PDB: 499 resultsInfo pagesStatus searchChemie searchBIRD

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6B48	Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10 Descriptor: Anti-CRISPR protein AcrF10, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ... Authors: Guo, T.W, Bartesaghi, A, Yang, H, Falconieri, V, Rao, P, Merk, A, Fox, T, Earl, L, Patel, D.J, Subramaniam, S. Deposit date: 2017-09-25 Release date: 2017-10-18 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex. Cell, 171, 2017
6C3R	Cricket paralysis virus RNAi suppressor protein CrPV-1A Descriptor: Cricket paralysis virus 1A protein Authors: Nayak, A, Kim, D.Y, Andino, R, Gross, J. Deposit date: 2018-01-10 Release date: 2018-10-17 Last modified: 2019-12-18 Method: X-RAY DIFFRACTION (2.6 Å) Cite: A Viral Protein Restricts Drosophila RNAi Immunity by Regulating Argonaute Activity and Stability. Cell Host Microbe, 24, 2018
2Y35	Crystal structure of Xrn1-substrate complex Descriptor: DT11 (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP)-3', LD22664P, MAGNESIUM ION Authors: Jinek, M, Coyle, S.M, Doudna, J.A. Deposit date: 2010-12-18 Release date: 2011-03-16 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Coupled 5' Nucleotide Recognition and Processivity in Xrn1-Mediated Mrna Decay. Mol.Cell, 41, 2011
2XFM	Complex structure of the MIWI Paz domain bound to methylated single stranded RNA Descriptor: 5'-R(*AP*CP*CP*GP*AP*CP*UP*(OMU)P)-3', PIWI-LIKE PROTEIN 1 Authors: Simon, B, Kirkpatrick, J.P, Eckhardt, S, Sehr, P, Andrade-Navarro, M.A, Pillai, R.S, Carlomagno, T. Deposit date: 2010-05-27 Release date: 2011-01-26 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Recognition of 2'-O-Methylated 3'-End of Pirna by the Paz Domain of a Piwi Protein. Structure, 19, 2011
4ZT9	Nuclease-inactive Streptococcus pyogenes Cas9 (D10A/H840A, dCas9) in complex with single-guide RNA at 3.1 Angstrom resolution Descriptor: CRISPR-associated endonuclease Cas9, single-guide RNA Authors: Jiang, F, Doudna, J.A. Deposit date: 2015-05-14 Release date: 2015-07-08 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.1 Å) Cite: A Cas9-guide RNA complex preorganized for target DNA recognition. Science, 348, 2015
4ZT0	Crystal structure of catalytically-active Streptococcus pyogenes Cas9 in complex with single-guide RNA at 2.9 Angstrom resolution Descriptor: CRISPR-associated endonuclease Cas9, single-guide RNA Authors: Jiang, F, Doudna, J.A. Deposit date: 2015-05-14 Release date: 2015-07-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: A Cas9-guide RNA complex preorganized for target DNA recognition. Science, 348, 2015
6LFZ	Crystal structure of SbCGTb in complex with UDPG Descriptor: SbCGTb, URIDINE-5'-DIPHOSPHATE-GLUCOSE Authors: Gao, H.M, Yun, C.H. Deposit date: 2019-12-04 Release date: 2020-11-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.866 Å) Cite: Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants. Proc.Natl.Acad.Sci.USA, 117, 2020
6LF6	Crystal structure of ZmCGTa in complex with UDP Descriptor: UDP-glycosyltransferase 708A6, URIDINE-5'-DIPHOSPHATE Authors: Gao, H.M, Yun, C.H. Deposit date: 2019-11-29 Release date: 2020-11-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.044 Å) Cite: Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants. Proc.Natl.Acad.Sci.USA, 117, 2020
6LG1	Crystal structure of LpCGTa in complex with UDP Descriptor: LpCGTa, URIDINE-5'-DIPHOSPHATE Authors: Gao, H.M, Yun, C.H. Deposit date: 2019-12-04 Release date: 2020-11-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.047 Å) Cite: Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants. Proc.Natl.Acad.Sci.USA, 117, 2020
6LG0	Crystal structure of SbCGTa in complex with UDP Descriptor: SbCGTa, URIDINE-5'-DIPHOSPHATE Authors: Gao, H.M, Yun, C.H. Deposit date: 2019-12-04 Release date: 2020-11-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.998 Å) Cite: Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants. Proc.Natl.Acad.Sci.USA, 117, 2020
6LFN	Crystal structure of LpCGTb Descriptor: LpCGTb, PHOSPHATE ION Authors: Gao, H.M, Yun, C.H. Deposit date: 2019-12-03 Release date: 2020-11-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.395 Å) Cite: Dissection of the general two-step di- C -glycosylation pathway for the biosynthesis of (iso)schaftosides in higher plants. Proc.Natl.Acad.Sci.USA, 117, 2020
3WTD	Structure of PAXX Descriptor: Uncharacterized protein C9orf142 Authors: Ochi, T, Blundell, T.L. Deposit date: 2014-04-09 Release date: 2015-01-21 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.35 Å) Cite: DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair. Science, 347, 2015
3WTF	Structure of PAXX Descriptor: Uncharacterized protein C9orf142 Authors: Ochi, T, Blundell, T.L. Deposit date: 2014-04-09 Release date: 2015-01-21 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.451 Å) Cite: DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair. Science, 347, 2015
6O1O	Cryo-EM structure of the T. thermophilus Csm complex bound to target ssRNA Descriptor: Csm1, Csm2, Csm3, ... Authors: Liu, J.J, Liu, T.Y. Deposit date: 2019-02-21 Release date: 2019-07-10 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Target preference of Type III-A CRISPR-Cas complexes at the transcription bubble. Nat Commun, 10, 2019
3BBF	Crystal structure of the NM23-H2 transcription factor complex with GDP Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Weichsel, A, Montfort, W.R. Deposit date: 2007-11-09 Release date: 2008-09-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1. Mol.Cancer Ther., 8, 2009
3BBB	Crystal structure of the NM23-H2 transcription factor complex with dinucleotide d(AG) Descriptor: DNA (5'-D(*AP*G)-3'), Nucleoside diphosphate kinase B Authors: Weichsel, A, Montfort, W.R. Deposit date: 2007-11-09 Release date: 2008-09-23 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.3 Å) Cite: NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1. Mol.Cancer Ther., 8, 2009
3BBC	Crystal structure of R88A mutant of the NM23-H2 transcription factor Descriptor: Nucleoside diphosphate kinase B Authors: Weichsel, A, Montfort, W.R. Deposit date: 2007-11-09 Release date: 2008-09-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1. Mol.Cancer Ther., 8, 2009
2GUT	Solution structure of the trans-activation domain of the human co-activator ARC105 Descriptor: ARC/MEDIATOR, Positive cofactor 2 glutamine/Q-rich-associated protein Authors: Vought, B.W, Jim Sun, Z.-Y, Hyberts, S.G, Wagner, G, Naar, A.M. Deposit date: 2006-05-01 Release date: 2006-08-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: An ARC/Mediator subunit required for SREBP control of cholesterol and lipid homeostasis. Nature, 442, 2006
2HNS	Structure of the AAGU tetraloop Descriptor: 5'-R(*GP*GP*CP*GP*UP*GP*AP*UP*CP*AP*AP*GP*UP*GP*AP*UP*CP*GP*CP*GP*CP*C)-3' Authors: Gaudin, C, Fourmy, F, Yoshizawa, S. Deposit date: 2006-07-13 Release date: 2006-10-31 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Structure of an AAGU Tetraloop and its Contribution to Substrate Selection by yeast RNase III. J.Mol.Biol., 363, 2006
1W22	Crystal structure of inhibited human HDAC8 Descriptor: HISTONE DEACETYLASE 8, N-HYDROXY-4-(METHYL{[5-(2-PYRIDINYL)-2-THIENYL]SULFONYL}AMINO)BENZAMIDE, POTASSIUM ION, ... Authors: Vannini, A, Volpari, C, Caroli Casavola, E, Di Marco, S. Deposit date: 2004-06-25 Release date: 2004-09-24 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure of a Eukaryotic Zn-Dependent Histone Deacetylase,Human Hdac8,Complexed with a Hydroxamic Acid Inhibitor Proc.Natl.Acad.Sci.USA, 101, 2004
1W3B	The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. Descriptor: CALCIUM ION, UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 Authors: Jinek, M, Rehwinkel, J, Lazarus, B.D, Izaurralde, E, Hanover, J.A, Conti, E. Deposit date: 2004-07-14 Release date: 2004-09-09 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.85 Å) Cite: The Superhelical Tpr-Repeat Domain of O-Linked Glcnac Transferase Exhibits Structural Similarities to Importin Alpha Nat.Struct.Mol.Biol., 11, 2004
5O8M	Crystal structure of the MmI1 YTH domain Descriptor: GLYCEROL, YTH domain-containing protein mmi1 Authors: Brettschneider, J, Verdel, A, Kadlec, J. Deposit date: 2017-06-13 Release date: 2018-04-25 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation. EMBO J., 36, 2017
3FQI	Crystal Structure of the Mouse Dom3Z Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, Protein Dom3Z Authors: Xiang, S, Tong, L. Deposit date: 2009-01-07 Release date: 2009-02-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.013 Å) Cite: Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature, 458, 2009
3FQG	Crystal Structure of the S. pombe Rai1 Descriptor: MAGNESIUM ION, Protein din1 Authors: Xiang, S, Tong, L. Deposit date: 2009-01-07 Release date: 2009-02-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature, 458, 2009
3FQJ	Crystal Structure of the Mouse Dom3Z in Complex with GDP Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein Dom3Z Authors: Xiang, S, Tong, L. Deposit date: 2009-01-07 Release date: 2009-02-03 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.623 Å) Cite: Structure and function of the 5'-->3' exoribonuclease Rat1 and its activating partner Rai1. Nature, 458, 2009

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