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1M3V
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FLIN4: Fusion of the LIM binding domain of Ldb1 and the N-terminal LIM domain of LMO4
分子名称: ZINC ION, fusion of the LIM interacting domain of ldb1 and the N-terminal LIM domain of LMO4
著者Deane, J.E, Mackay, J.P, Kwan, A.H.Y, Sum, E.Y, Visvader, J.E, Matthews, J.M.
登録日2002-06-30
公開日2003-05-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for the recognition of ldb1 by the N-terminal LIM domains of LMO2 and LMO4
EMBO J., 22, 2003
6TYD
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BU of 6tyd by Molmil
Structure of human LDB1 in complex with SSBP2
分子名称: LIM domain-binding protein 1, Single-stranded DNA-binding protein 2
著者Wang, H, Wang, Z, Xu, W.
登録日2019-08-08
公開日2020-01-01
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献Crystal structure of human LDB1 in complex with SSBP2.
Proc.Natl.Acad.Sci.USA, 117, 2020
1RUT
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BU of 1rut by Molmil
Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain
分子名称: Fusion protein of Lmo4 protein and LIM domain-binding protein 1, ZINC ION
著者Deane, J.E, Ryan, D.P, Maher, M.J, Kwan, A.H.Y, Bacca, M, Mackay, J.P, Guss, J.M, Visvader, J.E, Matthews, J.M.
登録日2003-12-11
公開日2004-10-12
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex
Embo J., 23, 2004
1J2O
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BU of 1j2o by Molmil
Structure of FLIN2, a complex containing the N-terminal LIM domain of LMO2 and ldb1-LID
分子名称: Fusion of Rhombotin-2 and LIM domain-binding protein 1, ZINC ION
著者Deane, J.E, Mackay, J.P, Kwan, A.H, Sum, E.Y, Visvader, J.E, Matthews, J.M.
登録日2003-01-08
公開日2003-05-13
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structural basis for the recognition of ldb1 by the N-terminal LIM domains of LMO2 and LMO4
EMBO J., 22, 2003
2LXD
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BU of 2lxd by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for LMO2(LIM2)-Ldb1(LID)
分子名称: Rhombotin-2,LIM domain-binding protein 1, ZINC ION
著者Dastmalchi, S, Wilkinson-White, L, Kwan, A.H, Gamsjaeger, R, Mackay, J.P, Matthews, J.M.
登録日2012-08-20
公開日2012-09-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of a tethered Lmo2(LIM2) /Ldb1(LID) complex.
Protein Sci., 21, 2012
8HIB
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BU of 8hib by Molmil
The crystal structure of Pygo2-LDB1-SSBP2 triple complex
分子名称: LIM domain-binding protein 1, Pygopus homolog 2, Single-stranded DNA-binding protein 2
著者Wang, H.Y, Yan, X.X, Xu, W.Q.
登録日2022-11-19
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The crystal structure of Pygo2-LDB1-SSBP2 triple complex
To Be Published
6PTL
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BU of 6ptl by Molmil
Structure of the self-association domain of the chromatin looping factor LDB1
分子名称: LIM domain-binding protein 1
著者Macindoe, I, Silva, A, Guss, J.M, Mackay, J.P, Matthews, J.M.
登録日2019-07-16
公開日2020-07-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the self-association domain of the chromatin looping factor LDB1
To Be Published
7OB8
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BU of 7ob8 by Molmil
Crystal structure of 14-3-3 sigma in complex with LDB1 phosphopeptide and stabilizer Fusicoccin-A
分子名称: 14-3-3 protein sigma, CHLORIDE ION, FUSICOCCIN, ...
著者Centorrino, F, Andlovic, B, Ottmann, C.
登録日2021-04-21
公開日2022-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献IFN alpha primes cancer cells for Fusicoccin-induced cell death via 14-3-3 PPI stabilization.
Cell Chem Biol, 2023
7OB5
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BU of 7ob5 by Molmil
Crystal structure of 14-3-3 sigma in complex with LDB1 phosphopeptide
分子名称: 14-3-3 protein sigma, CALCIUM ION, CHLORIDE ION, ...
著者Centorrino, F, Andlovic, B, Ottmann, C.
登録日2021-04-21
公開日2022-05-04
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献IFN alpha primes cancer cells for Fusicoccin-induced cell death via 14-3-3 PPI stabilization.
Cell Chem Biol, 2023
2JTN
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BU of 2jtn by Molmil
NMR Solution Structure of a ldb1-LID:Lhx3-LIM complex
分子名称: LIM domain-binding protein 1, LIM/homeobox protein Lhx3, ZINC ION
著者Lee, C, Nancarrow, A.L, Mackay, J.P, Matthews, J.M.
登録日2007-08-03
公開日2008-06-17
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Implementing the LIM code: the structural basis for cell type-specific assembly of LIM-homeodomain complexes
Embo J., 27, 2008
2XJZ
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BU of 2xjz by Molmil
Crystal structure of the LMO2:LDB1-LID complex, C2 crystal form
分子名称: CHLORIDE ION, LIM DOMAIN-BINDING PROTEIN 1, RHOMBOTIN-2, ...
著者El Omari, K, Karia, D, Porcher, C, Mancini, E.J.
登録日2010-07-06
公開日2010-07-21
最終更新日2017-07-12
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Leukemia Oncogene Lmo2: Implications for the Assembly of a Hematopoietic Transcription Factor Complex.
Blood, 117, 2011
2XJY
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BU of 2xjy by Molmil
Crystal structure of the LMO2:LDB1-LID complex, P21 crystal form
分子名称: LIM DOMAIN-BINDING PROTEIN 1, RHOMBOTIN-2, ZINC ION
著者El Omari, K, Karia, D, Porcher, C, Mancini, E.J.
登録日2010-07-06
公開日2010-07-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the Leukemia Oncogene Lmo2: Implications for the Assembly of a Hematopoietic Transcription Factor Complex.
Blood, 117, 2011
2YPA
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BU of 2ypa by Molmil
Structure of the SCL:E47:LMO2:LDB1 complex bound to DNA
分子名称: EBOX FORWARD, EBOX REVERSE, LIM DOMAIN-BINDING PROTEIN 1, ...
著者El Omari, K, Hoosdally, S.J, Tuladhar, K, Karia, D, Ponsele, E, Platonova, O, Vyas, P, Patient, R, Porcher, C, Mancini, E.J.
登録日2012-10-30
公開日2013-07-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis for Lmo2-Driven Recruitment of the Scl:E47bHLH Heterodimer to Hematopoietic-Specific Transcriptional Targets.
Cell Rep., 4, 2013
4JCJ
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BU of 4jcj by Molmil
Crystal structure of Isl1 LIM domains with Ldb1 LIM-interaction domain
分子名称: Insulin gene enhancer protein ISL-1,LIM domain-binding protein 1, ZINC ION
著者Gadd, M.S, Jacques, D.A, Guss, J.M, Matthews, J.M.
登録日2013-02-21
公開日2013-06-19
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A structural basis for the regulation of the LIM-homeodomain protein islet 1 (Isl1) by intra- and intermolecular interactions.
J.Biol.Chem., 288, 2013
2L6Z
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BU of 2l6z by Molmil
haddock model of GATA1NF:Lmo2LIM2-Ldb1LID with FOG
分子名称: Erythroid transcription factor, LIM domain only 2, linker, ...
著者Wilkinson-White, L, Gamsjaeger, R, Dastmalchi, S, Wienert, B, Stokes, P.H, Crossley, M, Mackay, J.P, Matthews, J.M.
登録日2010-12-01
公開日2011-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of simultaneous recruitment of the transcriptional regulators LMO2 and FOG1/ZFPM1 by the transcription factor GATA1
Proc.Natl.Acad.Sci.USA, 108, 2011
2L6Y
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BU of 2l6y by Molmil
haddock model of GATA1NF:Lmo2LIM2-Ldb1LID
分子名称: Erythroid transcription factor, LIM domain only 2, linker, ...
著者Wilkinson-White, L, Gamsjaeger, R, Dastmalchi, S, Wienert, B, Stokes, P.H, Crossley, M, Mackay, J.P, Matthews, J.M.
登録日2010-12-01
公開日2011-08-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis of simultaneous recruitment of the transcriptional regulators LMO2 and FOG1/ZFPM1 by the transcription factor GATA1
Proc.Natl.Acad.Sci.USA, 108, 2011
7OXR
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BU of 7oxr by Molmil
Cryo-EM structure of yeast Sei1 with locking helix deletion
分子名称: BJ4_G0032880.mRNA.1.CDS.1
著者Deme, J.C, Lea, S.M.
登録日2021-06-22
公開日2021-10-13
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex.
Nat Commun, 12, 2021
7OXP
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BU of 7oxp by Molmil
Cryo-EM structure of yeast Sei1
分子名称: BJ4_G0032880.mRNA.1.CDS.1,BJ4_G0032880.mRNA.1.CDS.1
著者Deme, J.C, Lea, S.M.
登録日2021-06-22
公開日2021-10-13
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Mechanism of lipid droplet formation by the yeast Sei1/Ldb16 Seipin complex.
Nat Commun, 12, 2021
6S9T
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BU of 6s9t by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 3
分子名称: Darpin 3, LIM domain-binding protein 1, TETRAETHYLENE GLYCOL
著者Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
登録日2019-07-15
公開日2019-10-09
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S9S
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BU of 6s9s by Molmil
Dimerization domain of Xenopus laevis LDB1 in complex with darpin 10
分子名称: Darpin 10, LIM domain-binding protein 1
著者Renko, M, Schaefer, J.V, Pluckthun, A, Bienz, M.
登録日2019-07-15
公開日2019-10-09
最終更新日2019-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.
Proc.Natl.Acad.Sci.USA, 116, 2019
2DFY
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BU of 2dfy by Molmil
Crystal structure of a cyclized protein fusion of LMO4 LIM domains 1 and 2 with the LIM interacting domain of LDB1
分子名称: GLYCEROL, ZINC ION, fusion protein of LIM domain transcription factor LMO4 and LIM domain-binding protein 1
著者Jeffries, C.M.J, Graham, S.C, Collyer, C.A, Guss, J.M, Matthews, J.M.
登録日2006-03-06
公開日2006-10-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Stabilization of a binary protein complex by intein-mediated cyclization
Protein Sci., 15, 2006
8SSU
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BU of 8ssu by Molmil
ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 19mer DNA
分子名称: 1,2-ETHANEDIOL, DNA (19-MER) Strand I, DNA (19-MER) Strand II, ...
著者Horton, J.R, Yang, J, Cheng, X.
登録日2023-05-08
公開日2023-08-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structures of CTCF-DNA complexes including all 11 zinc fingers.
Nucleic Acids Res., 51, 2023
2YPB
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BU of 2ypb by Molmil
Structure of the SCL:E47 complex bound to DNA
分子名称: EBOX FORWARD, EBOX REVERSE, T-CELL ACUTE LYMPHOCYTIC LEUKEMIA PROTEIN 1, ...
著者El Omari, K, Hoosdally, S.J, Tuladhar, K, Karia, D, Ponsele, E, Platonova, O, Vyas, P, Patient, R, Porcher, C, Mancini, E.J.
登録日2012-10-30
公開日2013-07-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Structural Basis for Lmo2-Driven Recruitment of the Scl:E47bHLH Heterodimer to Hematopoietic-Specific Transcriptional Targets.
Cell Rep., 4, 2013
2RGT
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BU of 2rgt by Molmil
Crystal Structure of Lhx3 LIM domains 1 and 2 with the binding domain of Isl1
分子名称: Fusion of LIM/homeobox protein Lhx3, linker, Insulin gene enhancer protein ISL-1, ...
著者Bhati, M, Lee, M, Guss, J.M, Matthews, J.M.
登録日2007-10-05
公開日2008-08-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Implementing the LIM code: the structural basis for cell type-specific assembly of LIM-homeodomain complexes.
Embo J., 27, 2008
6CME
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BU of 6cme by Molmil
Structure of wild-type ISL2-LID in complex with LHX4-LIM1+2
分子名称: LIM/homeobox protein Lhx4,Insulin gene enhancer protein ISL-2, ZINC ION
著者Stokes, P.H, Silva, A, Guss, J.M, Matthews, J.M.
登録日2018-03-04
公開日2019-04-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Mutation in a flexible linker modulates binding affinity for modular complexes.
Proteins, 87, 2019

 

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