Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ZL3
DownloadVisualize
BU of 1zl3 by Molmil
Coupling of active site motions and RNA binding
Descriptor: 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3', SULFATE ION, tRNA pseudouridine synthase B
Authors:Hoang, C, Hamilton, C.S, Mueller, E.G, Ferre-D'Amare, A.R.
Deposit date:2005-05-05
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Precursor complex structure of pseudouridine synthase TruB suggests coupling of active site perturbations to an RNA-sequestering peripheral protein domain
Protein Sci., 14, 2005
1ZG7
DownloadVisualize
BU of 1zg7 by Molmil
Crystal Structure of 2-(5-{[amino(imino)methyl]amino}-2-chlorophenyl)-3-sulfanylpropanoic acid Bound to Activated Porcine Pancreatic Carboxypeptidase B
Descriptor: 2-(5-{[AMINO(IMINO)METHYL]AMINO}-2-CHLOROPHENYL)-3-SULFANYLPROPANOIC ACID, ZINC ION, procarboxypeptidase B
Authors:Adler, M, Bryant, J, Buckman, B, Islam, I, Larsen, B, Finster, S, Kent, L, May, K, Mohan, R, Yuan, S, Whitlow, M.
Deposit date:2005-04-20
Release date:2005-07-12
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase b.
Biochemistry, 44, 2005
1JKL
DownloadVisualize
BU of 1jkl by Molmil
1.6A X-RAY STRUCTURE OF BINARY COMPLEX OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE WITH ATP ANALOGUE
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Tereshko, V, Teplova, M, Brunzelle, J, Watterson, D.M, Egli, M.
Deposit date:2001-07-12
Release date:2002-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression.
Nat.Struct.Biol., 8, 2001
1JKS
DownloadVisualize
BU of 1jks by Molmil
1.5A X-RAY STRUCTURE OF APO FORM OF A CATALYTIC DOMAIN OF DEATH-ASSOCIATED PROTEIN KINASE
Descriptor: DEATH-ASSOCIATED PROTEIN KINASE
Authors:Tereshko, V, Teplova, M, Brunzelle, J, Watterson, D.M, Egli, M.
Deposit date:2001-07-13
Release date:2002-04-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of the catalytic domain of human protein kinase associated with apoptosis and tumor suppression.
Nat.Struct.Biol., 8, 2001
1CH8
DownloadVisualize
BU of 1ch8 by Molmil
STRUCTURE OF ADENYLOSUCCINATE SYNTHETASE FROM E. COLI COMPLEXED WITH A STRINGENT EFFECTOR, PPG2':3'P
Descriptor: GUANOSINE 5'-DIPHOSPHATE 2':3'-CYCLIC MONOPHOSPHATE, HADACIDIN, INOSINIC ACID, ...
Authors:Hou, Z, Cashel, M, Fromm, H.J, Honzatko, R.B.
Deposit date:1999-03-31
Release date:1999-12-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Effectors of the stringent response target the active site of Escherichia coli adenylosuccinate synthetase.
J.Biol.Chem., 274, 1999
1ZNS
DownloadVisualize
BU of 1zns by Molmil
Crystal structure of N-ColE7/12-bp DNA/Zn complex
Descriptor: 5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3', Colicin E7, ZINC ION
Authors:Doudeva, L.G, Huang, H, Hsia, K.C, Shi, Z, Li, C.L, Shen, Y, Yuan, H.S.
Deposit date:2005-05-12
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+
Protein Sci., 15, 2006
1JLM
DownloadVisualize
BU of 1jlm by Molmil
I-DOMAIN FROM INTEGRIN CR3, MN2+ BOUND
Descriptor: INTEGRIN, MANGANESE (II) ION
Authors:Lee, J.-O, Liddington, R.
Deposit date:1996-04-09
Release date:1997-01-11
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Two conformations of the integrin A-domain (I-domain): a pathway for activation?
Structure, 3, 1995
1ZHP
DownloadVisualize
BU of 1zhp by Molmil
Crystal Structure of the Catalytic Domain of Coagulation Factor XI in Complex with Benzamidine (S434A-T475A-K505 Mutant)
Descriptor: BENZAMIDINE, GLUTATHIONE, coagulation factor XI
Authors:Jin, L, Pandey, P, Babine, R.E, Weaver, D.T, Abdel-Meguid, S.S, Strickler, J.E.
Deposit date:2005-04-26
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mutation of surface residues to promote crystallization of activated factor XI as a complex with benzamidine: an essential step for the iterative structure-based design of factor XI inhibitors.
Acta Crystallogr.,Sect.D, 61, 2005
1JLQ
DownloadVisualize
BU of 1jlq by Molmil
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH 739W94
Descriptor: 2-AMINO-6-(3,5-DIMETHYLPHENYL)SULFONYLBENZONITRILE, HIV-1 RT, A-CHAIN, ...
Authors:Ren, J, Stuart, D.I, Stammers, D.K.
Deposit date:2001-07-16
Release date:2001-08-22
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:2-Amino-6-arylsulfonylbenzonitriles as non-nucleoside reverse transcriptase inhibitors of HIV-1.
J.Med.Chem., 44, 2001
1ZHZ
DownloadVisualize
BU of 1zhz by Molmil
Structure of yeast oxysterol binding protein Osh4 in complex with ergosterol
Descriptor: ERGOSTEROL, KES1 protein, LEAD (II) ION
Authors:Im, Y.J, Raychaudhuri, S, Prinz, W.A, Hurley, J.H.
Deposit date:2005-04-26
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural mechanism for sterol sensing and transport by OSBP-related proteins
Nature, 437, 2005
1ZP4
DownloadVisualize
BU of 1zp4 by Molmil
Glu28Gln mutant of E. coli Methylenetetrahydrofolate Reductase (oxidized) complex with Methyltetrahydrofolate
Descriptor: 5,10-methylenetetrahydrofolate reductase, 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pejchal, R, Sargeant, R, Ludwig, M.L.
Deposit date:2005-05-16
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of NADH and CH(3)-H(4)Folate Complexes of Escherichia coli Methylenetetrahydrofolate Reductase Reveal a Spartan Strategy for a Ping-Pong Reaction
Biochemistry, 44, 2005
1JO2
DownloadVisualize
BU of 1jo2 by Molmil
Crystal Structure of the B-DNA Hexamer (CgATCG).Daunomycin Complex Containing a Ribose at the Intercalation Site
Descriptor: 5'-D(*C)-R(P*G)-D(P*AP*TP*CP*G)-3', DAUNOMYCIN
Authors:Shi, K, Pan, B, Sundaralingam, M.
Deposit date:2001-07-26
Release date:2003-07-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a B-form DNA/RNA chimera (dC)(rG)d(ATCG) complexed with daunomycin at 1.5 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
1JE5
DownloadVisualize
BU of 1je5 by Molmil
Crystal Structure of gp2.5, a Single-Stranded DNA Binding Protein Encoded by Bacteriophage T7
Descriptor: CALCIUM ION, HELIX-DESTABILIZING PROTEIN
Authors:Hollis, T, Stattel, J.M, Walther, D.S, Richardson, C.C, Ellenberger, T.E.
Deposit date:2001-06-15
Release date:2001-08-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7.
Proc.Natl.Acad.Sci.USA, 98, 2001
1JOT
DownloadVisualize
BU of 1jot by Molmil
STRUCTURE OF THE LECTIN MPA COMPLEXED WITH T-ANTIGEN DISACCHARIDE
Descriptor: AGGLUTININ, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Lee, X, Thompson, A, Zhang, Z, Hoa, T.-T, Biesterfeldt, J, Ogata, C, Xu, L, Johnston, R.A.Z, Young, N.M.
Deposit date:1997-12-05
Release date:1998-12-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the complex of Maclura pomifera agglutinin and the T-antigen disaccharide, Galbeta1,3GalNAc.
J.Biol.Chem., 273, 1998
1JFH
DownloadVisualize
BU of 1jfh by Molmil
STRUCTURE OF A PANCREATIC ALPHA-AMYLASE BOUND TO A SUBSTRATE ANALOGUE AT 2.03 ANGSTROM RESOLUTION
Descriptor: 4-S-methyl-4-thio-alpha-D-glucopyranose-(1-4)-methyl 4-thio-alpha-D-glucopyranoside, ALPHA-AMYLASE, CALCIUM ION, ...
Authors:Qian, M, Payan, F.
Deposit date:1997-09-19
Release date:1998-12-02
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structure of a pancreatic alpha-amylase bound to a substrate analogue at 2.03 A resolution.
Protein Sci., 6, 1997
1CS7
DownloadVisualize
BU of 1cs7 by Molmil
SYNTHETIC DNA HAIRPIN WITH STILBENEDIETHER LINKER
Descriptor: 5'-D(GP*(BRU)P*TP*TP*TP*GP*(S02)*CP*AP*AP*AP*AP*C)-3', STRONTIUM ION
Authors:Lewis, F.D, Liu, X, Wu, Y, Miller, S.E, Wasielewski, M.R, Letsinger, R.L, Sanishvili, R, Joachimiak, A, Tereshko, V, Egli, M.
Deposit date:1999-08-17
Release date:2001-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Photoinduced Electron Transfer in Exceptionally Stable Synthetic DNA Hairpins with Stilbenediether Linkers
J.Am.Chem.Soc., 121, 1999
1JTG
DownloadVisualize
BU of 1jtg by Molmil
CRYSTAL STRUCTURE OF TEM-1 BETA-LACTAMASE / BETA-LACTAMASE INHIBITOR PROTEIN COMPLEX
Descriptor: BETA-LACTAMASE INHIBITORY PROTEIN, BETA-LACTAMASE TEM, CALCIUM ION
Authors:Strynadka, N.C.J, Jensen, S.E, Alzari, P.M, James, M.N.
Deposit date:2001-08-20
Release date:2001-10-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal structure and kinetic analysis of beta-lactamase inhibitor protein-II in complex with TEM-1 beta-lactamase.
Nat.Struct.Biol., 8, 2001
1Z5P
DownloadVisualize
BU of 1z5p by Molmil
Crystal structure of MTA/AdoHcy nucleosidase with a ligand-free purine binding site
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Lee, J.E, Smith, G.D, Horvatin, C, Huang, D.J.T, Cornell, K.A, Riscoe, M.K, Howell, P.L.
Deposit date:2005-03-18
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural snapshots of MTA/AdoHcy nucleosidase along the reaction coordinate provide insights into enzyme and nucleoside flexibility during catalysis
J.Mol.Biol., 352, 2005
1ZPG
DownloadVisualize
BU of 1zpg by Molmil
Arginase I covalently modified with propylamine at Q19C
Descriptor: Arginase 1, MANGANESE (II) ION
Authors:Colleluori, D.M, Reczkowski, R.S, Emig, F.A, Cama, E, Cox, J.D, Scolnick, L.R, Compher, K, Jude, K, Han, S, Viola, R.E, Christianson, D.W, Ash, D.E.
Deposit date:2005-05-16
Release date:2005-12-06
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the role of the hyper-reactive histidine residue of arginase.
Arch.Biochem.Biophys., 444, 2005
1JKE
DownloadVisualize
BU of 1jke by Molmil
D-Tyr tRNATyr deacylase from Escherichia coli
Descriptor: D-Tyr-tRNATyr deacylase, ZINC ION
Authors:Ferri-Fioni, M.L, Schmitt, E, Soutourina, J, Plateau, P, Mechulam, Y, Blanquet, S.
Deposit date:2001-07-12
Release date:2002-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of crystalline D-Tyr-tRNA(Tyr) deacylase. A representative of a new class of tRNA-dependent hydrolases.
J.Biol.Chem., 276, 2001
1Z8D
DownloadVisualize
BU of 1z8d by Molmil
Crystal Structure of Human Muscle Glycogen Phosphorylase a with AMP and Glucose
Descriptor: ADENINE, ADENOSINE MONOPHOSPHATE, Glycogen phosphorylase, ...
Authors:Lukacs, C.M, Oikonomakos, N.G, Crowther, R.L, Hong, L.N, Kammlott, R.U, Levin, W, Li, S, Liu, C.M, Lucas-McGady, D, Pietranico, S, Reik, L.
Deposit date:2005-03-30
Release date:2006-03-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of human muscle glycogen phosphorylase a with bound glucose and AMP: An intermediate conformation with T-state and R-state features.
Proteins, 63, 2006
1ZBD
DownloadVisualize
BU of 1zbd by Molmil
STRUCTURAL BASIS OF RAB EFFECTOR SPECIFICITY: CRYSTAL STRUCTURE OF THE SMALL G PROTEIN RAB3A COMPLEXED WITH THE EFFECTOR DOMAIN OF RABPHILIN-3A
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RABPHILIN-3A, ...
Authors:Ostermeier, C, Brunger, A.T.
Deposit date:1998-11-06
Release date:1999-04-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of Rab effector specificity: crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A.
Cell(Cambridge,Mass.), 96, 1999
1YYK
DownloadVisualize
BU of 1yyk by Molmil
Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
Authors:Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
Deposit date:2005-02-25
Release date:2005-11-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1ZDJ
DownloadVisualize
BU of 1zdj by Molmil
STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEX
Descriptor: PROTEIN (MS2 PROTEIN CAPSID), RNA (5'-R(*GP*GP*AP*UP*CP*AP*CP*C)-3')
Authors:Grahn, E, Stonehouse, N, Valegard, K, Vandenworm, S, Liljas, L.
Deposit date:1997-12-18
Release date:1998-07-08
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic studies of RNA hairpins in complexes with recombinant MS2 capsids: implications for binding requirements.
RNA, 5, 1999
1JLC
DownloadVisualize
BU of 1jlc by Molmil
CRYSTAL STRUCTURE OF Y181C MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH PETT-2
Descriptor: HIV-1 RT A-chain, HIV-1 RT B-chain, N-[[3-FLUORO-4-ETHOXY-PYRID-2-YL]ETHYL]-N'-[5-CHLORO-PYRIDYL]-THIOUREA
Authors:Ren, J, Nichols, C, Bird, L, Chamberlain, P, Weaver, K, Short, S, Stuart, D.I, Stammers, D.K.
Deposit date:2001-07-16
Release date:2001-10-03
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural mechanisms of drug resistance for mutations at codons 181 and 188 in HIV-1 reverse transcriptase and the improved resilience of second generation non-nucleoside inhibitors.
J.Mol.Biol., 312, 2001

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon