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8GSX
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BU of 8gsx by Molmil
X-ray structure of Clostridium perfringens pili protein B collagen-binding domains
Descriptor: ACETATE ION, pili protein
Authors:Kamitori, S, Yamada, M, Tamai, E.
Deposit date:2022-09-07
Release date:2023-06-07
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural and biochemical characterization of Clostridium perfringens pili protein B collagen-binding domains.
Febs Lett., 597, 2023
8GRV
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BU of 8grv by Molmil
Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)with NAD
Descriptor: ACETATE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative D-lactate dehydrogenase
Authors:Dao, O, Lee, K.H.
Deposit date:2022-09-02
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)
To Be Published
8GRQ
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BU of 8grq by Molmil
Cryo-EM structure of BRCA1/BARD1 bound to H2AK127-UbcH5c-Ub nucleosome
Descriptor: BRCA1-associated RING domain protein 1, Breast cancer type 1 susceptibility protein, DNA (147-MER), ...
Authors:Ai, H.S, Zebin, T, Zhiheng, D, Jiakun, T, Liying, Z, Jia-Bin, L, Man, P, Liu, L.
Deposit date:2022-09-02
Release date:2023-04-12
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination.
Chem, 2023
8GRM
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BU of 8grm by Molmil
Cryo-EM structure of PRC1 bound to H2AK119-UbcH5b-Ub nucleosome
Descriptor: COMMD3 protein, DNA (144-MER), DNA (145-MER), ...
Authors:Ai, H.S, Zebin, T, Zhihend, D, Jiakun, T, Liying, Z, Jia-Bin, L, Man, P, Liu, L.
Deposit date:2022-09-02
Release date:2023-04-12
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Synthetic E2-Ub-nucleosome conjugates for studying nucleosome ubiquitination.
Chem, 2023
8GR9
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BU of 8gr9 by Molmil
Crystal structure of peroxisomal citrate synthase (Cit2) from Saccharomyces cerevisiae in complex with oxaloacetate and coenzyme-A
Descriptor: CHLORIDE ION, COENZYME A, Citrate synthase, ...
Authors:Nishio, K, Nakatsukasa, K, Kamura, T, Mizushima, T.
Deposit date:2022-09-01
Release date:2023-04-26
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Defective import of mitochondrial metabolic enzyme elicits ectopic metabolic stress.
Sci Adv, 9, 2023
8GQZ
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BU of 8gqz by Molmil
Crystal structure of mitochondrial citrate synthase (Cit1) from Saccharomyces cerevisiae
Descriptor: ACETATE ION, CHLORIDE ION, Citrate synthase, ...
Authors:Nishio, K, Nakatsukasa, K, Kamura, T, Mizushima, T.
Deposit date:2022-08-31
Release date:2023-04-26
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Defective import of mitochondrial metabolic enzyme elicits ectopic metabolic stress.
Sci Adv, 9, 2023
8GQ4
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BU of 8gq4 by Molmil
Histone acetyltransferase Rtt109 mutant-N195A
Descriptor: Histone acetyltransferase RTT109
Authors:Chen, Y.J, Su, D.
Deposit date:2022-08-28
Release date:2023-09-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure of Histone acetyltransferase Rtt109 mutant-N195A
To Be Published
8GQ3
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BU of 8gq3 by Molmil
RTT109 mutant from Candida albicans
Descriptor: Histone acetyltransferase RTT109
Authors:Chen, Y.J, Su, D.
Deposit date:2022-08-28
Release date:2023-09-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.767 Å)
Cite:Crystal structure of RTT109 mutant-Y183A from Candida albicans
To Be Published
8GPN
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BU of 8gpn by Molmil
Human menin in complex with H3K79Me2 nucleosome
Descriptor: DNA (177-MER), Histone H2A type 1, Histone H2B 1.1, ...
Authors:Lin, J, Yu, D, Lam, W.H, Dang, S, Zhai, Y, Li, X.D.
Deposit date:2022-08-26
Release date:2023-02-15
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Menin "reads" H3K79me2 mark in a nucleosomal context.
Science, 379, 2023
8GLV
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BU of 8glv by Molmil
96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella
Descriptor: 28 kDa inner dynein arm light chain, axonemal, AAA+ ATPase domain-containing protein, ...
Authors:Walton, T, Brown, A.
Deposit date:2023-03-23
Release date:2023-05-31
Last modified:2023-06-28
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
8GLD
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BU of 8gld by Molmil
Crystal structure of the peptidoglycan O-acetylesterase Ape1 (amino acids 22-392) from Campylobacter jejuni
Descriptor: ACETATE ION, SGNH hydrolase-type esterase domain-containing protein
Authors:Lin, C.S, Murphy, M.E.
Deposit date:2023-03-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism of the CBM35 domain in assisting catalysis by Ape1, a Campylobacter jejuni O-acetyl esterase
To be published
8GL4
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BU of 8gl4 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-AIB-ALA-CYS-LEU-CYS-GLN-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-20
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.76 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GL0
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BU of 8gl0 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-AIB-ALA-CYS-LEU-CYS-GLN-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-20
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GKD
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BU of 8gkd by Molmil
Crystal structure of the peptidoglycan O-acetylesterase Ape1 (amino acids 41-392) from Campylobacter jejuni
Descriptor: ACETATE ION, SGNH hydrolase-type esterase domain-containing protein
Authors:Lin, C.S, Murphy, M.E.
Deposit date:2023-03-17
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of the CBM35 domain in assisting catalysis by Ape1, a Campylobacter jejuni O-acetyl esterase
To be published
8GK9
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BU of 8gk9 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-AIB-ALA-AIB-LEU-CYS-GLN-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-17
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GK1
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BU of 8gk1 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-AIB-ALA-AIB-LEU-AIB-GLN-AIB-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-16
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GJB
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BU of 8gjb by Molmil
L-threonine 3-Dehydrogenase from Trypanosoma cruzi in complex with NAD and acetate
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
Authors:Mercaldi, G.F, Faria, J.N, Fagundes, M, Bezerra, E.H.S, Cordeiro, A.T.
Deposit date:2023-03-15
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure, allosteric regulation and metabolic activity of L-threonine 3-Dehydrogenase from Trypanosoma cruzi
To Be Published
8GE0
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BU of 8ge0 by Molmil
Crystal structure of JADE1 PZP domain in complex with Histone H3
Descriptor: Histone H3.1,Protein Jade-1, ZINC ION
Authors:Klein, B.J, Liu, J, Kutateladze, T.G.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Guiding the HBO1 complex function through the JADE subunit.
Nat.Struct.Mol.Biol., 2024
8GDX
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BU of 8gdx by Molmil
Crystal structure of JADE1 PZP domain
Descriptor: GLYCEROL, Protein Jade-1, ZINC ION
Authors:Klein, B.J, Liu, J, Kutateladze, T.G.
Deposit date:2023-03-06
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Guiding the HBO1 complex function through the JADE subunit.
Nat.Struct.Mol.Biol., 2024
8GBV
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BU of 8gbv by Molmil
Crystal structure of PC39-17A, an anti-HIV broadly neutralizing antibody
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, PC39-17A Fab heavy chain, ...
Authors:Murrell, S, Omorodion, O, Wilson, I.A.
Deposit date:2023-02-28
Release date:2023-06-07
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Antigen pressure from two founder viruses induces multiple insertions at a single antibody position to generate broadly neutralizing HIV antibodies.
Plos Pathog., 19, 2023
8GBM
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BU of 8gbm by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETATE ION, LEAD (II) ION, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-26
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GBI
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BU of 8gbi by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, LEU-(AIB)-ALA-CYS-LEU-CYS-CYS-(AIB)-LEU, ...
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-02-26
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
8GAR
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BU of 8gar by Molmil
Nitrosomonas europaea Cytochrome P460 Arg44Ala
Descriptor: ACETATE ION, Cytochrome P460, HEME C
Authors:Bollmeyer, M.M, Lancaster, K.M.
Deposit date:2023-02-23
Release date:2023-07-05
Last modified:2023-07-12
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Cytochrome P460 Cofactor Maturation Proceeds via Peroxide-Dependent Post-translational Modification.
J.Am.Chem.Soc., 145, 2023
8G9A
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BU of 8g9a by Molmil
Crystal structure of a resurrected ancestor (AncRNase) of the pancreatic-type RNases 2 and 3 sub-families
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, SULFATE ION, ...
Authors:Tran, T.T.Q, Pham, N.T.H, Calmettes, C, Doucet, N.
Deposit date:2023-02-21
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of a resurrected ancestor (AncRNase) of the pancreatic-type RNases 2 and 3 sub-families
To Be Published
8G8G
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BU of 8g8g by Molmil
Interaction of H3 tail in LIN28B nucleosome with Oct4
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M.
Deposit date:2023-02-17
Release date:2023-03-22
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Histone modifications regulate pioneer transcription factor cooperativity.
Nature, 619, 2023

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PDB entries from 2024-05-15

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