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5YFM
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BU of 5yfm by Molmil
Human isocitrate dehydrogenase 1 bound with NADP
Descriptor: Isocitrate dehydrogenase [NADP] cytoplasmic, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Nordlund, P, Chen, D, Jansson, A, Larsson, A.
Deposit date:2017-09-21
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human isocitrate dehydrogenase 1 bound with NADP
To Be Published
5SVF
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BU of 5svf by Molmil
IDH1 R132H in complex with IDH125
Descriptor: (4S)-3-(2-{[(1S)-1-phenylethyl]amino}pyrimidin-4-yl)-4-(propan-2-yl)-1,3-oxazolidin-2-one, CITRATE ANION, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Xie, X, Kulathila, R.
Deposit date:2016-08-05
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Allosteric Mutant IDH1 Inhibitors Reveal Mechanisms for IDH1 Mutant and Isoform Selectivity.
Structure, 25, 2017
5SVO
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BU of 5svo by Molmil
Structure of IDH2 mutant R140Q
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Isocitrate dehydrogenase [NADP], mitochondrial, ...
Authors:Xie, X, Kulathila, R.
Deposit date:2016-08-06
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Allosteric Mutant IDH1 Inhibitors Reveal Mechanisms for IDH1 Mutant and Isoform Selectivity.
Structure, 25, 2017
6IO0
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BU of 6io0 by Molmil
Human IDH1 R132C mutant complexed with compound A.
Descriptor: (2E)-3-{3-[3-(2,6-dichlorophenyl)-5-(propan-2-yl)-1,2-oxazole-4-carbonyl]-1-methyl-1H-indol-7-yl}prop-2-enoic acid, CITRIC ACID, GLYCEROL, ...
Authors:Suzuki, M, Baba, D, Hanzawa, H.
Deposit date:2018-10-29
Release date:2019-10-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Potent Blood-Brain Barrier-Permeable Mutant IDH1 Inhibitor Suppresses the Growth of Glioblastoma with IDH1 Mutation in a Patient-Derived Orthotopic Xenograft Model.
Mol.Cancer Ther., 19, 2020
5SVN
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BU of 5svn by Molmil
Structure of IDH2 mutant R172K
Descriptor: DI(HYDROXYETHYL)ETHER, Isocitrate dehydrogenase [NADP], mitochondrial, ...
Authors:Xie, X, Kulathila, R.
Deposit date:2016-08-06
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Allosteric Mutant IDH1 Inhibitors Reveal Mechanisms for IDH1 Mutant and Isoform Selectivity.
Structure, 25, 2017
1P8F
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BU of 1p8f by Molmil
A four location model to explain the stereospecificity of proteins.
Descriptor: GLYCEROL, ISOCITRIC ACID, Isocitrate dehydrogenase [NADP], ...
Authors:Mesecar, A.D, Koshland Jr, D.E.
Deposit date:2003-05-07
Release date:2003-05-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural biology: A new model for protein stereospecificity.
Nature, 403, 2000
6IXL
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BU of 6ixl by Molmil
Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri
Descriptor: GLYCEROL, Isocitrate dehydrogenase, SULFATE ION
Authors:Zhu, G.P, Tang, W.G, Wang, P.
Deposit date:2018-12-11
Release date:2019-12-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of NAD + -linked isocitrate dehydrogenase from the green alga Ostreococcus tauri and its evolutionary relationship with eukaryotic NADP + -linked homologs.
Arch.Biochem.Biophys., 708, 2021
6IXN
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BU of 6ixn by Molmil
Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri in complex with NAD+ and citrate
Descriptor: CITRATE ANION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Zhu, G.P, Tang, W.G, Wang, P.
Deposit date:2018-12-11
Release date:2019-12-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structures of NAD + -linked isocitrate dehydrogenase from the green alga Ostreococcus tauri and its evolutionary relationship with eukaryotic NADP + -linked homologs.
Arch.Biochem.Biophys., 708, 2021
1OSJ
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BU of 1osj by Molmil
STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T.
Deposit date:1996-10-22
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.
Protein Eng., 10, 1997
5SUN
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BU of 5sun by Molmil
IDH1 R132H in complex with IDH146
Descriptor: 1,2-ETHANEDIOL, 3-benzyl-N-[3-(dimethylsulfamoyl)phenyl]-4-oxo-3,4-dihydrophthalazine-1-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Xie, X, Kulathila, R.
Deposit date:2016-08-03
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.477 Å)
Cite:Allosteric Mutant IDH1 Inhibitors Reveal Mechanisms for IDH1 Mutant and Isoform Selectivity.
Structure, 25, 2017
5YFN
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BU of 5yfn by Molmil
Human isocitrate dehydrogenase 1 bound with isocitrate
Descriptor: ISOCITRIC ACID, Isocitrate dehydrogenase [NADP] cytoplasmic, MAGNESIUM ION, ...
Authors:Nordlund, P, Chen, D, Jansson, A, Larsson, A.
Deposit date:2017-09-21
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human isocitrate dehydrogenase 1 bound with isocitrate
To Be Published
1OSI
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BU of 1osi by Molmil
STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE
Authors:Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T.
Deposit date:1996-10-22
Release date:1997-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase.
Protein Eng., 10, 1997
1PB1
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BU of 1pb1 by Molmil
A four location model to explain the stereospecificity of proteins.
Descriptor: GLYCEROL, ISOCITRIC ACID, Isocitrate dehydrogenase [NADP], ...
Authors:Mesecar, A.D, Koshland Jr, D.E.
Deposit date:2003-05-14
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Biology: A New Model for Protein Stereospecificity.
Nature, 403, 2000
1PB3
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BU of 1pb3 by Molmil
Sites of binding and orientation in a four location model for protein stereospecificity.
