PDB: 231319 resultsInfo pagesStatus searchChemie searchBIRD

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9J8M	Cryo-EM structure of BAF-Lamin A/C IgF-nucleosome complex (High mobility complex) Descriptor: Barrier-to-autointegration factor, DNA (193-MER), Histone H2A type 1-B/E, ... Authors: Horikoshi, N, Miyake, R, Sogawa-Fujiwara, C, Ogasawara, M, Takizawa, Y, Kurumizaka, H. Deposit date: 2024-08-21 Release date: 2025-02-26 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (3.82 Å) Cite: Cryo-EM structures of the BAF-Lamin A/C complex bound to nucleosomes. Nat Commun, 16, 2025
8YT7	Crystal structure of the MAM domain of Spodoptera frugiperda Scavenger Receptor-C Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Scavenger receptor SR-C-like protein Authors: Lan, J, Wang, C.H. Deposit date: 2024-03-25 Release date: 2025-04-02 Last modified: 2025-04-16 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Binding Analysis of Sf-SR-C MAM Domain and Sf-FGFR Ectodomain to Vip3Aa. Insects, 15, 2024
8TAU	APC/C-CDH1-UBE2C-UBE2S-Ubiquitin-CyclinB Descriptor: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... Authors: Bodrug, T, Welsh, K.A, Bolhuis, D.L, Paulakonis, E, Martinez-Chacin, R.C, Liu, B, Pinkin, N, Bonacci, T, Cui, L, Xu, P, Roscow, O, Amann, S.J, Grishkovskaya, I, Emanuele, M.J, Harrison, J.S, Steimel, J.P, Hahn, K.M, Zhang, W, Zhong, E, Haselbach, D, Brown, N.G. Deposit date: 2023-06-27 Release date: 2023-09-27 Last modified: 2023-12-13 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Time-resolved cryo-EM (TR-EM) analysis of substrate polyubiquitination by the RING E3 anaphase-promoting complex/cyclosome (APC/C). Nat.Struct.Mol.Biol., 30, 2023
7ZQZ	F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-03 Release date: 2023-05-17 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.68 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZSW	F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO Complex Descriptor: Cytochrome c, GLYCEROL, HEME C, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-09 Release date: 2023-05-17 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.94 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZRX	F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous State Descriptor: Cytochrome c, GLYCEROL, HEME C, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-05 Release date: 2023-05-17 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.04 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZSV	F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Chemically Reduced Ferrous Form Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-09 Release date: 2023-05-17 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.74 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZRW	F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Descriptor: Cytochrome c, GLYCEROL, HEME C, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-05 Release date: 2023-05-17 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.96 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZS4	F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath) Descriptor: Cytochrome c, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-06 Release date: 2023-05-17 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.75 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
9D8P	Focused map of Cryo-EM structure of Ubiquitin C-degron bound to KLHDC10-EloB/C Descriptor: Elongin-B, Elongin-C, Kelch domain-containing protein 10, ... Authors: Chittori, S, Scott, D.C, Schulman, B.A. Deposit date: 2024-08-19 Release date: 2024-11-20 Last modified: 2025-02-05 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases. Nat Commun, 15, 2024
7ZVZ	Cytochrome c prime beta from Methylococcus capsulatus (Bath): Chemically Reduced Ferrous Form Descriptor: Cytochrome c, GLYCEROL, HEME C, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-17 Release date: 2023-05-24 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.68 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
7ZPS	Cytochrome c prime beta from Methylococcus capsulatus (Bath): NO complex Descriptor: Cytochrome c, GLYCEROL, HEME C, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-04-28 Release date: 2023-05-10 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.56 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
9D1Z	Structure of G75Q Ubiquitin bound to KLHDC3-EloB/C Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Elongin-B, Elongin-C, ... Authors: Schulman, B.A, Scott, D.C. Deposit date: 2024-08-08 Release date: 2024-11-20 Last modified: 2025-02-05 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases. Nat Commun, 15, 2024
3M97	Structure of the soluble domain of cytochrome c552 with its flexible linker segment from Paracoccus denitrificans Descriptor: Cytochrome c-552, HEME C, ZINC ION Authors: Rajendran, C, Ermler, U, Ludwig, B, Michel, H. Deposit date: 2010-03-20 Release date: 2010-07-21 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.332 Å) Cite: Structure at 1.5 A resolution of cytochrome c(552) with its flexible linker segment, a membrane-anchored protein from Paracoccus denitrificans. Acta Crystallogr.,Sect.D, 66, 2010
6CAM	Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence Descriptor: CALCIUM ION, Glucan-binding protein C, beta-D-glucopyranose Authors: Schormann, N, Mieher, J.L, Deivanayagam, C. Deposit date: 2018-01-31 Release date: 2018-05-09 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Glucan Binding Protein C of Streptococcus mutans Mediates both Sucrose-Independent and Sucrose-Dependent Adherence. Infect. Immun., 86, 2018
5KKE	Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with CYMAL5 Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, CHLORIDE ION, Cytochrome c iso-1, ... Authors: Bowler, B.E, Whitby, F.G. Deposit date: 2016-06-21 Release date: 2017-03-22 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.701 Å) Cite: Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons. J. Am. Chem. Soc., 138, 2016
5KLU	Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with omega-undecylenyl-beta-D-maltopyranoside Descriptor: Cytochrome c iso-1, HEME C, SULFATE ION, ... Authors: Bowler, B.E, Whitby, F.G. Deposit date: 2016-06-25 Release date: 2017-03-22 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons. J. Am. Chem. Soc., 138, 2016
6GHD	Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases Descriptor: 1,2-ETHANEDIOL, Barrier-to-autointegration factor, Emerin, ... Authors: Samson, C, Petitalot, A, Celli, F, Herrada, I, Ropars, V, Ledu, M.H, Nhiri, N, Arteni, A.A, Buendia, B, ZinnJustin, S. Deposit date: 2018-05-07 Release date: 2018-08-08 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural analysis of the ternary complex between lamin A/C, BAF and emerin identifies an interface disrupted in autosomal recessive progeroid diseases. Nucleic Acids Res., 46, 2018
3KQN	Three Conformational Snapshots of the Hepatitis C Virus NS3 Helicase Reveal a Ratchet Translocation Mechanism Descriptor: 5'-D(*TP*TP*TP*TP*TP*T)-3', ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... Authors: Gu, M, Rice, C.M. Deposit date: 2009-11-17 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism. Proc.Natl.Acad.Sci.USA, 107, 2010
3KQU	Three Conformational Snapshots of the Hepatitis C Virus NS3 Helicase Reveal a Ratchet Translocation Mechanism Descriptor: 5'-D(*T*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... Authors: Gu, M, Rice, C.M. Deposit date: 2009-11-17 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Inaugural Article: Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism. Proc.Natl.Acad.Sci.USA, 107, 2010
5FGC	Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC33.8 Descriptor: Anti-HCV E2 Fab HC33.8 heavy chain, Anti-HCV E2 Fab HC33.8 light chain, Genome polyprotein Authors: Girard-Blanc, C, Rey, F.A, Krey, T. Deposit date: 2015-12-20 Release date: 2016-01-20 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Antibody Response to Hypervariable Region 1 Interferes with Broadly Neutralizing Antibodies to Hepatitis C Virus. J.Virol., 90, 2016
7ZSX	F32V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-09 Release date: 2023-05-17 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.77 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
9D1Y	Structure of G75R Ubiquitin bound to KLHDC3-EloB/C Descriptor: Elongin-B, Elongin-C, GLYCEROL, ... Authors: Schulman, B.A, Scott, D.C. Deposit date: 2024-08-08 Release date: 2024-11-20 Last modified: 2025-02-05 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases. Nat Commun, 15, 2024
7ZTI	F61V Cytochrome c prime beta from Methylococcus capsulatus (Bath): CO Complex Descriptor: CARBON MONOXIDE, Cytochrome c, GLYCEROL, ... Authors: Adams, H.R, Hough, M.A. Deposit date: 2022-05-10 Release date: 2023-05-24 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.09 Å) Cite: A heme pocket aromatic quadrupole modulates gas binding to cytochrome c'-beta : Implications for NO sensors. J.Biol.Chem., 299, 2023
9D1I	Structure of Ubiquitin bound to KLHDC3-EloB/C Descriptor: Elongin-B, Elongin-C, GLYCEROL, ... Authors: Schulman, B.A, Scott, D.C. Deposit date: 2024-08-07 Release date: 2024-11-20 Last modified: 2025-02-05 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases. Nat Commun, 15, 2024

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