Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GV7
DownloadVisualize
BU of 5gv7 by Molmil
Structure of NADH-cytochrome b5 reductase refined with the multipolar atomic model at 0.80 A
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADH-cytochrome b5 reductase 3
Authors:Takaba, K, Takeda, K, Miki, K.
Deposit date:2016-09-03
Release date:2017-04-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Distribution of valence electrons of the flavin cofactor in NADH-cytochrome b5 reductase.
Sci Rep, 7, 2017
4G13
DownloadVisualize
BU of 4g13 by Molmil
Crystal structure of samarosporin I at 100K
Descriptor: SAMAROSPORIN I
Authors:Gessmann, R, Axford, D, Petratos, K.
Deposit date:2012-07-10
Release date:2012-10-03
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:The crystal structure of samarosporin I at atomic resolution.
J.Pept.Sci., 18, 2012
1IUA
DownloadVisualize
BU of 1iua by Molmil
Ultra-high resolution structure of HiPIP from Thermochromatium tepidum
Descriptor: High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Liu, L, Nogi, T, Kobayashi, M, Nozawa, T, Miki, K.
Deposit date:2002-03-01
Release date:2002-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Ultrahigh-resolution structure of high-potential iron-sulfur protein from Thermochromatium tepidum.
Acta Crystallogr.,Sect.D, 58, 2002
1PQ7
DownloadVisualize
BU of 1pq7 by Molmil
Trypsin at 0.8 A, pH5 / borax
Descriptor: ARGININE, SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
2YGI
DownloadVisualize
BU of 2ygi by Molmil
Methanobactin HM1
Descriptor: COPPER (II) ION, METHANOBACTIN HM1
Authors:Ghazouani, A, Basle, A, Firbank, S.J, Gray, J, Dennison, C.
Deposit date:2011-04-18
Release date:2012-04-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Variations in Methanobactin Structure Influences Copper Utilization by Methane-Oxidizing Bacteria.
Proc.Natl.Acad.Sci.USA, 109, 2012
2YGJ
DownloadVisualize
BU of 2ygj by Molmil
Methanobactin MB4
Descriptor: COPPER (II) ION, METHANOBACTIN MB4, SODIUM ION
Authors:Ghazouani, A, Basle, A, Firbank, S.J, Gray, J, Dennison, C.
Deposit date:2011-04-18
Release date:2012-04-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Variations in Methanobactin Structure Influences Copper Utilization by Methane-Oxidizing Bacteria.
Proc.Natl.Acad.Sci.USA, 109, 2012
5OQZ
DownloadVisualize
BU of 5oqz by Molmil
Crystal structure of the lasso peptide rubrivinodin
Descriptor: Rubrivinodin
Authors:Fage, C.D, Hegemann, J.D, Marahiel, M.A.
Deposit date:2017-08-14
Release date:2018-02-07
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (0.806 Å)
Cite:General rules of fragmentation evidencing lasso structures in CID and ETD.
Analyst, 143, 2018
8GKX
DownloadVisualize
BU of 8gkx by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
Descriptor: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEU-AIB-ALA-AIB-LEU-HIS-GLN-AIB-LEU, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate
Authors:Hess, S.S, Nguyen, A.I.
Deposit date:2023-03-20
Release date:2023-11-15
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
1FN8
DownloadVisualize
BU of 1fn8 by Molmil
FUSARIUM OXYSPORUM TRYPSIN AT ATOMIC RESOLUTION
Descriptor: GLY-ALA-ARG, GLYCEROL, SULFATE ION, ...
Authors:Rypniewski, W.R, Oestergaard, P, Noerregaard-Madsen, M, Dauter, M, Wilson, K.S.
Deposit date:2000-08-21
Release date:2001-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Fusarium oxysporum trypsin at atomic resolution at 100 and 283 K: a study of ligand binding.
Acta Crystallogr.,Sect.D, 57, 2001
4M7G
DownloadVisualize
BU of 4m7g by Molmil
Streptomyces Erythraeus Trypsin
Descriptor: Trypsin-like protease
Authors:Blankenship, E, Vukoti, K, Miyagi, M, Lodowski, D.T.
Deposit date:2013-08-12
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Conformational flexibility in the catalytic triad revealed by the high-resolution crystal structure of Streptomyces erythraeus trypsin in an unliganded state.
Acta Crystallogr.,Sect.D, 70, 2014
6SYJ
DownloadVisualize
BU of 6syj by Molmil
Crystal structure of a ProM2 containing triple-helical collagen peptide.
Descriptor: ProM2 containing collagen model peptide.
Authors:Gebauer, J.M, Maassen, A, Schmalz, H.-G, Baumann, U.
Deposit date:2019-09-30
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Triple-Helix-Stabilizing Effects in Collagen Model Peptides Containing PPII-Helix-Preorganized Diproline Modules.
Angew.Chem.Int.Ed.Engl., 59, 2020
7WKB
DownloadVisualize
BU of 7wkb by Molmil
The 0.81 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with docosahexaenoic acid
Descriptor: DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2022-01-08
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:The 0.81 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with docosahexaenoic acid
To Be Published
1GDN
DownloadVisualize
BU of 1gdn by Molmil
FUSARIUM OXYSPORUM TRYPSIN AT ATOMIC RESOLUTION
Descriptor: GLY-ALA-LYS, GLYCEROL, SULFATE ION, ...
Authors:Rypniewski, W.R, Oestergaard, P, Noerregaard-Madsen, M, Dauter, M, Wilson, K.S.
Deposit date:2000-09-28
Release date:2001-02-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Fusarium oxysporum trypsin at atomic resolution at 100 and 283 K: a study of ligand binding.
Acta Crystallogr.,Sect.D, 57, 2001
1FY5
DownloadVisualize
BU of 1fy5 by Molmil
Fusarium oxysporum trypsin at atomic resolution
Descriptor: GLY-ALA-LYS, GLYCEROL, SULFATE ION, ...
Authors:Rypniewski, W.R, Oestergaard, P, Noerregaard-Madsen, M, Dauter, M, Wilson, K.S.
Deposit date:2000-09-28
Release date:2001-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Fusarium oxysporum trypsin at atomic resolution at 100 and 283 K: a study of ligand binding.
Acta Crystallogr.,Sect.D, 57, 2001
4NAG
DownloadVisualize
BU of 4nag by Molmil
Xanthomonins I III are a New Class of Lasso Peptides Featuringa Seven-Membered Macrolactam Ring
Descriptor: HEXANE-1,6-DIOL, Xanthomonin I
Authors:Hegemann, J.D, Zimmermann, M, Zhu, S, Steuber, H, Harms, K, Xie, X, Marahiel, M.A.
Deposit date:2013-10-22
Release date:2014-04-30
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Xanthomonins I-III: A New Class of Lasso Peptides with a Seven-Residue Macrolactam Ring.
Angew.Chem.Int.Ed.Engl., 53, 2014
1FY4
DownloadVisualize
BU of 1fy4 by Molmil
FUSARIUM OXYSPORUM TRYPSIN AT ATOMIC RESOLUTION
Descriptor: GLY-ALA-ARG, GLYCEROL, SULFATE ION, ...
Authors:Rypniewski, W.R, Oestergaard, P, Noerregaard-Madsen, M, Dauter, M, Wilson, K.S.
Deposit date:2000-09-28
Release date:2001-02-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Fusarium oxysporum trypsin at atomic resolution at 100 and 283 K: a study of ligand binding.
Acta Crystallogr.,Sect.D, 57, 2001
2I17
DownloadVisualize
BU of 2i17 by Molmil
Human aldose reductase in complex with NADP+ and the inhibitor IDD594 at temperature of 60K
Descriptor: Aldose reductase, CITRIC ACID, IDD594, ...
Authors:Petrova, T, Ginell, S, Mitshler, A, Hasemann, I, Schneider, T, Cousido, A, Lunin, V.Y, Joachimiak, A, Podjarny, A.
Deposit date:2006-08-13
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Ultrahigh-resolution study of protein atomic displacement parameters at cryotemperatures obtained with a helium cryostat.
Acta Crystallogr.,Sect.D, 62, 2006
2I16
DownloadVisualize
BU of 2i16 by Molmil
Human aldose reductase in complex with NADP+ and the inhibitor IDD594 at temperature of 15K
Descriptor: Aldose reductase, CITRIC ACID, IDD594, ...
