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3AEK
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BU of 3aek by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
Descriptor: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N, ...
Authors:Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
Deposit date:2010-02-10
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010
3AEU
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BU of 3aeu by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
Descriptor: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N
Authors:Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
Deposit date:2010-02-10
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010
3AER
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BU of 3aer by Molmil
Structure of the light-independent protochlorophyllide reductase catalyzing a key reduction for greening in the dark
Descriptor: IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase subunit B, Light-independent protochlorophyllide reductase subunit N
Authors:Muraki, N, Nomata, J, Shiba, T, Fujita, Y, Kurisu, G.
Deposit date:2010-02-10
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:X-ray crystal structure of the light-independent protochlorophyllide reductase
Nature, 465, 2010
1P90
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BU of 1p90 by Molmil
The Three-dimensional Structure of the Core Domain of NafY from Azotobacter vinelandii determined at 1.8 resolution
Descriptor: 1,2-ETHANEDIOL, hypothetical protein
Authors:Dyer, D.H, Rubio, L.M, Thoden, J.B, Holden, H.M, Ludden, P.W, Rayment, I.
Deposit date:2003-05-08
Release date:2003-08-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Three-dimensional Structure of the Core Domain of NafY from Azotobacter vinelandii determined at 1.8 A resolution
J.Biol.Chem., 278, 2003
5K9B
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BU of 5k9b by Molmil
Azotobacter vinelandii Flavodoxin II
Descriptor: FLAVIN MONONUCLEOTIDE, Flavodoxin-2, MAGNESIUM ION
Authors:Rees, D.C, Segal, H.M, Spatzal, T.
Deposit date:2016-05-31
Release date:2017-08-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.174 Å)
Cite:Electrochemical and structural characterization of Azotobacter vinelandii flavodoxin II.
Protein Sci., 26, 2017
5V5W
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BU of 5v5w by Molmil
Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges
Descriptor: MAM domain-containing glycosylphosphatidylinositol anchor protein 1, SULFATE ION
Authors:Machius, M, Gangwar, S.P, Rudenko, G.
Deposit date:2017-03-15
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.718 Å)
Cite:Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges.
Neuron, 94, 2017
5V5V
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BU of 5v5v by Molmil
Complex of NLGN2 with MDGA1 Ig1-Ig2
Descriptor: MAM domain-containing glycosylphosphatidylinositol anchor protein 1, Neuroligin-2
Authors:Gangwar, S.P, Machius, M, Rudenko, G.
Deposit date:2017-03-15
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (4.11 Å)
Cite:Molecular Mechanism of MDGA1: Regulation of Neuroligin 2:Neurexin Trans-synaptic Bridges.
Neuron, 94, 2017
5OJ6
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BU of 5oj6 by Molmil
Crystal structure of the chicken MDGA1 ectodomain in complex with the human neuroligin 1 (NL1(-A-B)) cholinesterase domain.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, Neuroligin-1, ...
Authors:Elegheert, J, Clayton, A.J, Aricescu, A.R.
Deposit date:2017-07-20
Release date:2017-08-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural Mechanism for Modulation of Synaptic Neuroligin-Neurexin Signaling by MDGA Proteins.
Neuron, 95, 2017
5OJ2
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BU of 5oj2 by Molmil
Crystal structure of the chicken MDGA1 ectodomain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Elegheert, J, Clayton, A.J, Aricescu, A.R.
Deposit date:2017-07-20
Release date:2017-08-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Mechanism for Modulation of Synaptic Neuroligin-Neurexin Signaling by MDGA Proteins.
Neuron, 95, 2017
5XEQ
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BU of 5xeq by Molmil
Crystal Structure of human MDGA1 and human neuroligin-2 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MAM domain-containing glycosylphosphatidylinositol anchor protein 1, ...
Authors:Kim, H.M, Kim, J.A, Kim, D.
Deposit date:2017-04-05
Release date:2017-07-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.136 Å)
Cite:Structural Insights into Modulation of Neurexin-Neuroligin Trans-synaptic Adhesion by MDGA1/Neuroligin-2 Complex
Neuron, 94, 2017
3ZYY
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BU of 3zyy by Molmil
Reductive activator for corrinoid,iron-sulfur protein
Descriptor: (R,R)-2,3-BUTANEDIOL, FE2/S2 (INORGANIC) CLUSTER, IRON-SULFUR CLUSTER BINDING PROTEIN, ...
Authors:Hennig, S.E, Jeoung, J.-H, Goetzl, S, Dobbek, H.
Deposit date:2011-08-30
Release date:2012-04-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Redox-Dependent Complex Formation by an ATP-Dependent Activator of the Corrinoid/Iron-Sulfur Protein.
Proc.Natl.Acad.Sci.USA, 109, 2012
2WC1
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BU of 2wc1 by Molmil
Three-dimensional Structure of the Nitrogen Fixation Flavodoxin (NifF) from Rhodobacter capsulatus at 2.2 A
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Perez-Dorado, I, Bittel, C, Hermoso, J.A, Cortez, N, Carrillo, N.
Deposit date:2009-03-06
Release date:2010-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural and Phylogenetic Analysis of Rhodobacter Capsulatus Niff: Uncovering General Features of Nitrogen-Fixation (Nif)-Flavodoxins.
Int.J.Mol.Sci., 14, 2013
6Y01
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BU of 6y01 by Molmil
The structure of the molybdenum cofactor binding protein from the phototrophic bacterium Rippkaea orientalis
Descriptor: CHLORIDE ION, IMIDAZOLE, p450 cytochrome, ...
Authors:Krausze, J.
Deposit date:2020-02-05
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:The structure of the Moco carrier protein from Rippkaea orientalis.
Acta Crystallogr.,Sect.F, 76, 2020
8AHX
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BU of 8ahx by Molmil
Cryo-EM structure of the nitrogen-fixation associated NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2022-07-24
Release date:2023-11-01
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
4F6T
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BU of 4f6t by Molmil
The crystal structure of the molybdenum storage protein (MoSto) from Azotobacter vinelandii loaded with various polyoxometalates
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MO(6)-O(26) Cluster, ...
Authors:Kowalewski, B, Poppe, J, Schneider, K, Demmer, U, Warkentin, E, Ermler, U.
Deposit date:2012-05-15
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nature's Polyoxometalate Chemistry: X-ray Structure of the Mo Storage Protein Loaded with Discrete Polynuclear Mo-O Clusters.
J.Am.Chem.Soc., 134, 2012
3SBP
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BU of 3sbp by Molmil
Pseudomonas stutzeri nitrous oxide reductase, P1 crystal form
Descriptor: CALCIUM ION, CHLORIDE ION, DINUCLEAR COPPER ION, ...
Authors:Pomowski, A, Zumft, W.G, Kroneck, P.M.H, Einsle, O.
Deposit date:2011-06-06
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:N2O binding at a [4Cu:2S] copper-sulphur cluster in nitrous oxide reductase.
Nature, 477, 2011
3SBR
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BU of 3sbr by Molmil
Pseudomonas stutzeri nitrous oxide reductase, P1 crystal form with substrate
Descriptor: CALCIUM ION, CHLORIDE ION, DINUCLEAR COPPER ION, ...
Authors:Pomowski, A, Zumft, W.G, Kroneck, P.M.H, Einsle, O.
Deposit date:2011-06-06
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:N2O binding at a [4Cu:2S] copper-sulphur cluster in nitrous oxide reductase.
Nature, 477, 2011
3SBQ
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BU of 3sbq by Molmil
Pseudomonas stutzeri nitrous oxide reductase, P65 crystal form
Descriptor: CALCIUM ION, CHLORIDE ION, DINUCLEAR COPPER ION, ...
Authors:Pomowski, A, Zumft, W.G, Kroneck, P.M.H, Einsle, O.
Deposit date:2011-06-06
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:N2O binding at a [4Cu:2S] copper-sulphur cluster in nitrous oxide reductase.
Nature, 477, 2011
8RB8
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BU of 8rb8 by Molmil
Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii, purified with 2-ME/TCEP, NADH added
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2023-12-03
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
8RB9
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BU of 8rb9 by Molmil
Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii, NADH added
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2023-12-03
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
8RBM
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BU of 8rbm by Molmil
Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii, ferricyanide oxidized
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2023-12-04
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.24 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
8RBQ
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BU of 8rbq by Molmil
Cryo-EM structure of the NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii, dithionite reduced
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2023-12-04
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
1UUX
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BU of 1uux by Molmil
Structure of a molybdopterin-bound cnx1g domain links molybdenum and copper metabolism
Descriptor: COPPER (I) ION, FORMIC ACID, IMIDAZOLE, ...
Authors:Kuper, J, Llamas, A, Hecht, H.J, Mendel, R.R, Schwarz, G.
Deposit date:2004-01-12
Release date:2004-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a Molybdopterin-Bound Cnx1G Domain Links Molybdenum and Copper Metabolism
Nature, 430, 2004
1UUY
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BU of 1uuy by Molmil
Structure of a molybdopterin-bound cnx1g domain links molybdenum and copper metabolism
Descriptor: ADENOSINE MONOPHOSPHATE, COPPER (I) ION, FORMIC ACID, ...
Authors:Kuper, J, Llamas, A, Hecht, H.J, Mendel, R.R, Schwarz, G.
Deposit date:2004-01-12
Release date:2004-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a Molybdopterin-Bound Cnx1G Domain Links Molybdenum and Copper Metabolism
Nature, 430, 2004
6UYK
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BU of 6uyk by Molmil
Dark-operative protochlorophyllide oxidoreductase in the nucleotide-free form.
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Authors:Bacik, J.P, Imran, S.M.S, Watkins, M.B, Corless, E, Antony, E, Ando, N.
Deposit date:2019-11-13
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and released upon ATP binding.
J.Biol.Chem., 296, 2020

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