Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3LEG
DownloadVisualize
BU of 3leg by Molmil
Lectin Domain of Lectinolysin complexed with Lewis Y Antigen
Descriptor: CALCIUM ION, NICKEL (II) ION, Platelet aggregation factor Sm-hPAF, ...
Authors:Feil, S.C.
Deposit date:2010-01-14
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of the lectin regulatory domain of the cholesterol-dependent cytolysin lectinolysin reveals the basis for its lewis antigen specificity.
Structure, 20, 2012
1IQD
DownloadVisualize
BU of 1iqd by Molmil
Human Factor VIII C2 Domain complexed to human monoclonal BO2C11 Fab.
Descriptor: HUMAN FACTOR VIII, HUMAN MONOCLONAL BO2C11 FAB HEAVY CHAIN, HUMAN MONOCLONAL BO2C11 FAB LIGHT CHAIN
Authors:Spiegel Jr, P.C, Jacquemin, M, Saint-Remy, J.M, Stoddard, B.L, Pratt, K.P.
Deposit date:2001-07-21
Release date:2001-08-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a factor VIII C2 domain-immunoglobulin G4kappa Fab complex: identification of an inhibitory antibody epitope on the surface of factor VIII.
Blood, 98, 2001
3NNG
DownloadVisualize
BU of 3nng by Molmil
Crystal structure of the F5/8 type C domain of Q5LFR2_BACFN protein from Bacteroides fragilis. Northeast Structural Genomics Consortium Target BfR258E
Descriptor: CALCIUM ION, uncharacterized protein
Authors:Vorobiev, S, Su, M, Dimaio, F, Baker, D, Seetharaman, J, Janjua, J, Xiao, R, Ciccosanti, C, Foote, E.L, Lee, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-06-23
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.177 Å)
Cite:Crystal structure of the F5/8 type C domain of Q5LFR2_BACFN protein from Bacteroides fragilis.
To be Published
1K12
DownloadVisualize
BU of 1k12 by Molmil
Fucose Binding lectin
Descriptor: CALCIUM ION, CHLORIDE ION, LECTIN, ...
Authors:Bianchet, M.A, Odom, E.W, Vasta, G.R, Amzel, L.M.
Deposit date:2001-09-23
Release date:2002-07-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A novel fucose recognition fold involved in innate immunity.
Nat.Struct.Biol., 9, 2002
1KEX
DownloadVisualize
BU of 1kex by Molmil
Crystal Structure of the b1 Domain of Human Neuropilin-1
Descriptor: Neuropilin-1
Authors:Lee, C.C, Kreusch, A, McMullan, D, Ng, K, Spraggon, G.
Deposit date:2001-11-18
Release date:2003-01-28
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of the Human Neuropilin-1 b1 Domain
Structure, 11, 2003
4P5Y
DownloadVisualize
BU of 4p5y by Molmil
Structure of CBM32-3 from a family 31 glycoside hydrolase from Clostridium perfringens in complex with N-acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, Glycosyl hydrolase, ...
Authors:Grondin, J.M, Allingham, J.S, Boraston, A.B, Smith, S.P.
Deposit date:2014-03-04
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Diverse modes of galacto-specific carbohydrate recognition by a family 31 glycoside hydrolase from Clostridium perfringens.
PLoS ONE, 12, 2017
4PT6
DownloadVisualize
BU of 4pt6 by Molmil
The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
Descriptor: Coagulation factor VIII
Authors:Kym, G, Shi, K, Kamajaya, A, Hamdouche, S, Kostecki, J.S, Wannier, T, Li, B, Nikolovski, P, Mayo, S.L.
Deposit date:2014-03-10
Release date:2015-04-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
To be Published
4QDQ
DownloadVisualize
BU of 4qdq by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: GLYCEROL, Neuropilin-2, SULFATE ION
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4QDR
DownloadVisualize
BU of 4qdr by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: Neuropilin-2
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4QDS
DownloadVisualize
BU of 4qds by Molmil
Physical basis for Nrp2 ligand binding
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-2
Authors:Parker, M.W, Vander Kooi, C.W.
Deposit date:2014-05-14
Release date:2015-04-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for VEGF-C Binding to Neuropilin-2 and Sequestration by a Soluble Splice Form.
Structure, 23, 2015
4A45
DownloadVisualize
BU of 4a45 by Molmil
CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, ...
Authors:Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
Deposit date:2011-10-06
Release date:2012-04-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A41
DownloadVisualize
BU of 4a41 by Molmil
CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose
Descriptor: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, SODIUM ION, ...
Authors:Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
Deposit date:2011-10-06
Release date:2012-04-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A44
DownloadVisualize
BU of 4a44 by Molmil
CpGH89CBM32-5, from Clostridium perfringens, in complex with the Tn Antigen
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Alpha-N-acetylglucosaminidase, CALCIUM ION, ...
Authors:Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
Deposit date:2011-10-06
Release date:2012-04-04
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4AAX
DownloadVisualize
BU of 4aax by Molmil
CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE, CALCIUM ION, ...
Authors:Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
Deposit date:2011-12-05
Release date:2012-04-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A42
DownloadVisualize
BU of 4a42 by Molmil
CpGH89CBM32-6 produced by Clostridium perfringens
Descriptor: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION
Authors:Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
Deposit date:2011-10-06
Release date:2012-04-04
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4RN5
DownloadVisualize
BU of 4rn5 by Molmil
B1 domain of human Neuropilin-1 with acetate ion in a ligand-binding site
Descriptor: ACETATE ION, GLYCEROL, Neuropilin-1, ...
Authors:Allerston, C.K, Yelland, T.S, Jarvis, A, Jenkins, K, Winfield, N, Cheng, L, Jia, H, Zachary, I, Selwood, D.L, Djordjevic, S.
Deposit date:2014-10-23
Release date:2015-10-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Conserved water molecules in a ligand-binding site of neuropilin-1
To be Published
4TXW
DownloadVisualize
BU of 4txw by Molmil
Crystal structure of CBM32-4 from the Clostridium perfringens NagH
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Hyaluronoglucosaminidase
Authors:Grondin, J.M, Ficko-Blean, E, Boraston, A.B, Smith, S.P.
Deposit date:2014-07-07
Release date:2015-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Solution Structure and Dynamics of Full-length GH84A, a multimodular B-N-acetylglucosaminidase from Clostridium perfringens
To Be Published
2J1V
DownloadVisualize
BU of 2j1v by Molmil
Structure of a Streptococcus pneumoniae fucose binding module in complex with the blood group H-trisaccharide
Descriptor: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Boraston, A.B, Wang, D, Burke, R.D.
Deposit date:2006-08-15
Release date:2006-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
7BLJ
DownloadVisualize
BU of 7blj by Molmil
Structure of CBM BT3015C from Bacteroides thetaiotaomicron in complex with O-GalNAc core 2-Thr
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, THREONINE, ...
Authors:Costa, R.L.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural basis for mucin-type O-glycan recognition by proteins of a Bacteroides thetaiotaomicron polysaccharide utilization loci
To Be Published
7BLK
DownloadVisualize
BU of 7blk by Molmil
Structure of CBM BT3015C from Bacteroides thetaiotaomicron
Descriptor: CALCIUM ION, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron
Authors:Costa, R.L.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Structural basis for mucin-type O-glycan recognition by proteins of a Bacteroides thetaiotaomicron polysaccharide utilization loci
To Be Published
2J22
DownloadVisualize
BU of 2j22 by Molmil
Structure of a Streptococcus pneumoniae fucose binding module, SpX-3
Descriptor: CALCIUM ION, FUCOLECTIN-RELATED PROTEIN, GLYCEROL
Authors:Boraston, A.B, Wang, D, Burke, R.D.
Deposit date:2006-08-15
Release date:2006-09-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Blood Group Antigen Recognition by a Streptococcus Pneumoniae Virulence Factor
J.Biol.Chem., 281, 2006
7BLG
DownloadVisualize
BU of 7blg by Molmil
Structure of CBM BT3015C from Bacteroides thetaiotaomicron in complex with galactose
Descriptor: CALCIUM ION, beta-D-galactopyranose, family 32 carbohydrate-binding module from Bacteroides thetaiotaomicron
Authors:Costa, R.L.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Structural basis for mucin-type O-glycan recognition by proteins of a Bacteroides thetaiotaomicron polysaccharide utilization loci
To Be Published
7BLH
DownloadVisualize
BU of 7blh by Molmil
Structure of CBM BT3015C from Bacteroides thetaiotaomicron in complex with O-GalNAc core 1-Thr
Descriptor: CALCIUM ION, THREONINE, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose, ...
Authors:Costa, R.L, Carvalho, A.L.
Deposit date:2021-01-18
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis for mucin-type O-glycan recognition by proteins of a Bacteroides thetaiotaomicron polysaccharide utilization loci
To Be Published
2JDA
DownloadVisualize
BU of 2jda by Molmil
Structure of a pectin binding carbohydrate binding module determined in an monoclinic crystal form.
Descriptor: CALCIUM ION, GLYCEROL, SULFATE ION, ...
Authors:Abbott, D.W, Boraston, A.B.
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Identification and Characterization of a Novel Periplasmic Polygalacturonic Acid Binding Protein from Yersinia Enterolitica
J.Mol.Biol., 367, 2007
2JD9
DownloadVisualize
BU of 2jd9 by Molmil
Structure of a pectin binding carbohydrate binding module determined in an orthorhombic crystal form.
Descriptor: CALCIUM ION, YECBM32
Authors:Abbott, D.W, Boraston, A.B.
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification and Characterization of a Novel Periplasmic Polygalacturonic Acid Binding Protein from Yersinia Enterolitica
J.Mol.Biol., 367, 2007

220113

数据于2024-05-22公开中

PDB statisticsPDBj update infoContact PDBjnumon