Authors:Petrova, T, Ginell, S, Mitshler, A, Hasemann, I, Schneider, T, Cousido, A, Lunin, V.Y, Joachimiak, A, Podjarny, A.
Deposit date:2006-08-13
Release date:2006-08-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Ultrahigh-resolution study of protein atomic displacement parameters at cryotemperatures obtained with a helium cryostat.
Acta Crystallogr.,Sect.D, 62, 2006
5I6A
DownloadVisualize
BU of 5i6a by Molmil
bicyclo[3.3.2]decapeptide
Descriptor: ALA-PHE-GLY-LYD-VAL-PHE-PRO-GLN-ALA-GLY, DIMETHYL SULFOXIDE
Authors:Bartoloni, M, Waltersperger, S, Bumann, M, Stocker, A, Darbre, T, Reymond, J.-L.
Deposit date:2016-02-16
Release date:2016-03-09
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (0.813 Å)
Cite:Stereoselective synthesis and structure determination of a bicyclo[3.3.2]decapeptide
Arkivoc, 2014, 2014
5HB7
DownloadVisualize
BU of 5hb7 by Molmil
Crystal structure of Chaetomium thermophilum Nup53 RRM
Descriptor: IODIDE ION, Nucleoporin NUP53
Authors:Lin, D.H, Stuwe, T, Hoelz, A.
Deposit date:2015-12-31
Release date:2016-04-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (0.819 Å)
Cite:Architecture of the symmetric core of the nuclear pore.
Science, 352, 2016
8C3X
DownloadVisualize
BU of 8c3x by Molmil
Crystal structure of Paradendryphiella salina PL7C alginate lyase
Descriptor: 1,2-ETHANEDIOL, Alginate lyase
Authors:Fredslund, F, Welner, D.W, Wilkens, C.
Deposit date:2022-12-29
Release date:2023-02-08
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:Crystal structure of Paradendryphiella salina PL7C alginate lyase
To Be Published
2J8T
DownloadVisualize
BU of 2j8t by Molmil
Human aldose reductase in complex with NADP and citrate at 0.82 angstrom
Descriptor: ALDO-KETO REDUCTASE FAMILY 1, MEMBER B1, CITRATE ANION, ...
Authors:Biadene, M, Hazemann, I, Cousido, A, Ginell, S, Sheldrick, G.M, Podjarny, A, Schneider, T.R.
Deposit date:2006-10-27
Release date:2007-05-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:The Atomic Resolution Structure of Human Aldose Reductase Reveals that Rearrangement of a Bound Ligand Allows the Opening of the Safety-Belt Loop.
Acta Crystallogr.,Sect.D, 63, 2007
7AVK
DownloadVisualize
BU of 7avk by Molmil
Streptococcal High Identity Repeats in Tandem (SHIRT) domain 10 from cell surface protein SGO_0707
Descriptor: LPXTG cell wall surface protein, isothiocyanate
Authors:Degut, C, Gilburt, J, Whelan, F, Jenkins, H.T, Potts, J.R.
Deposit date:2020-11-05
Release date:2021-06-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:Periscope Proteins are variable-length regulators of bacterial cell surface interactions.
Proc.Natl.Acad.Sci.USA, 118, 2021
2VXN
DownloadVisualize
BU of 2vxn by Molmil
E65Q-TIM complexed with phosphoglycolohydroxamate at 0.82 A resolution
Descriptor: 2-PHOSPHOGLYCOLIC ACID, ACETATE ION, GLYCEROL, ...
Authors:Alahuhta, M, Wierenga, R.K.
Deposit date:2008-07-08
Release date:2009-07-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:Atomic Resolution Crystallography of a Complex of Triosephosphate Isomerase with a Reaction-Intermediate Analog: New Insight in the Proton Transfer Reaction Mechanism
Proteins, 78, 2010
2H5C
DownloadVisualize
BU of 2h5c by Molmil
0.82A resolution crystal structure of alpha-lytic protease at pH 5
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Fuhrmann, C.N, Daugherty, M.D, Agard, D.A.
Deposit date:2006-05-25
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:Subangstrom crystallography reveals that short ionic hydrogen bonds, and not a His-Asp low-barrier hydrogen bond, stabilize the transition state in serine protease catalysis
J.Am.Chem.Soc., 128, 2006

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon