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2VNQ
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Monoclinic form of IDI-1
分子名称: IMIDAZOLE, ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE, MANGANESE (II) ION, ...
著者de Ruyck, J, Oudjama, Y, Wouters, J.
登録日2008-02-06
公開日2008-03-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Monoclinic Form of Isopentenyl Diphosphate Isomerase: A Case of Polymorphism in Biomolecular Crystals.
Acta Crystallogr.,Sect.F, 64, 2008
2VNP
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Monoclinic form of IDI-1
分子名称: 2-DIMETHYLAMINO-ETHYL-DIPHOSPHATE, ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE, MAGNESIUM ION, ...
著者de Ruyck, J, Oudjama, Y, Wouters, J.
登録日2008-02-06
公開日2008-03-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Monoclinic Form of Isopentenyl Diphosphate Isomerase: A Case of Polymorphism in Biomolecular Crystals.
Acta Crystallogr.,Sect.F, 64, 2008
2XSQ
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Crystal structure of human Nudix motif 16 (NUDT16) in complex with IMP and magnesium
分子名称: CHLORIDE ION, INOSINIC ACID, MAGNESIUM ION, ...
著者Tresaugues, L, Welin, M, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kol, S, Kotenyova, T, Kouznetsova, E, Moche, M, Nyman, T, Persson, C, Schuler, H, Schutz, P, Siponen, M.I, Thorsell, A.G, van den Berg, S, Wahlberg, E, Weigelt, J, Nordlund, P.
登録日2010-09-29
公開日2010-11-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis for the Specificity of Human Nudt16 and its Regulation by Inosine Monophosphate.
Plos One, 10, 2015
4HVY
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A thermostable variant of human NUDT18 NUDIX domain obtained by Hot Colony Filtration
分子名称: GLYCEROL, MAGNESIUM ION, Nucleoside diphosphate-linked moiety X motif 18, ...
著者Asial, I, Cheng, Y.X, Engman, H, Wu, B, Dollhopf, M, Nordlund, P, Cornvik, T.
登録日2012-11-07
公開日2014-01-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Engineering protein thermostability using a generic activity-independent biophysical screen inside the cell.
Nat Commun, 4, 2013
2YVO
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Crystal structure of NDX2 in complex with MG2+ and AMP from thermus thermophilus HB8
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MutT/nudix family protein
著者Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-13
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YYH
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Crystal structure of Nudix family protein from Aquifex aeolicus
分子名称: 8-OXO-dGTPase domain
著者Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-30
公開日2007-11-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Nudix family protein from Aquifex aeolicus
To be Published
2YVP
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Crystal structure of NDX2 in complex with MG2+ and ampcpr from thermus thermophilus HB8
分子名称: MAGNESIUM ION, METHYLENE ADP-BETA-XYLOSE, MutT/nudix family protein
著者Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-13
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVN
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Crystal structure of NDX2 from thermus thermophilus HB8
分子名称: MutT/nudix family protein
著者Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-13
公開日2008-02-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
2YVM
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Crystal structure of NDX2 in complex with MG2+ from thermus thermophilus HB8
分子名称: MAGNESIUM ION, MutT/nudix family protein
著者Wakamatsu, T, Nakagawa, N, Kuramitsu, S, Yokoyama, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-13
公開日2008-02-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for different substrate specificities of two ADP-ribose pyrophosphatases from Thermus thermophilus HB8
J.Bacteriol., 190, 2008
4ICK
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Crystal structure of human AP4A hydrolase E58A mutant
分子名称: Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical], GLYCEROL, MAGNESIUM ION, ...
著者Ge, H, Chen, X.
登録日2012-12-10
公開日2013-12-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of wild-type and mutant human Ap4A hydrolase.
Biochem.Biophys.Res.Commun., 432, 2013
4IJX
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Crystal structure of human Ap4A hydrolase E58A mutant complexed with DPO
分子名称: Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical], DIPHOSPHATE, GLYCEROL, ...
著者Ge, H, Chen, X.
登録日2012-12-24
公開日2013-03-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of wild-type and mutant human Ap4A hydrolase.
Biochem.Biophys.Res.Commun., 432, 2013
4ILQ
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2.60A resolution structure of CT771 from Chlamydia trachomatis
分子名称: CT771, GLYCEROL, SULFATE ION
著者Barta, M.L, Lovell, S, Battaile, K.P, Hefty, P.S.
登録日2012-12-31
公開日2014-01-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Chlamydia trachomatis CT771 (nudH) Is an Asymmetric Ap4A Hydrolase.
Biochemistry, 53, 2014
3A6V
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Crystal structure of the MutT protein in MN(II) bound holo form
分子名称: L(+)-TARTARIC ACID, MANGANESE (II) ION, Mutator mutT protein, ...
著者Nakamura, T, Yamagata, Y.
登録日2009-09-09
公開日2009-10-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and dynamic features of the MutT protein in the recognition of nucleotides with the mutagenic 8-oxoguanine base
J.Biol.Chem., 285, 2010
4JZT
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Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant) bound to GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, dGTP pyrophosphohydrolase
著者Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
登録日2013-04-03
公開日2013-05-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZV
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Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH bound to a non-hydrolysable triphosphorylated dinucleotide RNA (pcp-pGpG) - second guanosine residue in guanosine binding pocket
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, RNA (5'-R(*(GCP)P*G)-3'), ...
著者Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
登録日2013-04-03
公開日2013-05-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZS
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BU of 4jzs by Molmil
Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH (E68A mutant)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, dGTP pyrophosphohydrolase
著者Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
登録日2013-04-03
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JZU
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Crystal structure of the Bacillus subtilis pyrophosphohydrolase BsRppH bound to a non-hydrolysable triphosphorylated dinucleotide RNA (pcp-pGpG) - first guanosine residue in guanosine binding pocket
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, RNA (5'-R(*(GCP)P*G)-3'), RNA PYROPHOSPHOHYDROLASE
著者Piton, J, Larue, V, Thillier, Y, Dorleans, A, Pellegrini, O, Li de la Sierra-Gallay, I, Vasseur, J.J, Debart, F, Tisne, C, Condon, C.
登録日2013-04-03
公開日2013-05-08
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates.
Proc.Natl.Acad.Sci.USA, 110, 2013
4KG4
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Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain (E198Q mutation)
分子名称: mRNA-decapping enzyme subunit 2
著者Aglietti, R.A, Floor, S.N, Gross, J.D.
登録日2013-04-28
公開日2013-08-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Active site conformational dynamics are coupled to catalysis in the mRNA decapping enzyme dcp2.
Structure, 21, 2013
2O1C
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BU of 2o1c by Molmil
Structure of the E. coli dihydroneopterin triphosphate pyrophosphohydrolase
分子名称: PYROPHOSPHATE, SULFATE ION, dATP pyrophosphohydrolase
著者Gabelli, S.B, Bianchet, M.A, Amzel, L.M.
登録日2006-11-28
公開日2007-08-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and function of the E. coli dihydroneopterin triphosphate pyrophosphatase: a Nudix enzyme involved in folate biosynthesis.
Structure, 15, 2007
2O5F
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Crystal Structure of DR0079 from Deinococcus radiodurans at 1.9 Angstrom Resolution
分子名称: Putative Nudix hydrolase DR_0079
著者Kennedy, M.A, Buchko, G.W, Ni, S, Robinson, H.
登録日2006-12-05
公開日2007-12-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Functional and Structural Characterization of DR_0079 from Deinococcus radiodurans, a Novel Nudix Hydrolase with a Preference for Cytosine (Deoxy)ribonucleoside 5'-Di- and Triphosphates.
Biochemistry, 47, 2008
2O5W
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Structure of the E. coli dihydroneopterin triphosphate pyrophosphohydrolase in complex with Sm+3 and pyrophosphate
分子名称: PYROPHOSPHATE, SAMARIUM (III) ION, SODIUM ION, ...
著者Gabelli, S.B, Bianchet, M.A, Amzel, L.M.
登録日2006-12-06
公開日2007-08-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of the E. coli dihydroneopterin triphosphate pyrophosphatase: a Nudix enzyme involved in folate biosynthesis.
Structure, 15, 2007
2PNY
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Structure of Human Isopentenyl-diphosphate Delta-isomerase 2
分子名称: CALCIUM ION, GLYCEROL, Isopentenyl-diphosphate Delta-isomerase 2, ...
著者Walker, J.R, Davis, T, Butler-Cole, C, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2007-04-25
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structure of the human Isopentenyl-diphosphate Delta-isomerase 2.
To be Published
2PQV
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Crystal structure of MutT/nudix family protein from Streptococcus pneumoniae
分子名称: MutT/nudix family protein, PHOSPHATE ION
著者Chang, C, Binkowski, T.A, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-05-02
公開日2007-06-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Crystal structure of MutT/nudix family protein from Streptococcus pneumoniae.
To be Published
2Q9P
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Human diphosphoinositol polyphosphate phosphohydrolase 1, Mg-F complex
分子名称: CHLORIDE ION, Diphosphoinositol polyphosphate phosphohydrolase 1, FLUORIDE ION, ...
著者Thorsell, A.G, Busam, R, Arrowsmith, C.H, Berglund, H, Collins, R, Dahlgren, L.G, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Holmberg-Schiavone, L, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nordlund, P, Nyman, T, Ogg, D, Sagemark, J, Sundstrom, M, Van den Berg, S, Weigelt, J, Welin, M, Persson, C, Hallberg, B.M, Structural Genomics Consortium (SGC)
登録日2007-06-13
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of human diphosphoinositol phosphatase 1.
Proteins, 77, 2009
2RRK
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Solution structure of the E. coli ORF135 protein
分子名称: CTP pyrophosphohydrolase
著者Kawasaki, K, Mishima, M.
登録日2011-01-01
公開日2012-01-18
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of the E. coli ORF135 protein
To be Published

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