Descriptor: GLYCEROL, Isocitrate dehydrogenase [NADP], SULFATE ION
Authors:Mesecar, A.D, Koshland Jr, D.E.
Deposit date:2003-05-14
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Sites of Binding and Orientation in a Four-Location Model for Protein Stereospecificity.
IUBMB Life, 49, 2000
2UXR
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BU of 2uxr by Molmil
Complex with isocitrate and the protein isocitrate dehydrogenase from the psychrophilic bacterium Desulfotalea psychrophila
Descriptor: GLYCEROL, ISOCITRATE DEHYDROGENASE, ISOCITRIC ACID, ...
Authors:Fedoy, A.-E, Yang, N, Martinez, A, Leiros, H.-K.S, Steen, I.H.
Deposit date:2007-03-29
Release date:2008-02-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Properties of Isocitrate Dehydrogenase from the Psychrophilic Bacterium Desulfotalea Psychrophila Reveal a Cold -Active Enzyme with an Unusual High Thermal
J.Mol.Biol., 372, 2007
2UXQ
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BU of 2uxq by Molmil
Isocitrate dehydrogenase from the psychrophilic bacterium Desulfotalea psychrophila: biochemical properties and crystal structure analysis
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, ISOCITRATE DEHYDROGENASE NATIVE, ...
Authors:Fedoy, A.-E, Yang, N, Martinez, A, Leiros, H.-K.S, Steen, I.H.
Deposit date:2007-03-29
Release date:2008-02-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural and Functional Properties of Isocitrate Dehydrogenase from the Psychrophilic Bacterium Desulfotalea Psychrophila Reveal a Cold -Active Enzyme with an Unusual High Thermal
J.Mol.Biol., 372, 2007
6IXT
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BU of 6ixt by Molmil
Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri in complex with NAD+ and Mg2+
Descriptor: GLYCEROL, Isocitrate dehydrogenase, MAGNESIUM ION, ...
Authors:Zhu, G.P, Tang, W.G, Wang, P.
Deposit date:2018-12-12
Release date:2019-12-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structures of NAD + -linked isocitrate dehydrogenase from the green alga Ostreococcus tauri and its evolutionary relationship with eukaryotic NADP + -linked homologs.
Arch.Biochem.Biophys., 708, 2021
4L04
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BU of 4l04 by Molmil
Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, CALCIUM ION, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Concha, N.O, Smallwood, A.M.
Deposit date:2013-05-30
Release date:2013-07-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism.
Biochemistry, 52, 2013
4KZO
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BU of 4kzo by Molmil
Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, CALCIUM ION, ...
Authors:Concha, N.O, Smallwood, A.M.
Deposit date:2013-05-30
Release date:2013-07-17
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism.
Biochemistry, 52, 2013
4L06
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BU of 4l06 by Molmil
Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, CALCIUM ION, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Concha, N.O, Smallwood, A.M.
Deposit date:2013-05-30
Release date:2013-07-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.282 Å)
Cite:Mutant IDH1 Enhances the Production of 2-Hydroxyglutarate Due to Its Kinetic Mechanism.
Biochemistry, 52, 2013
5YVT
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BU of 5yvt by Molmil
Crystal structure of the alpha gamma heterodimer of human IDH3 in complex with Mg(2+) and NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, ...
Authors:Ma, T, Ding, J.
Deposit date:2017-11-27
Release date:2018-03-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights into the inhibitory mechanisms of NADH on the alpha gamma heterodimer of human NAD-dependent isocitrate dehydrogenase.
Sci Rep, 8, 2018
5TQH
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BU of 5tqh by Molmil
IDH1 R132H mutant in complex with IDH889
Descriptor: (4S)-3-[2-({(1S)-1-[5-(4-fluoro-3-methylphenyl)pyrimidin-2-yl]ethyl}amino)pyrimidin-4-yl]-4-(propan-2-yl)-1,3-oxazolidin-2-one, CITRATE ANION, Isocitrate dehydrogenase [NADP] cytoplasmic, ...
Authors:Xie, X, Kulathila, R.
Deposit date:2016-10-24
Release date:2017-01-25
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Optimization of 3-Pyrimidin-4-yl-oxazolidin-2-ones as Allosteric and Mutant Specific Inhibitors of IDH1.
ACS Med Chem Lett, 8, 2017
5YZI
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BU of 5yzi by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase complexed with Cadmium
Descriptor: CADMIUM ION, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cho, H.J, Kang, B.S.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.519 Å)
Cite:NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
5YZH
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BU of 5yzh by Molmil
Crystal Structure of Mouse Cytosolic Isocitrate Dehydrogenase
Descriptor: GLYCEROL, Isocitrate dehydrogenase [NADP] cytoplasmic, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cho, H.J, Kang, B.S.
Deposit date:2017-12-14
Release date:2018-07-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:NADP+-dependent cytosolic isocitrate dehydrogenase provides NADPH in the presence of cadmium due to the moderate chelating effect of glutathione.
J. Biol. Inorg. Chem., 23, 2018
4WUO
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BU of 4wuo by Molmil
Structure of the E270A Mutant Isopropylmalate dehydrogenase from Thermus thermophilus in complex with IPM, Mn and NADH
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, ETHANOL, ...
Authors:Pallo, A, Graczer, E, Olah, J, Szimler, T, Konarev, P.V, Svergun, D.I, Merli, A, Zavodszky, P, Vas, M, Weiss, M.S.
Deposit date:2014-11-03
Release date:2014-11-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Glutamate 270 plays an essential role in K(+)-activation and domain closure of Thermus thermophilus isopropylmalate dehydrogenase.
Febs Lett., 589, 2015

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