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... above a certain threshold (Sequence identity30% and E-value0.1) arelinked. The set is first clustered using single-linkage ... these clusters are partitioned by the following iterative procedure: 1. The structure with the greatest number of links is chosen ...

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... stabilise the C-terminal region of human glutathione transferase A1-1: a crystallographic and calorimetric study (2005) J.Mol.Biol ... large, diverse and demanding global community of users. (1) Announcing the worldwide Protein Data Bank. Berman H, Henrick ...

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... pertaining to these data. These extensions cover three main areas: 1. scaled and merged reflection data that have been processed to ... , by providing descriptors for that anisotropy, in terms of (1) a parameter-free definition of a cut-off surface by ...

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What is SIFTS? SIFTS*1 (Structure integration with function, taxonomy and sequence) is an up-to-date ... [] -- The same as above but in an array of text (for convenience). ); *1) Velankar et al., Nucleic Acids Research 41, D483 (2013)

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... , respectively, and over two million atoms each. The HIV-1 capsid is the protein envelope that encloses and protects the RNA ... /EMD-5639/map/emd_5639.map.gz Reference Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular ...

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... The information comes from several databases and literature sources. 1) Functional Information from GO Data The GO (GeneOntology) ... the catalytic residues from homologous enzymes is as follows: 1. Extract the PDB sequence from the original CATRES file ...

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... April 2019 (JST). Thank you for using this service so long. References 1. Similarity search for local protein structures at atomic resolution by exploiting a ...