PDB: 462 件ウェブページステータス検索Chemie searchBIRD

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4R71	Structure of the Qbeta holoenzyme complex in the P1211 crystal form 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu, ... 著者 Gytz, H, Seweryn, P, Kutlubaeva, Z, Chetverin, A.B, Brodersen, D.E, Knudsen, C.R. 登録日 2014-08-26 公開日 2015-09-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Structural basis for RNA-genome recognition during bacteriophage Q beta replication. Nucleic Acids Res., 43, 2015
4QJF	X-ray crystal structure of Thermocuccus kodakarensis RNA polymerase Rpp4/Rpo7 (RpoF/RpoE) complex 分子名称: DNA-directed RNA polymerase, subunit E', subunit F 著者 Murakami, K.S. 登録日 2014-06-03 公開日 2014-10-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.312 Å) 主引用文献 Crystal structure of euryarchaeal RNA polymerase and insight into the evolution of RNA polymerase II structure Nat.Commun., 2014
4QIW	Crystal structure of euryarchaeal RNA polymerase from Thermococcus kodakarensis 分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ... 著者 Jun, S.-H, Murakami, K.S. 登録日 2014-06-02 公開日 2014-10-08 最終更新日 2014-11-26 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration. Nat Commun, 5, 2014
4Q7J	Complex structure of viral RNA polymerase 分子名称: 30S ribosomal protein S1, Elongation factor Ts, Elongation factor Tu 1, ... 著者 Takeshita, D. 登録日 2014-04-25 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Molecular insights into replication initiation by Q beta replicase using ribosomal protein S1. Nucleic Acids Res., 42, 2014
4NNG	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNH	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNK	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NNI	Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide 分子名称: 30S ribosomal protein S1, PYRAZINE-2-CARBOXYLIC ACID 著者 Yang, J, Liu, Y, Cai, Q, Lin, D. 登録日 2013-11-18 公開日 2014-12-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide. Mol.Microbiol., 95, 2015
4NBQ	Structure of the polynucleotide phosphorylase (CBU_0852) from Coxiella burnetii 分子名称: Polyribonucleotide nucleotidyltransferase, SULFATE ION 著者 Rudolph, M.J, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2013-10-23 公開日 2015-06-17 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.9138 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
4MTN	Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 分子名称: SULFATE ION, Transcription termination factor NusA 著者 Chang, C, Hatzos-Skintges, C, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-09-19 公開日 2013-10-02 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (2.579 Å) 主引用文献 Crystal structure of transcription termination factor NusA from Planctomyces limnophilus DSM 3776 TO BE PUBLISHED
4BY7	elongating RNA Polymerase II-Bye1 TLD complex 分子名称: , 5'-D(*DAP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*DTP)-3', 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-18 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
4BY1	elongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPP 分子名称: 5'-D(*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP *TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*AP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-17 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BXZ	RNA Polymerase II-Bye1 complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-16 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (4.8 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BXX	Arrested RNA polymerase II-Bye1 complex 分子名称: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*AP*CP*CP*TP*GP *GP*TP*GP* BRUP*TP*GP*CP*TP*CP*TP*AP*AP*DC)-3', 5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP)-3', 5'-D(*GP*AP*GP*GP*TP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-16 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BBS	Structure of an initially transcribing RNA polymerase II-TFIIB complex 分子名称: 5'-D(*AP*GP*CP*GP*CP*AP*GP*TP*TP*GP*TP*GP*CP*TP *AP*TP*GP*AP*TP*AP*TP*TP*TP*TP*TP*AP*TP)-3', 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*CP*TP)-3', 5'-R(*AP*UP*AP*UP*CP*AP)-3', ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
4BBR	Structure of RNA polymerase II-TFIIB complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
4V8S	Archaeal RNAP-DNA binary complex at 4.32Ang 分子名称: 5'-D(*AP*TP*AP*GP*AP*GP*TP*AP*TP*AP*AP*GP*AP*TP *AP*G)-3', 5'-D(*TP*CP*TP*TP*AP*TP*AP*CP*TP*CP*TP*AP*TP*CP)-3', DNA-DIRECTED RNA POLYMERASE, ... 著者 Wojtas, M.N, Mogni, M, Millet, O, Bell, S.D, Abrescia, N.G.A. 登録日 2012-07-12 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (4.323 Å) 主引用文献 Structural and Functional Analyses of the Interaction of Archaeal RNA Polymerase with DNA. Nucleic Acids Res., 40, 2012
4AYB	RNAP at 3.2Ang 分子名称: DNA-DIRECTED RNA POLYMERASE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... 著者 Wojtas, M.N, Mogni, M, Millet, O, Bell, S.D, Abrescia, N.G.A. 登録日 2012-06-19 公開日 2012-08-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.202 Å) 主引用文献 Structural and Functional Analyses of the Interaction of Archaeal RNA Polymerase with DNA. Nucleic Acids Res., 40, 2012
3J1N	Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module 分子名称: DNA-directed RNA polymerase II subunit RPABC1, DNA-directed RNA polymerase II subunit RPABC2, DNA-directed RNA polymerase II subunit RPABC3, ... 著者 Asturias, F.J, Imasaki, T. 登録日 2012-03-29 公開日 2013-03-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (16 Å) 主引用文献 Interaction of the mediator head module with RNA polymerase II. Structure, 20, 2012
4AM3	Crystal structure of C. crescentus PNPase bound to RNA 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RNA, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-03-07 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
4AIM	Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-02-10 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
4AID	Crystal structure of C. crescentus PNPase bound to RNase E recognition peptide 分子名称: PHOSPHATE ION, POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE, RIBONUCLEASE, ... 著者 Hardwick, S.W, Gubbey, T, Hug, I, Jenal, U, Luisi, B.F. 登録日 2012-02-09 公開日 2012-04-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Caulobacter Crescentus Polynucleotide Phosphorylase Reveals a Mechanism of RNA Substrate Channelling and RNA Degradosome Assembly. Open Biol., 2, 2012
3V11	Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNA 分子名称: Initiator tRNA, MAGNESIUM ION, METHIONINE, ... 著者 Mechulam, Y, Schmitt, E. 登録日 2011-12-09 公開日 2012-03-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (5 Å) 主引用文献 Structure of the ternary initiation complex aIF2-GDPNP-methionylated initiator tRNA. Nat.Struct.Mol.Biol., 19, 2012
4A93	RNA Polymerase II elongation complex containing a CPD Lesion 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*T*TTP*TP*TP*CP*C BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP*AP)-3', ... 著者 Walmacq, C, Cheung, A.C.M, Kireeva, M.L, Lubkowska, L, Ye, C, Gotte, D, Strathern, J.N, Carell, T, Cramer, P, Kashlev, M. 登録日 2011-11-23 公開日 2012-03-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Mechanism of Translesion Transcription by RNA Polymerase II and its Role in Cellular Resistance to DNA Damage. Mol.Cell, 46, 2012
3J0K	Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ... 著者 Bernecky, C, Grob, P, Ebmeier, C.C, Nogales, E, Taatjes, D.J. 登録日 2011-10-04 公開日 2011-10-19 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (36 Å) 主引用文献 Molecular architecture of the human Mediator-RNA polymerase II-TFIIF assembly. Plos Biol., 9, 2011

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