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PDB: 145 results

8GF4
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Crystal structure of Domain Related to Iron (DRI) in complex with heme
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Ssr1698 protein, ZINC ION
Authors:Kumaran, D, Blaby, E.C.
Deposit date:2023-03-07
Release date:2024-03-13
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
8GDW
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BU of 8gdw by Molmil
Crystal structure of Domain Related to Iron (DRI) from cyanobacteria
Descriptor: Ssr1698 protein, ZINC ION
Authors:Kumaran, D, Grosjean, N, Blaby, E.C.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A hemoprotein with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria.
Nat Commun, 15, 2024
4ZJX
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BU of 4zjx by Molmil
Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with a Novel Cyclic Peptide Inhibitor
Descriptor: Botulinum neurotoxin type A, SULFATE ION, ZINC ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2015-04-29
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal structure of the catalytic domain of botulinum neurotoxin serotype A with a Novel Cyclic Peptide Inhibitor
To Be Published
4DUP
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BU of 4dup by Molmil
Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
Descriptor: quinone oxidoreductase
Authors:Kumaran, D, Rice, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-02-22
Release date:2012-03-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structure of a quinone oxidoreductase from Rhizobium etli CFN 42
To be Published
4E3Z
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BU of 4e3z by Molmil
Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
Descriptor: Putative oxidoreductase protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-11
Release date:2012-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of a oxidoreductase from Rhizobium etli CFN 42
To be Published
7K40
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BU of 7k40 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (3CLpro/Mpro) in Complex with Covalent Inhibitor Boceprevir at 1.35 A Resolution
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, boceprevir (bound form)
Authors:Kumaran, D, Andi, B, Kreitler, D.F, Soares, A.S, Shi, W, Jakoncic, J, Fuchs, M.R, Keereetaweep, J, Shanklin, J, McSweeney, S.
Deposit date:2020-09-14
Release date:2020-09-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Hepatitis C virus NS3/4A inhibitors and other drug-like compounds as covalent binders of SARS-CoV-2 main protease.
Sci Rep, 12, 2022
1F1M
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BU of 1f1m by Molmil
CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN C (OSPC)
Descriptor: OUTER SURFACE PROTEIN C, ZINC ION
Authors:Kumaran, D, Eswaramoorthy, S, Dunn, J.J, Swaminathan, S.
Deposit date:2000-05-19
Release date:2001-04-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of outer surface protein C (OspC) from the Lyme disease spirochete, Borrelia burgdorferi.
EMBO J., 20, 2001
1I4P
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BU of 1i4p by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.5
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4R
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BU of 1i4r by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.5
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1I4Q
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BU of 1i4q by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 6.0
Descriptor: ENTEROTOXIN TYPE C-2, ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2001-02-22
Release date:2001-03-14
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
1CQV
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BU of 1cqv by Molmil
CRYSTAL STRUCTURE OF STAPHYLOCOCCAL ENTEROTOXIN C2 AT 100K CRYSTALLIZED AT PH 5.0
Descriptor: PROTEIN (STAPHYLOCOCCAL ENTEROTOXIN C2), ZINC ION
Authors:Kumaran, D, Swaminathan, S.
Deposit date:1999-08-11
Release date:1999-08-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of staphylococcal enterotoxin C2 at various pH levels.
Acta Crystallogr.,Sect.D, 57, 2001
3OC4
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BU of 3oc4 by Molmil
Crystal Structure of a pyridine nucleotide-disulfide family oxidoreductase from the Enterococcus faecalis V583
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase, pyridine nucleotide-disulfide family, ...
Authors:Kumaran, D, Baumann, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-08-09
Release date:2010-10-06
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of a pyridine nucleotide-disulfide family oxidoreductase from the Enterococcus faecalis V583
To be Published
3QW7
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BU of 3qw7 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RRFC
Descriptor: Botulinum neurotoxin type A, SODIUM ION, SULFATE ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW6
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BU of 3qw6 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RYGC
Descriptor: Botulinum neurotoxin type A, SODIUM ION, SULFATE ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-26
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW8
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BU of 3qw8 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor CRGC
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type A, SODIUM ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-27
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
3QW5
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BU of 3qw5 by Molmil
Crystal structure of the protease domain of Botulinum Neurotoxin Serotype A with a peptide inhibitor RRGF
Descriptor: Botulinum neurotoxin type A, SULFATE ION, ZINC ION, ...
Authors:Kumaran, D, Swaminathan, S.
Deposit date:2011-02-26
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptide inhibitors of botulinum neurotoxin serotype A: design, inhibition, cocrystal structures, structure-activity relationship and pharmacophore modeling.
Acta Crystallogr.,Sect.D, 68, 2012
2AFA
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BU of 2afa by Molmil
Crystal Structure of putative NAG isomerase from Salmonella typhimurium
Descriptor: NAG isomerase
Authors:Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-07-25
Release date:2005-08-16
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of putative NAG isomerase from Salmonella typhimurium
To be Published
1YT8
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BU of 1yt8 by Molmil
Crystal Structure of Thiosulfate sulfurtransferase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, SULFITE ION, thiosulfate sulfurtransferase
Authors:Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-02-10
Release date:2005-03-22
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Thiosulfate sulfurtransferase from Pseudomonas aeruginosa
To be Published
1F89
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BU of 1f89 by Molmil
Crystal structure of Saccharomyces cerevisiae Nit3, a member of branch 10 of the nitrilase superfamily
Descriptor: 32.5 KDA PROTEIN YLR351C
Authors:Kumaran, D, Eswaramoorthy, S, Studier, F.W, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2000-06-29
Release date:2001-10-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a putative CN hydrolase from yeast
Proteins, 52, 2003
3SQS
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BU of 3sqs by Molmil
Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Kumaran, D, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-06
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
To be Published
3T61
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BU of 3t61 by Molmil
Crystal Structure of a gluconokinase from Sinorhizobium meliloti 1021
Descriptor: Gluconokinase, PHOSPHATE ION
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-28
Release date:2011-08-17
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a gluconokinase from Sinorhizobium meliloti 1021
To be Published
3URH
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BU of 3urh by Molmil
Crystal structure of a dihydrolipoamide dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: 1,2-ETHANEDIOL, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-11-22
Release date:2011-12-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a dihydrolipoamide dehydrogenase from Sinorhizobium meliloti 1021
TO BE PUBLISHED
3V8B
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BU of 3v8b by Molmil
Crystal Structure of a 3-ketoacyl-ACP reductase from Sinorhizobium meliloti 1021
Descriptor: Putative dehydrogenase, possibly 3-oxoacyl-[acyl-carrier protein] reductase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-12-22
Release date:2012-01-11
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a 3-ketoacyl-ACP reductase from Sinorhizobium meliloti 1021
To be Published
3US8
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BU of 3us8 by Molmil
Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: Isocitrate dehydrogenase [NADP], SULFATE ION
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-11-23
Release date:2011-12-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
To be Published
4HY3
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BU of 4hy3 by Molmil
Crystal structure of a phosphoglycerate oxidoreductase from rhizobium etli
Descriptor: phosphoglycerate oxidoreductase
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-11-12
Release date:2012-12-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a phosphoglycerate oxidoreductase from rhizobium etli
To be Published

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PDB entries from 2024-04-24

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