Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7MBM
DownloadVisualize
BU of 7mbm by Molmil
Cryo-EM structure of MLL1-NCP (H3K4M) complex, mode01
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Dou, Y, Cho, U.
登録日2021-04-01
公開日2021-12-29
最終更新日2022-01-19
実験手法ELECTRON MICROSCOPY
主引用文献Regulation of MLL1 Methyltransferase Activity in Two Distinct Nucleosome Binding Modes.
Biochemistry, 61, 2022
7PJ1
DownloadVisualize
BU of 7pj1 by Molmil
Solution structure of isolated Drosophila histone H2A-H2B heterodimer
分子名称: Histone H2A, Histone H2B
著者van Ingen, H, Zhang, H.
登録日2021-08-23
公開日2021-12-08
実験手法SOLUTION NMR
主引用文献Mapping the electrostatic potential of the nucleosome acidic patch.
Sci Rep, 11, 2021
6YN1
DownloadVisualize
BU of 6yn1 by Molmil
Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
分子名称: Aprataxin and PNK-like factor, CHLORIDE ION, GLYCEROL, ...
著者Corbeski, I, Guo, X, Van Ingen, H, Sixma, T.K.
登録日2020-04-10
公開日2021-11-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.
Sci Adv, 8, 2022
7E8D
DownloadVisualize
BU of 7e8d by Molmil
NSD2 E1099K mutant bound to nucleosome
分子名称: DNA (185-MER), Histone H2A type 1, Histone H2B type 1-J, ...
著者Sengoku, T, Sato, K, Nishizawa, T, Nureki, O, Ogata, K.
登録日2021-03-01
公開日2021-11-10
最終更新日2022-02-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2.
Nat Commun, 12, 2021
7M1X
DownloadVisualize
BU of 7m1x by Molmil
Cryo-EM Structure of Nucleosome containing mouse histone variant H2A.Z
分子名称: DNA (136-MER), Histone H2A.Z, Histone H2B 1.1, ...
著者Tan, D, Lewis, T.
登録日2021-03-15
公開日2021-09-29
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of chromatin regulation by histone variant H2A.Z.
Nucleic Acids Res., 49, 2021
7KBD
DownloadVisualize
BU of 7kbd by Molmil
Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (151-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBF
DownloadVisualize
BU of 7kbf by Molmil
H1.8 bound nucleosome isolated from metaphase chromosome in Xenopus egg extract (oligo fraction)
分子名称: DNA (184-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBE
DownloadVisualize
BU of 7kbe by Molmil
Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (157-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2021-11-17
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7OTQ
DownloadVisualize
BU of 7otq by Molmil
Cryo-EM structure of ALC1/CHD1L bound to a PARylated nucleosome
分子名称: Chromodomain-helicase-DNA-binding protein 1-like, DNA (149-MER) Widom 601 sequence, Histone H2A type 1, ...
著者Bacic, L, Gaullier, G, Deindl, S.
登録日2021-06-10
公開日2021-09-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure and dynamics of the chromatin remodeler ALC1 bound to a PARylated nucleosome
Elife, 10, 2021
7D69
DownloadVisualize
BU of 7d69 by Molmil
Cryo-EM structure of the nucleosome containing Giardia histones
分子名称: 601L DNA (145-MER), Histone H2A, Histone H2B, ...
著者Sato, S, Takizawa, Y, Kurumizaka, H.
登録日2020-09-29
公開日2021-09-08
最終更新日2022-03-23
実験手法ELECTRON MICROSCOPY (3.57 Å)
主引用文献Cryo-EM structure of the nucleosome core particle containing Giardia lamblia histones.
Nucleic Acids Res., 49, 2021
7NKX
DownloadVisualize
BU of 7nkx by Molmil
RNA polymerase II-Spt4/5-nucleosome-Chd1 structure
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromatin elongation factor SPT4, ...
著者Farnung, L, Ochmann, M, Engeholm, M, Cramer, P.
登録日2021-02-19
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of nucleosome transcription mediated by Chd1 and FACT.
Nat.Struct.Mol.Biol., 28, 2021
7NL0
DownloadVisualize
BU of 7nl0 by Molmil
Cryo-EM structure of the Lin28B nucleosome core particle
分子名称: DNA (131-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Roberts, G.A, Ozkan, B, Gachulincova, I, O Dwyer, M.R, Hall-Ponsele, E, Saxena, M, Robinson, P.J, Soufi, A.
登録日2021-02-19
公開日2021-08-11
最終更新日2021-09-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Dissecting OCT4 defines the role of nucleosome binding in pluripotency.
Nat.Cell Biol., 23, 2021
7COW
DownloadVisualize
BU of 7cow by Molmil
353 bp di-nucleosome harboring cohesive DNA termini with linker histone H1.0
分子名称: CALCIUM ION, CHLORIDE ION, DNA (353-MER), ...
著者Adhireksan, Z, Sharma, D, Lee, P.L, Davey, C.A.
登録日2020-08-05
公開日2021-08-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Engineering nucleosomes for generating diverse chromatin assemblies.
Nucleic Acids Res., 49, 2021
7N8N
DownloadVisualize
BU of 7n8n by Molmil
Melbournevirus nucleosome like particle
分子名称: DNA (147-MER), Histone H2B-H2A doublet, Histone H4-H3 doublet
著者Liu, Y, Toner, C.M, Zhou, K, Bowerman, S, Luger, K.
登録日2021-06-15
公開日2021-08-04
最終更新日2021-08-25
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Virus-encoded histone doublets are essential and form nucleosome-like structures.
Cell, 184, 2021
7AH8
DownloadVisualize
BU of 7ah8 by Molmil
NF-Y bound to suramin inhibitor
分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, CITRATE ANION, GLYCEROL, ...
著者Nardone, V, Chaves-Sanjuan, A, Lapi, M, Nardini, M.
登録日2020-09-24
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.70001364 Å)
主引用文献Structural Basis of Inhibition of the Pioneer Transcription Factor NF-Y by Suramin.
Cells, 9, 2020
7OHA
DownloadVisualize
BU of 7oha by Molmil
nucleosome with TBP and TFIIA bound at SHL +2
分子名称: DNA (122-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-09
公開日2021-07-28
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHC
DownloadVisualize
BU of 7ohc by Molmil
Cryo-EM structure of nucleosome core particle composed of the Widom 601 DNA sequence
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-10
公開日2021-07-28
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OH9
DownloadVisualize
BU of 7oh9 by Molmil
Nucleosome with TBP and TFIIA bound at SHL -6
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-09
公開日2021-07-28
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7OHB
DownloadVisualize
BU of 7ohb by Molmil
TBP-nucleosome complex
分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ...
著者Wang, H, Cramer, P.
登録日2021-05-10
公開日2021-07-28
最終更新日2021-08-04
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures and implications of TBP-nucleosome complexes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LYA
DownloadVisualize
BU of 7lya by Molmil
Cryo-EM structure of the human nucleosome core particle with linked histone proteins H2A and H2B
分子名称: DNA (146-MER), DNA (147-MER), Histone H2A type 1-B/E, ...
著者Hu, Q, Botuyan, M.V, Zhao, D, Cui, D, Mer, E, Mer, G.
登録日2021-03-06
公開日2021-07-28
最終更新日2021-09-01
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation.
Nature, 596, 2021
7LYB
DownloadVisualize
BU of 7lyb by Molmil
Cryo-EM structure of the human nucleosome core particle in complex with BRCA1-BARD1-UbcH5c
分子名称: BRCA1-associated RING domain protein 1, DNA (146-MER), DNA (147-MER), ...
著者Hu, Q, Botuyan, M.V, Zhao, D, Cui, D, Mer, E, Mer, G.
登録日2021-03-06
公開日2021-07-28
最終更新日2021-09-01
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Mechanisms of BRCA1-BARD1 nucleosome recognition and ubiquitylation.
Nature, 596, 2021
7EA8
DownloadVisualize
BU of 7ea8 by Molmil
Human SETD2 bound to a nucleosome containing oncohistone mutations
分子名称: 601-DNA, Histone H2A type 1-D, Histone H2B type 2-E, ...
著者Jing, H, Liu, Y.
登録日2021-03-06
公開日2021-07-14
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of SETD2/Set2 methyltransferase bound to a nucleosome containing oncohistone mutations.
Cell Discov, 7, 2021
7EA5
DownloadVisualize
BU of 7ea5 by Molmil
Yeast Set2 bound to a nucleosome containing oncohistone mutations
分子名称: 601-DNA, Histone H2A, Histone H2B, ...
著者Jing, H, Liu, Y.
登録日2021-03-06
公開日2021-07-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of SETD2/Set2 methyltransferase bound to a nucleosome containing oncohistone mutations.
Cell Discov, 7, 2021
7ENN
DownloadVisualize
BU of 7enn by Molmil
The structure of ALC1 bound to the nucleosome
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1-like, ...
著者Chen, Z.C, Chen, K.J, Wang, L.
登録日2021-04-18
公開日2021-07-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of ALC1/CHD1L autoinhibition and the mechanism of activation by the nucleosome.
Nat Commun, 12, 2021
7NKY
DownloadVisualize
BU of 7nky by Molmil
RNA Polymerase II-Spt4/5-nucleosome-FACT structure
分子名称: Chromatin elongation factor SPT4, DNA (138-MER), DNA (148-MER), ...
著者Farnung, L, Ochmann, M, Engeholm, M, Cramer, P.
登録日2021-02-19
公開日2021-07-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of nucleosome transcription mediated by Chd1 and FACT.
Nat.Struct.Mol.Biol., 28, 2021

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon