Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4FFL
DownloadVisualize
BU of 4ffl by Molmil
PylC in complex with L-lysine
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, CARBONATE ION, ...
Authors:Quitterer, F, List, A, Beck, P, Bacher, A, Groll, M.
Deposit date:2012-06-01
Release date:2012-09-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Biosynthesis of the 22nd genetically encoded amino acid pyrrolysine: structure and reaction mechanism of PylC at 1.5A resolution.
J.Mol.Biol., 424, 2012
4GZ9
DownloadVisualize
BU of 4gz9 by Molmil
Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2)
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Janssen, B.J.C, Malinauskas, T, Siebold, C, Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4K2R
DownloadVisualize
BU of 4k2r by Molmil
Structural basis for activation of ZAP-70 by phosphorylation of the SH2-kinase linker
Descriptor: MAGNESIUM ION, PHOSPHATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Yan, Q, Barros, T, Visperas, P.R, Deindl, S, Kadlecek, T.A, Weiss, A, Kuriyan, J.
Deposit date:2013-04-09
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Basis for Activation of ZAP-70 by Phosphorylation of the SH2-Kinase Linker.
Mol.Cell.Biol., 33, 2013
4GRA
DownloadVisualize
BU of 4gra by Molmil
Crystal structure of SULT1A1 bound with PAP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Sulfotransferase 1A1
Authors:Kim, J, Cook, I, Wang, T, Falany, C.N, Leyh, T.S, Almo, S.C.
Deposit date:2012-08-24
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:The gate that governs sulfotransferase selectivity.
Biochemistry, 52, 2013
4ME4
DownloadVisualize
BU of 4me4 by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
Descriptor: FE (III) ION, GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, ...
Authors:Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
Deposit date:2013-08-24
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4MCW
DownloadVisualize
BU of 4mcw by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ...
Authors:Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
Deposit date:2013-08-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4AK3
DownloadVisualize
BU of 4ak3 by Molmil
Crystal structure of Human fibrillar procollagen type III C- propeptide trimer
Descriptor: CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN
Authors:Bourhis, J.M, Mariano, N, Zhao, Y, Harlos, K, Jones, E.Y, Moali, C, Aghajari, N, Hulmes, D.J.S.
Deposit date:2012-02-21
Release date:2012-09-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Basis of Fibrillar Collagen Trimerization and Related Genetic Disorders.
Nat.Struct.Mol.Biol., 19, 2012
4P7T
DownloadVisualize
BU of 4p7t by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: Polyhedral bodies
Authors:Pickersgill, R.W, Frank, S, Pang, A, Warren, M.J.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
4P7V
DownloadVisualize
BU of 4p7v by Molmil
Structural insights into higher-order assembly and function of the bacterial microcompartment protein PduA
Descriptor: GLYCEROL, Polyhedral bodies
Authors:Pang, A, Frank, S, Brown, I.R, Warren, M.J, Pickersgill, R.W.
Deposit date:2014-03-27
Release date:2014-06-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural Insights into Higher Order Assembly and Function of the Bacterial Microcompartment Protein PduA.
J.Biol.Chem., 289, 2014
3T9Q
DownloadVisualize
BU of 3t9q by Molmil
Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis (Mn presoaked)
Descriptor: MANGANESE (II) ION, Stage II sporulation protein E, beta-D-gulopyranose
Authors:Levdikov, V.M, Blagova, E.V, Wilkinson, A.J.
Deposit date:2011-08-03
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structure of the phosphatase domain of the cell fate determinant SpoIIE from Bacillus subtilis.
J.Mol.Biol., 415, 2012
3VN9
DownloadVisualize
BU of 3vn9 by Molmil
Rifined Crystal structure of non-phosphorylated MAP2K6 in a putative auto-inhibition state
Descriptor: 9-{5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]-beta-L-ribofuranosyl}-9H-purin-6-amine, Dual specificity mitogen-activated protein kinase kinase 6, MAGNESIUM ION
Authors:Kinoshita, T, Matsuzaka, H, Nakai, R, Kirii, Y, Yokota, K, Tada, T, Matsumoto, T.
Deposit date:2012-01-05
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of non-phosphorylated MAP2K6 in a putative auto-inhibition state
J.Biochem., 151, 2012
3UTM
DownloadVisualize
BU of 3utm by Molmil
Crystal structure of a mouse Tankyrase-Axin complex
Descriptor: Axin-1, Tankyrase-1
Authors:Cheng, Z, Morrone, S, Xu, W.
Deposit date:2011-11-26
Release date:2012-01-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a Tankyrase-Axin complex and its implications for Axin turnover and Tankyrase substrate recruitment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3W09
DownloadVisualize
BU of 3w09 by Molmil
Influenza virus neuraminidase subtype N9 (TERN) complexed with 2,3-dif guanidino-neu5ac2en inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-3-fluoro-D-glycero-D-galacto-non-2-enonic acid, ...
Authors:Streltsov, V.A.
Deposit date:2012-10-25
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism-based covalent neuraminidase inhibitors with broad-spectrum influenza antiviral activity
Science, 340, 2013
3V9F
DownloadVisualize
BU of 3v9f by Molmil
Crystal Structure of the extracellular domain of the putative hybrid two component system BT3049 from B. thetaiotaomicron
Descriptor: Two-component system sensor histidine kinase/response regulator, hybrid (One-component system)
Authors:Zhang, Z, Liu, Q, Hendrickson, W.A.
Deposit date:2011-12-27
Release date:2012-03-14
Last modified:2014-10-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of apparent saccharide sensors from histidine kinase receptors prevalent in a human gut symbiont.
Febs J., 281, 2014
3VGN
DownloadVisualize
BU of 3vgn by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas putida (pKSI) with bound 3-fluoro-4-nitrophenol
Descriptor: 3-fluoro-4-nitrophenol, Steroid Delta-isomerase
Authors:Caaveiro, J.M.M, Pybus, B, Ringe, D, Petsko, G.A, Sigala, P.A.
Deposit date:2011-08-16
Release date:2012-08-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Quantitative dissection of hydrogen bond-mediated proton transfer in the ketosteroid isomerase active site
Proc.Natl.Acad.Sci.USA, 110, 2013
4EUX
DownloadVisualize
BU of 4eux by Molmil
Structure of neuronal nitric oxide synthase heme domain in complex with 6-(5-(((3R,4R)-4-((6-amino-4-methylpyridin-2-yl)methyl)pyrrolidin-3-yl)oxy)pentyl)-4-methylpyridin-2-amine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-[5-({(3R,4R)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}oxy)pentyl]-4-methylpyridin-2-amine, ACETATE ION, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2012-04-25
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Selective monocationic inhibitors of neuronal nitric oxide synthase. Binding mode insights from molecular dynamics simulations.
J.Am.Chem.Soc., 134, 2012
4EWA
DownloadVisualize
BU of 4ewa by Molmil
Study on structure and function relationships in human Pirin with Fe ion
Descriptor: FE (III) ION, Pirin
Authors:Liu, F, Rehmani, I, Chen, L, Fu, R, Serrano, V, Wilson, D.W, Liu, A.
Deposit date:2012-04-26
Release date:2013-05-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F1P
DownloadVisualize
BU of 4f1p by Molmil
Crystal Structure of mutant S554D for ArfGAP and ANK repeat domain of ACAP1
Descriptor: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1, SULFATE ION, ...
Authors:Sun, F, Pang, X, Zhang, K, Ma, J, Zhou, Q.
Deposit date:2012-05-07
Release date:2012-07-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanistic insights into regulated cargo binding by ACAP1 protein
J.Biol.Chem., 287, 2012
4FGU
DownloadVisualize
BU of 4fgu by Molmil
Crystal structure of prolegumain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Legumain
Authors:Dall, E, Brandstetter, H.
Deposit date:2012-06-05
Release date:2013-07-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Mechanistic and structural studies on legumain explain its zymogenicity, distinct activation pathways, and regulation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4FWJ
DownloadVisualize
BU of 4fwj by Molmil
Native structure of LSD2/AOF1/KDM1b in spacegroup of I222 at 2.9A
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1B, PHOSPHATE ION, ...
Authors:Zhang, Q, Chen, Z.
Deposit date:2012-07-01
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-function analysis reveals a novel mechanism for regulation of histone demethylase LSD2/AOF1/KDM1b
Cell Res., 23, 2013
4G3G
DownloadVisualize
BU of 4g3g by Molmil
Crystal structure of murine NF-kappaB inducing kinase (NIK) V408L bound to a 2-(aminothiazolyl)phenol (cmp3)
Descriptor: 4-fluoro-2-{[4-(pyridin-4-yl)-1,3-thiazol-2-yl]amino}phenol, NF-kappa-beta-inducing kinase
Authors:Hymowitz, S.
Deposit date:2012-07-13
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site.
Structure, 20, 2012
4G3E
DownloadVisualize
BU of 4g3e by Molmil
Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to a 6-alkynylindoline (cmp1)
Descriptor: (2R)-4-[1-(2-amino-5-chloropyrimidin-4-yl)-2,3-dihydro-1H-indol-6-yl]-2-(1,3-thiazol-2-yl)but-3-yn-2-ol, NF-kappa-beta-inducing kinase, SULFATE ION
Authors:Hymowitz, S.G, de Leon-Boenig, G.
Deposit date:2012-07-13
Release date:2012-08-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the catalytic domain of the NF-kappaB inducing kinase reveals a narrow but flexible active site.
Structure, 20, 2012
4DSC
DownloadVisualize
BU of 4dsc by Molmil
Complex structure of abscisic acid receptor PYL3 with (+)-ABA in spacegroup of H32 at 1.95A
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL3, MAGNESIUM ION
Authors:Zhang, X, Chen, Z.
Deposit date:2012-02-18
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Complex Structures of the Abscisic Acid Receptor PYL3/RCAR13 Reveal a Unique Regulatory Mechanism
Structure, 20, 2012
4DSB
DownloadVisualize
BU of 4dsb by Molmil
Complex Structure of Abscisic Acid Receptor PYL3 with (+)-ABA in Spacegroup of I 212121 at 2.70A
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, Abscisic acid receptor PYL3
Authors:Zhang, X, Zhang, Q, Chen, Z.
Deposit date:2012-02-18
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Complex Structures of the Abscisic Acid Receptor PYL3/RCAR13 Reveal a Unique Regulatory Mechanism
Structure, 20, 2012
4GAW
DownloadVisualize
BU of 4gaw by Molmil
Crystal structure of active human granzyme H
Descriptor: CHLORIDE ION, Granzyme H, SULFATE ION
Authors:Wang, L, Li, Q, Wu, L, Zhang, K, Tong, L, Sun, F, Fan, Z.
Deposit date:2012-07-25
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Identification of SERPINB1 as a physiological inhibitor of human granzyme H
J.Immunol., 190, 2013

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon