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1XBD
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BU of 1xbd by Molmil
INTERNAL XYLAN BINDING DOMAIN FROM CELLULOMONAS FIMI XYLANASE D, NMR, 5 STRUCTURES
Descriptor: XYLANASE D
Authors:Simpson, P.J, Bolam, D.N, Cooper, A, Ciruela, A, Hazlewood, G.P, Gilbert, H.J, Williamson, M.P.
Deposit date:1998-10-16
Release date:1999-07-21
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:A family IIb xylan-binding domain has a similar secondary structure to a homologous family IIa cellulose-binding domain but different ligand specificity.
Structure Fold.Des., 7, 1999
5TNO
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BU of 5tno by Molmil
Discovery of novel aminobenzisoxazole derivatives as orally available factor IXa inhibitors
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Coagulation factor IX, SODIUM ION, ...
Authors:Sakurada, I, Endo, T, Hikita, K, Hirabayashi, T, Hosaka, Y, Kato, Y, Maeda, Y, Matsumoto, S, Mizuno, T, Nagasue, H, Nishimura, T, Shimada, S, Shinozaki, M, Taguchi, K, Takeuchi, K, Yokoyama, T, Hruza, A, Reichert, P, Zhang, T, Wood, H.B, Nakao, K, Furusako, S.
Deposit date:2016-10-14
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Discovery of novel aminobenzisoxazole derivatives as orally available factor IXa inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
1Y2P
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BU of 1y2p by Molmil
Solution structure of Hstx3P
Descriptor: Neurotoxin HsTX1
Authors:Mosbah, A, Gariga, L, Darbon, H, Sabatier, J.M.
Deposit date:2004-11-23
Release date:2005-11-01
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The impact of the fourth disulfide bridge in scorpion toxins of the alpha-KTx6 subfamily
Proteins, 61, 2005
5TFB
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BU of 5tfb by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with 7-methyl-GTP
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-24
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TFI
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BU of 5tfi by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TFA
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BU of 5tfa by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with dUTP
Descriptor: Cystic fibrosis transmembrane conductance regulator, DEOXYURIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-24
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
5TFG
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BU of 5tfg by Molmil
Nucleotide-binding domain 1 of the human cystic fibrosis transmembrane conductance regulator (CFTR) with 5-methyl-UTP
Descriptor: 5-Methyluridine triphosphate, Cystic fibrosis transmembrane conductance regulator, MAGNESIUM ION
Authors:Wang, C, Aleksandrov, A.A, Yang, Z, Forouhar, F, Proctor, E, Kota, P, An, J, Kaplan, A, Khazanov, N, Boel, G, Stockwell, B.R, Senderowitz, H, Dokholyan, N.V, Riordan, J.R, Brouillette, C.G, Hunt, J.F.
Deposit date:2016-09-25
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Thermodynamic correction of F508del-CFTR by ligand binding to a remote site in the mutated domain
To Be Published
2A06
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BU of 2a06 by Molmil
Bovine cytochrome bc1 complex with stigmatellin bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
Authors:Huang, L.S, Cobessi, D, Tung, E.Y, Berry, E.A.
Deposit date:2005-06-16
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern.
J.Mol.Biol., 351, 2005
5TCE
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BU of 5tce by Molmil
N-terminal microdomain of 34-mers from HsDHODH - N-t(DH)
Descriptor: Dihydroorotate dehydrogenase (quinone), mitochondrial
Authors:Crusca, E, Munte, C.E.
Deposit date:2016-09-14
Release date:2017-09-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Conformational changes of the HsDHODH N-terminal Microdomain via DEER Spectroscopy.
J Phys Chem B, 119, 2015
5UP5
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BU of 5up5 by Molmil
Solution structure of the de novo mini protein EHEE_rd1_0284
Descriptor: EHEE_rd1_0284
Authors:Houliston, S, Rocklin, G.J, Lemak, A, Carter, L, Chidyausiku, T.M, Baker, D, Arrowsmith, C.H.
Deposit date:2017-02-01
Release date:2017-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Global analysis of protein folding using massively parallel design, synthesis, and testing.
Science, 357, 2017
5V6H
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BU of 5v6h by Molmil
Crystal structure of Myosin VI in complex with GH2 domain of GIPC2
Descriptor: PDZ domain-containing protein GIPC2, Unconventional myosin-VI
Authors:Shang, G, Zhang, X.
Deposit date:2017-03-16
Release date:2017-05-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex.
Elife, 6, 2017
2A70
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BU of 2a70 by Molmil
Crystal structure of Emp47p carbohydrate recognition domain (CRD), monoclinic crystal form 2
Descriptor: 1,2-ETHANEDIOL, Emp47p
Authors:Satoh, T, Sato, K, Kanoh, A, Yamashita, K, Katoh, R, Nakano, A, Wakatsuki, S.
Deposit date:2005-07-04
Release date:2006-01-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structures of the carbohydrate recognition domain of Ca2+-independent cargo receptors Emp46p and Emp47p.
J.Biol.Chem., 281, 2006
5UZT
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BU of 5uzt by Molmil
Structure of wild type pre-miR21 apical loop
Descriptor: pre-miR-21
Authors:Shortridge, M.D, Varani, G.
Deposit date:2017-02-27
Release date:2017-05-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Macrocyclic Peptide Ligand Binds the Oncogenic MicroRNA-21 Precursor and Suppresses Dicer Processing.
ACS Chem. Biol., 12, 2017
5UP1
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BU of 5up1 by Molmil
Solution structure of the de novo mini protein EEHEE_rd3_1049
Descriptor: EEHEE_rd3_1049
Authors:Houliston, S, Rocklin, G.J, Lemak, A, Carter, L, Chidyausiku, T.M, Baker, D, Arrowsmith, C.H.
Deposit date:2017-02-01
Release date:2017-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Global analysis of protein folding using massively parallel design, synthesis, and testing.
Science, 357, 2017
1YEE
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BU of 1yee by Molmil
STRUCTURE OF A CATALYTIC ANTIBODY, IGG2A FAB FRAGMENT (D2.5)
Descriptor: 4-NITRO-BENZYLPHOSPHONOBUTANOYL-GLYCINE, IGG2A FAB FRAGMENT (D2.5)
Authors:Golinelli-Pimpaneau, B, Knossow, M.
Deposit date:1997-04-15
Release date:1997-10-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural convergence in the active sites of a family of catalytic antibodies.
Science, 275, 1997
5V39
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BU of 5v39 by Molmil
Crystal structure of human vitamin D receptor ligand binding domain in complex with a VDRM
Descriptor: 5-(3-{4-[(2S)-2-hydroxy-3,3-dimethylbutoxy]-3-methylphenyl}pentan-3-yl)-3-methyl-N-(1H-tetrazol-5-yl)thiophene-2-carboxamide, Vitamin D3 receptor
Authors:Wang, Y, Pelletier, L.
Deposit date:2017-03-06
Release date:2018-03-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:HDX reveals the conformational dynamics of DNA sequence specific VDR co-activator interactions.
Nat Commun, 8, 2017
1OIG
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BU of 1oig by Molmil
The solution structure of the DPY module from the Dumpy protein
Descriptor: Dumpy, isoform Y
Authors:Wilkin, M.B, Becker, M.N, Mulvey, D, Phan, I, Chao, A, Cooper, K, Chung, H.J, Campbell, I.D, Baron, M, MacIntyre, R.
Deposit date:2003-06-18
Release date:2003-06-26
Last modified:2018-06-20
Method:SOLUTION NMR
Cite:Drosophila Dumpy is a Gigantic Extracellular Protein Required to Maintain Tension at Epidermal-Cuticle Attachment Sites
Curr.Biol., 10, 2000
5V6E
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BU of 5v6e by Molmil
Crystal structure of Myosin VI in complex with GH2 domain of GIPC1
Descriptor: PDZ domain-containing protein GIPC1, Unconventional myosin-VI
Authors:Shang, G, Zhang, X.
Deposit date:2017-03-16
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.506 Å)
Cite:Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex.
Elife, 6, 2017
5V6T
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BU of 5v6t by Molmil
The Plexin D1 intracellular region in complex with GIPC1
Descriptor: PDZ domain-containing protein GIPC1, Plexin-D1, SULFATE ION
Authors:Shang, G, Zhang, X.
Deposit date:2017-03-17
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.189 Å)
Cite:Structure analyses reveal a regulated oligomerization mechanism of the PlexinD1/GIPC/myosin VI complex.
Elife, 6, 2017
1GZ2
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BU of 1gz2 by Molmil
Crystal structure of the Ovocleidin-17 a major protein of the Gallus gallus eggshell calcified layer.
Descriptor: OVOCLEIDIN-17
Authors:Reyes-Grajeda, J.P, Moreno, A, Romero, A.
Deposit date:2002-05-13
Release date:2003-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallization and Preliminary X-Ray Analysis of Ovocleidin-17 a Major Protein of the Gallus Gallus Eggshell Calcified Layer
Protein Pept.Lett., 9, 2002
1Z2J
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BU of 1z2j by Molmil
Solution structure of the HIV-1 frameshift inducing element
Descriptor: HIV-1 frameshift site RNA
Authors:Staple, D.W, Butcher, S.E.
Deposit date:2005-03-08
Release date:2005-06-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Thermodynamic Investigation of the HIV-1 Frameshift Inducing Element.
J.Mol.Biol., 349, 2005
1SJY
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BU of 1sjy by Molmil
Crystal Structure of NUDIX HYDROLASE DR1025 FROM DEINOCOCCUS RADIODURANS
Descriptor: MutT/nudix family protein
Authors:Ranatunga, W, Hill, E.E, Mooster, J.L, Holbrook, E.L, Schulze-Gahmen, U, Xu, W, Bessman, M.J, Brenner, S.E, Holbrook, S.R, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-03-04
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Structural Studies of the Nudix Hydrolase DR1025 From Deinococcus radiodurans and its Ligand Complexes.
J.Mol.Biol., 339, 2004
1QI6
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BU of 1qi6 by Molmil
SECOND APO FORM OF AN NADP DEPENDENT ALDEHYDE DEHYDROGENASE WITH GLU250 SITUATED 3.7 A FROM CYS284
Descriptor: PROTEIN (NADP DEPENDENT NONPHOSPHORYLATING GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE), SULFATE ION
Authors:Cobessi, D, Tete-Favier, F, Marchal, S, Branlant, G, Aubry, A.
Deposit date:1999-06-02
Release date:2001-01-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical investigations of the catalytic mechanism of an NADP-dependent aldehyde dehydrogenase from Streptococcus mutans.
J.Mol.Biol., 300, 2000
2VEF
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BU of 2vef by Molmil
Dihydropteroate synthase from Streptococcus pneumoniae
Descriptor: DIHYDROPTEROATE SYNTHASE, PHOSPHATE ION
Authors:Derrick, J.P, Levy, C.
Deposit date:2007-10-24
Release date:2008-03-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dihydropteroate Synthase from Streptococcus Pneumoniae: Structure, Ligand Recognition and Mechanism of Sulfonamide Resistance.
Biochem.J., 412, 2008
5VB9
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BU of 5vb9 by Molmil
IL-17A in complex with peptide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Interleukin-17A, ...
Authors:Antonysamy, S, Russell, M, Zhang, A, Groshong, C, Manglicmot, D, Lu, F, Benach, J, Wasserman, S.R, Zhang, F, Afshar, S, Bina, H, Broughton, H, Chalmers, M, Dodge, J, Espada, A, Jones, S, Ting, J.P, Woodman, M.
Deposit date:2017-03-28
Release date:2018-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Utilization of peptide phage display to investigate hotspots on IL-17A and what it means for drug discovery.
PLoS ONE, 13, 2018

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