PDB: 458 件ウェブページステータス検索Chemie searchBIRD

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1ZM4	Structure of the eEF2-ETA-bTAD complex 分子名称: BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, Elongation factor 2, exotoxin A 著者 Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R. 登録日 2005-05-10 公開日 2005-05-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry. Nature, 436, 2005
1ZM2	Structure of ADP-ribosylated eEF2 in complex with catalytic fragment of ETA 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Exotoxin A 著者 Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R. 登録日 2005-05-10 公開日 2005-05-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.07 Å) 主引用文献 Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry. Nature, 436, 2005
1ZO1	IF2, IF1, and tRNA fitted to cryo-EM data OF E. COLI 70S initiation complex 分子名称: P/I-site tRNA, translation Initiation Factor 1, translation initiation factor 2 著者 Allen, G.S, Zavialov, A, Gursky, R, Ehrenberg, M, Frank, J. 登録日 2005-05-12 公開日 2005-06-14 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (13.8 Å) 主引用文献 The Cryo-EM Structure of a Translation Initiation Complex from Escherichia coli. Cell(Cambridge,Mass.), 121, 2005
2BV3	Crystal structure of a mutant elongation factor G trapped with a GTP analogue 分子名称: ELONGATION FACTOR G, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 著者 Hansson, S, Singh, R, Gudkov, A.T, Liljas, A, Logan, D.T. 登録日 2005-06-22 公開日 2005-08-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of a Mutant Elongation Factor G Trapped with a GTP Analogue. FEBS Lett., 579, 2005
2BVN	E. coli EF-Tu:GDPNP in complex with the antibiotic enacyloxin IIa 分子名称: ELONGATION FACTOR TU, ENACYLOXIN IIA, MAGNESIUM ION, ... 著者 Parmeggiani, A, Krab, I.M, Watanabe, T, Nielsen, R.C, Dahlberg, C, Nyborg, J, Nissen, P. 登録日 2005-06-30 公開日 2005-09-01 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Enacyloxin Iia Pinpoints a Binding Pocket of Elongation Factor TU for Development of Novel Antibiotics. J.Biol.Chem., 281, 2006
1OB5	T. aquaticus elongation factor EF-Tu complexed with the antibiotic enacyloxin IIa, a GTP analog, and Phe-tRNA 分子名称: ELONGATION FACTOR TU, ENACYLOXIN IIA, MAGNESIUM ION, ... 著者 Dahlberg, C, Nielsen, R.C, Parmeggiani, A, Nyborg, J, Nissen, P. 登録日 2003-01-24 公開日 2005-10-13 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Enacyloxin Iia Pinpoints a Binding Pocket of Elongation Factor TU for Development of Novel Antibiotics. J.Biol.Chem., 281, 2006
1ZUN	Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Mougous, J.D, Lee, D.H, Hubbard, S.C, Schelle, M.W, Vocadlo, D.J, Berger, J.M, Bertozzi, C.R. 登録日 2005-05-31 公開日 2006-01-17 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular basis for g protein control of the prokaryotic ATP sulfurylase. Mol.Cell, 21, 2006
2C78	EF-Tu complexed with a GTP analog and the antibiotic pulvomycin 分子名称: (1S,2S,3E,5E,7E,10S,11S,12S)-12-[(2R,4E,6E,8Z,10R,12E,14E,16Z,18S,19Z)-10,18-DIHYDROXY-12,16,19-TRIMETHYL-11,22-DIOXOOX ACYCLODOCOSA-4,6,8,12,14,16,19-HEPTAEN-2-YL]-2,11-DIHYDROXY-1,10-DIMETHYL-9-OXOTRIDECA-3,5,7-TRIEN-1-YL 6-DEOXY-2,4-DI-O-METHYL-BETA-L-GALACTOPYRANOSIDE, ELONGATION FACTOR TU-A, MAGNESIUM ION, ... 著者 Parmeggiani, A, Krab, I.M, Okamura, S, Nielsen, R.C, Nyborg, J, Nissen, P. 登録日 2005-11-18 公開日 2006-03-16 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry, 45, 2006
2C77	EF-Tu complexed with a GTP analog and the antibiotic GE2270 A 分子名称: DI(HYDROXYETHYL)ETHER, ELONGATION FACTOR TU-B, MAGNESIUM ION, ... 著者 Parmeggiani, A, Krab, I.M, Okamura, S, Nielsen, R.C, Nyborg, J, Nissen, P. 登録日 2005-11-18 公開日 2006-03-16 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis of the action of pulvomycin and GE2270 A on elongation factor Tu. Biochemistry, 45, 2006
2FX3	Crystal Structure Determination of E. coli Elongation Factor, Tu using a Twinned Data Set 分子名称: Elongation factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Heffron, S.E, Moeller, R, Jurnak, F. 登録日 2006-02-03 公開日 2006-03-28 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Solving the structure of Escherichia coli elongation factor Tu using a twinned data set. Acta Crystallogr.,Sect.D, 62, 2006
2B7B	Yeast guanine nucleotide exchange factor eEF1Balpha K205A mutant in complex with eEF1A and GDP 分子名称: Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE, elongation factor-1 beta 著者 Pittman, Y.R, Valente, L, Jeppesen, M.G, Andersen, G.R, Patel, S, Kinzy, T.G. 登録日 2005-10-04 公開日 2006-05-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Mg2+ and a key lysine modulate exchange activity of eukaryotic translation elongation factor 1B alpha J.Biol.Chem., 281, 2006
2B7C	Yeast guanine nucleotide exchange factor eEF1Balpha K205A mutant in complex with eEF1A 分子名称: Elongation factor 1-alpha, elongation factor-1 beta 著者 Pittman, Y.R, Valente, L, Jeppesen, M.G, Andersen, G.R, Patel, S, Kinzy, T.G. 登録日 2005-10-04 公開日 2006-05-02 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Mg2+ and a key lysine modulate exchange activity of eukaryotic translation elongation factor 1B alpha J.Biol.Chem., 281, 2006
2D74	Crystal structure of translation initiation factor aIF2betagamma heterodimer 分子名称: Translation initiation factor 2 beta subunit, Translation initiation factor 2 gamma subunit, ZINC ION 著者 Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I. 登録日 2005-11-16 公開日 2006-07-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region. Proc.Natl.Acad.Sci.USA, 103, 2006
2DCU	Crystal structure of translation initiation factor aIF2betagamma heterodimer with GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 beta subunit, ... 著者 Sokabe, M, Yao, M, Sakai, N, Toya, S, Tanaka, I. 登録日 2006-01-16 公開日 2006-07-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region. Proc.Natl.Acad.Sci.USA, 103, 2006
2HDN	Trypsin-modified Elongation Factor Tu in complex with tetracycline at 2.8 Angstrom resolution 分子名称: Elongation factor EF-Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Mui, S, Heffron, S.E, Aorora, A, Abel, K, Bergmann, E, Jurnak, F. 登録日 2006-06-20 公開日 2006-10-31 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular complementarity between tetracycline and the GTPase active site of elongation factor Tu. Acta Crystallogr.,Sect.D, 62, 2006
2HCJ	Trypsin-modified Elongation Factor Tu in complex with tetracycline 分子名称: GLYOXYLIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Mui, S, Heffron, S.E, Aorora, A, Abel, K, Bergmann, E, Jurnak, F. 登録日 2006-06-16 公開日 2006-10-31 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Molecular complementarity between tetracycline and the GTPase active site of elongation factor Tu. Acta Crystallogr.,Sect.D, 62, 2006
2E1R	Structure of eEF2 in complex with a sordarin derivative 分子名称: (1S,4S,5S,6R,9S,11S)-6-CHLORO-9-FORMYL-13-ISOPROPYL-5-METHYL-2-({[(3AR,5R,7R ,7AS)-7-METHYL-3-METHYLENEHEXAHYDRO-2H-FURO[2,3-C]PYRAN-5-YL]OXY}METHYL)TETR ACYCLO[7.4.0.02,11.04,8]TRIDEC-12-ENE-1-CARBOXYLIC ACI, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE 著者 Soe, R, Mosley, R.T, Andersen, G.R. 登録日 2006-10-27 公開日 2006-11-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2 J.Biol.Chem., 282, 2007
2NPF	Structure of eEF2 in complex with moriniafungin 分子名称: (1S,4R,5R,9S,11S)-2-({[(2S,5R,6R,7R,9S,10R)-2-(7-CARBOXYHEPTYL)-6-HYDROXY-10-METHOXY-9-METHYL-3-OXO-1,4,8-TRIOXASPIRO[4 .5]DEC-7-YL]OXY}METHYL)-9-FORMYL-13-ISOPROPYL-5-METHYLTETRACYCLO[7.4.0.02,11.04.8]TRIDEC-12-ENE-1-CARBOXYLIC ACID, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE 著者 Soe, R, Mosley, R.T, Andersen, G.R. 登録日 2006-10-27 公開日 2006-11-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2 J.Biol.Chem., 282, 2007
2P8Z	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP:sordarin cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2P8W	Fitted structure of eEF2 in the 80S:eEF2:GDPNP cryo-EM reconstruction 分子名称: Elongation factor 2, Elongation factor Tu-B, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (11.3 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2P8X	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDPNP cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Elongation factor Tu-B, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (9.7 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2P8Y	Fitted structure of ADPR-eEF2 in the 80S:ADPR-eEF2:GDP:sordarin cryo-EM reconstruction 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Taylor, D.J, Nilsson, J, Merrill, A.R, Andersen, G.R, Nissen, P, Frank, J. 登録日 2007-03-23 公開日 2007-05-08 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (11.7 Å) 主引用文献 Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. Embo J., 26, 2007
2H5E	Crystal structure of E.coli polypeptide release factor RF3 分子名称: GUANOSINE-5'-DIPHOSPHATE, Peptide chain release factor RF-3 著者 Song, H.W, Zhou, Z.H. 登録日 2006-05-26 公開日 2007-05-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors Cell(Cambridge,Mass.), 129, 2007
2O0F	Docking of the modified RF3 X-ray structure into cryo-EM map of E.coli 70S ribosome bound with RF3 分子名称: Peptide chain release factor 3 著者 Gao, H, Zhou, Z, Rawat, U, Huang, C, Bouakaz, L, Wang, C, Liu, Y, Zavialov, A, Gursky, R, Sanyal, S, Ehrenberg, M, Frank, J, Song, H. 登録日 2006-11-27 公開日 2007-07-24 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (15.5 Å) 主引用文献 RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors Cell(Cambridge,Mass.), 129, 2007
2J7K	Crystal structure of the T84A mutant EF-G:GDPCP complex 分子名称: ELONGATION FACTOR G, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER 著者 Hansson, S, Logan, D.T. 登録日 2006-10-12 公開日 2007-10-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 New Insights Into the Role of the P-Loop Lysine: Implications from the Crystal Structure of a Mutant EF-G:Gdpcp Complex To be Published

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