Koide, S, Tang, W.J.
Deposit date:2013-08-02
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.5007 Å)
Cite:Crystal Structure Analysis of Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Amyloid-Beta (1-40)
To be Published
2OY5
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BU of 2oy5 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Biancalana, M, Yan, S, Koide, S.
Deposit date:2007-02-21
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
2OL8
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BU of 2ol8 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OY1
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BU of 2oy1 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-02-21
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL7
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BU of 2ol7 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2OL6
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BU of 2ol6 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-01-18
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:beta-Strand Flipping and Slipping Triggered by Turn Replacement Reveal the Opportunistic Nature of beta-Strand Pairing
J.Am.Chem.Soc., 129, 2007
2PI3
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BU of 2pi3 by Molmil
The crystal structure of OspA mutant
Descriptor: Outer surface protein A
Authors:Biancalana, M, Makabe, K, Terechko, V, Koide, S.
Deposit date:2007-04-12
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Aromatic cluster mutations produce focal modulations of beta-sheet structure.
Protein Sci., 24, 2015
1F1M
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BU of 1f1m by Molmil
CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN C (OSPC)
Descriptor: OUTER SURFACE PROTEIN C, ZINC ION
Authors:Kumaran, D, Eswaramoorthy, S, Dunn, J.J, Swaminathan, S.
Deposit date:2000-05-19
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi.
EMBO J., 20, 2001
2QR0
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BU of 2qr0 by Molmil
Structure of VEGF complexed to a Fab containing TYR and SER in the CDRs
Descriptor: Fab-Fragment Heavy Chain, Fab-Fragment Light Chain, Vascular endothelial growth factor A
Authors:Wiesmann, C.
Deposit date:2007-07-27
Release date:2007-08-14
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:High-throughput generation of synthetic antibodies from highly functional minimalist phage-displayed libraries
J.Mol.Biol., 373, 2007
6TLC
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BU of 6tlc by Molmil
Unphosphorylated human STAT3 in complex with MS3-6 monobody
Descriptor: Monobody, Signal transducer and activator of transcription 3
Authors:La Sala, G, Lau, K, Reynaud, A, Pojer, F, Hantschel, O.
Deposit date:2019-12-02
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Selective inhibition of STAT3 signaling using monobodies targeting the coiled-coil and N-terminal domains.
Nat Commun, 11, 2020

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