PDB: 243911 resultsInfo pagesStatus searchChemie searchBIRD

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7O19	Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... Authors: van der Stel, A.X, Gordon, E.R, Sengupta, A, Martinez, A.K, Klepacki, D, Perry, T.N, Herrero del Valle, A, Vazquez-Laslop, N, Sachs, M.S, Cruz-Vera, L.R, Innis, C.A. Deposit date: 2021-03-29 Release date: 2021-09-01 Last modified: 2025-03-12 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural basis for the tryptophan sensitivity of TnaC-mediated ribosome stalling. Nat Commun, 12, 2021
7ODY	Cyanophage S-2L MazG-like pyrophosphohydrolase bound to dGDP and three catalytic Mn2+ ions per active site Descriptor: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, MazG-like pyrophosphohydrolase (MazZ), ... Authors: Czernecki, D, Delarue, M. Deposit date: 2021-04-30 Release date: 2021-09-01 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (1.43 Å) Cite: Characterization of a triad of genes in cyanophage S-2L sufficient to replace adenine by 2-aminoadenine in bacterial DNA. Nat Commun, 12, 2021
4V9O	Control of ribosomal subunit rotation by elongation factor G Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Pulk, A, Cate, J.H.D. Deposit date: 2013-05-03 Release date: 2014-07-09 Last modified: 2025-03-26 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
7OI9	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3B Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7O06	Crystal structure of the N-terminal domain of CEP164(1-109) bound to camelid nanobody 10Z Descriptor: Camelid nanobody 10Z, Centrosomal protein of 164 kDa, SULFATE ION Authors: e Silva, I.R, van Breugel, M. Deposit date: 2021-03-25 Release date: 2021-09-08 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
7OIE	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5B Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OI7	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2 Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OIC	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4 Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2021-10-13 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7O3B	Crystal structure of the TTBK2-CEP164 complex bound to a camelid nanobody Descriptor: Nanobody 36Z, Tau-tubulin kinase 2,Centrosomal protein of 164 kDa Authors: e Silva, I.R, van Breugel, M. Deposit date: 2021-04-01 Release date: 2021-09-15 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
7OIB	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3D Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OJ0	Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Su, T, Kudva, R, Becker, T, Berninghausen, O, Heijne, G, Cheng, J, Beckmann, R. Deposit date: 2021-05-13 Release date: 2021-09-15 Last modified: 2025-03-12 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide. Nucleic Acids Res., 49, 2021
7OIZ	Cryo-EM structure of 70S ribosome stalled with TnaC peptide Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Su, T, Kudva, R, Becker, T, Berninghausen, O, Heijne, G, Cheng, J, Beckmann, R. Deposit date: 2021-05-13 Release date: 2021-09-15 Last modified: 2025-03-12 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural basis of l-tryptophan-dependent inhibition of release factor 2 by the TnaC arrest peptide. Nucleic Acids Res., 49, 2021
7O0S	Crystal structure of the N-terminal domain of CEP164(1-109) bound to camelid nanobody 36Z Descriptor: Centrosomal protein of 164 kDa, Nanobody 36Z Authors: e Silva, I.R, van Breugel, M. Deposit date: 2021-03-26 Release date: 2021-09-15 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
7ONI	Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2* Descriptor: Cullin-5, E3 ubiquitin-protein ligase ARIH2, NEDD8, ... Authors: Kostrhon, S.P, prabu, J.R, Schulman, B.A. Deposit date: 2021-05-25 Release date: 2021-09-15 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: CUL5-ARIH2 E3-E3 ubiquitin ligase structure reveals cullin-specific NEDD8 activation. Nat.Chem.Biol., 17, 2021
7OI8	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OID	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5A Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7OIA	Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3C Descriptor: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ... Authors: Cheng, J, Berninghausen, O, Beckmann, R. Deposit date: 2021-05-11 Release date: 2021-09-15 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: A distinct assembly pathway of the human 39S late pre-mitoribosome. Nat Commun, 12, 2021
7NY0	Solution structure of Boskar4; a de novo designed G-CSF agonist Descriptor: Boskar4 Authors: ElGamacy, M, Coles, M. Deposit date: 2021-03-19 Release date: 2021-10-06 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: A topological refactoring design strategy yields highly stable granulopoietic proteins. Nat Commun, 13, 2022
3EDF	Structural base for cyclodextrin hydrolysis Descriptor: CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Cyclomaltodextrinase, ... Authors: Buedenbender, S, Schulz, G.E. Deposit date: 2008-09-03 Release date: 2009-03-03 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural base for enzymatic cyclodextrin hydrolysis J.Mol.Biol., 385, 2009
7OOP	Pol II-CSB-CSA-DDB1-UVSSA-PAF-SPT6 (Structure 3) Descriptor: DNA damage-binding protein 1, DNA excision repair protein ERCC-6, DNA excision repair protein ERCC-8, ... Authors: Kokic, G, Cramer, P. Deposit date: 2021-05-28 Release date: 2021-10-06 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021
7OG3	IRED-88 Descriptor: NAD(P)-dependent oxidoreductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SODIUM ION Authors: Faller, M, Koch, E. Deposit date: 2021-05-06 Release date: 2021-10-06 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.904 Å) Cite: Machine-Directed Evolution of an Imine Reductase for Activity and Stereoselectivity Acs Catalysis, 2021
7OO2	Crystal structure of an antibody targeting the capsular polysaccharide of serogroup X Neisseria meningitidis (MenX) Descriptor: THIOCYANATE ION, anti-MenX Fab heavy chain, anti-MenX Fab light chain Authors: Pietri, G.P, de Ruyck, J, Lenac, T, Adamo, R, Bouckaert, J. Deposit date: 2021-05-26 Release date: 2021-10-06 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Elucidating the Structural and Minimal Protective Epitope of the Serogroup X Meningococcal Capsular Polysaccharide. Front Mol Biosci, 8, 2021
7OO3	Pol II-CSB-CSA-DDB1-UVSSA (Structure1) Descriptor: CSB element, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ... Authors: Kokic, G, Cramer, P. Deposit date: 2021-05-26 Release date: 2021-10-06 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021
7OPD	Pol II-CSB-CRL4CSA-UVSSA-SPT6-PAF (Structure 5) Descriptor: Cullin-4A, DNA damage-binding protein 1, DNA excision repair protein ERCC-6, ... Authors: Kokic, G, Cramer, P. Deposit date: 2021-05-31 Release date: 2021-10-06 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structural basis of human transcription-DNA repair coupling. Nature, 598, 2021
7OMG	Crystal structure of KOD DNA Polymerase in a ternary complex with an Uracil containing template Descriptor: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, ... Authors: Betz, K, Kropp, H.M, Diederichs, K, Marx, A. Deposit date: 2021-05-22 Release date: 2021-10-13 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural Basis for The Recognition of Deaminated Nucleobases by An Archaeal DNA Polymerase. Chembiochem, 22, 2021

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