Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QLH
DownloadVisualize
BU of 3qlh by Molmil
HIV-1 Reverse Transcriptase in Complex with Manicol at the RNase H Active Site and TMC278 (Rilpivirine) at the NNRTI Binding Pocket
Descriptor: (2S)-5,7-dihydroxy-9-methyl-2-(prop-1-en-2-yl)-1,2,3,4-tetrahydro-6H-benzo[7]annulen-6-one, 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
Authors:Himmel, D.M, Wojtak, K, Bauman, J.D, Arnold, E.
Deposit date:2011-02-02
Release date:2011-12-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthesis, activity, and structural analysis of novel alpha-hydroxytropolone inhibitors of human immunodeficiency virus reverse transcriptase-associated ribonuclease H.
J.Med.Chem., 54, 2011
3G43
DownloadVisualize
BU of 3g43 by Molmil
Crystal structure of the calmodulin-bound Cav1.2 C-terminal regulatory domain dimer
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent L-type calcium channel subunit alpha-1C
Authors:Fallon, J.L, Quiocho, F.A.
Deposit date:2009-02-03
Release date:2009-03-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of dimeric cardiac L-type calcium channel regulatory domains bridged by Ca2+{middle dot}calmodulins.
Proc.Natl.Acad.Sci.USA, 106, 2009
3G4Z
DownloadVisualize
BU of 3g4z by Molmil
Crystal Structure of NiSOD Y9F mutant at 1.9 A
Descriptor: BROMIDE ION, NICKEL (II) ION, Superoxide dismutase [Ni]
Authors:Garman, S.C, Guce, A.I, Herbst, R.W, Bryngelson, P.A, Cabelli, D.E, Higgins, K.A, Ryan, K.C, Maroney, M.J.
Deposit date:2009-02-04
Release date:2009-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Role of conserved tyrosine residues in NiSOD catalysis: a case of convergent evolution
Biochemistry, 48, 2009
3G5D
DownloadVisualize
BU of 3g5d by Molmil
Kinase domain of cSrc in complex with Dasatinib
Descriptor: GLYCEROL, N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, Proto-oncogene tyrosine-protein kinase Src
Authors:Grutter, C, Kluter, S, Rauh, D.
Deposit date:2009-02-05
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hybrid compound design to overcome the gatekeeper T338M mutation in cSrc
J.Med.Chem., 52, 2009
3FUR
DownloadVisualize
BU of 3fur by Molmil
Crystal Structure of PPARg in complex with INT131
Descriptor: 2,4-dichloro-N-[3,5-dichloro-4-(quinolin-3-yloxy)phenyl]benzenesulfonamide, CHLORIDE ION, Nuclear receptor coactivator 1, ...
Authors:Wang, Z, Liu, J, Walker, N.
Deposit date:2009-01-14
Release date:2009-06-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:INT131: a selective modulator of PPAR gamma.
J.Mol.Biol., 386, 2009
3QGJ
DownloadVisualize
BU of 3qgj by Molmil
1.3A Structure of alpha-Lytic Protease Bound to Ac-AlaAlaPro-Alanal
Descriptor: 1,2-ETHANEDIOL, Ac-AlaAlaPro-Alanal peptide, Alpha-lytic protease, ...
Authors:Everill, P, Meinke, G, Bohm, A, Bachovchin, W.
Deposit date:2011-01-24
Release date:2012-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Substrate Binding Defines Ser195 Position in the Catalytic Triad of Serine Proteases, Not His57 protonation
To be Published
3G84
DownloadVisualize
BU of 3g84 by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of R343V mutant of human surfactant protein D in complex with alpha 1,2 dimannose.
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Head, J.F.
Deposit date:2009-02-11
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343.
Biochemistry, 48, 2009
3QO1
DownloadVisualize
BU of 3qo1 by Molmil
Monoclinic form of IgG1 Fab fragment (apo form) sharing same Fv as IgA
Descriptor: Fab fragment of IMMUNOGLOBULIN G1 HEAVY CHAIN, Fab fragment of IMMUNOGLOBULIN G1 LIGHT CHAIN, GLYCEROL
Authors:Trajtenberg, F, Correa, A, Buschiazzo, A.
Deposit date:2011-02-09
Release date:2012-02-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a human IgA1 Fab fragment at 1.55 angstrom resolution: potential effect of the constant domains on antigen-affinity modulation
Acta Crystallogr.,Sect.D, 69, 2013
3QPN
DownloadVisualize
BU of 3qpn by Molmil
Structure of PDE10-inhibitor complex
Descriptor: 6-methoxy-7-[2-(quinolin-2-yl)ethoxy]quinazoline, MAGNESIUM ION, SULFATE ION, ...
Authors:Pandit, J, Marr, E.S.
Deposit date:2011-02-14
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Use of Structure-Based Design to Discover a Potent, Selective, In Vivo Active Phosphodiesterase 10A Inhibitor Lead Series for the Treatment of Schizophrenia.
J.Med.Chem., 54, 2011
3QH7
DownloadVisualize
BU of 3qh7 by Molmil
2.5 A resolution structure of Se-Met labeled CT296 from Chlamydia trachomatis
Descriptor: CT296
Authors:Kemege, K, Hickey, J, Lovell, S, Battaile, K.P, Zhang, Y, Hefty, P.S.
Deposit date:2011-01-25
Release date:2011-10-05
Last modified:2018-10-10
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Ab initio structural modeling of and experimental validation for Chlamydia trachomatis protein CT296 reveal structural similarity to Fe(II) 2-oxoglutarate-dependent enzymes.
J. Bacteriol., 193, 2011
3FVQ
DownloadVisualize
BU of 3fvq by Molmil
Crystal structure of the nucleotide binding domain FbpC complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Fe(3+) ions import ATP-binding protein fbpC
Authors:Newstead, S, Bilton, P, Carpenter, E.P, Campopiano, D, Iwata, S.
Deposit date:2009-01-16
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into how nucleotide-binding domains power ABC transport.
Structure, 17, 2009
3QHX
DownloadVisualize
BU of 3qhx by Molmil
Crystal Structure of Cystathionine gamma-synthase MetB (Cgs) from Mycobacterium ulcerans Agy99 bound to HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cystathionine gamma-synthase MetB (Cgs), GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-01-26
Release date:2011-03-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the cystathionine [gamma]-synthase MetB from Mycobacterium ulcerans
Acta Crystallogr.,Sect.F, 67, 2011
3QR9
DownloadVisualize
BU of 3qr9 by Molmil
Anthranilate phosphoribosyltransferase (trpD) from Mycobacterium tuberculosis (apo structure)
Descriptor: Anthranilate phosphoribosyltransferase, GLYCEROL
Authors:Castell, A, Short, F.L, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2011-02-17
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The Substrate Capture Mechanism of Mycobacterium tuberculosis Anthranilate Phosphoribosyltransferase Provides a Mode for Inhibition.
Biochemistry, 52, 2013
3FX0
DownloadVisualize
BU of 3fx0 by Molmil
Crystal structure of Human NEMO CC2_LZ domain
Descriptor: NF-kappa-B essential modulator
Authors:Lo, Y.C, Lin, S.C, Wu, H.
Deposit date:2009-01-19
Release date:2009-04-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for recognition of diubiquitins by NEMO.
Mol.Cell, 33, 2009
3QIX
DownloadVisualize
BU of 3qix by Molmil
Crystal Structure of BoNT/A LC with Zinc bound
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin type A, ZINC ION
Authors:Thompson, A.A, Han, G.W, Stevens, R.C.
Deposit date:2011-01-28
Release date:2011-04-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.413 Å)
Cite:Structural Characterization of Three Novel Hydroxamate-Based Zinc Chelating Inhibitors of the Clostridium botulinum Serotype A Neurotoxin Light Chain Metalloprotease Reveals a Compact Binding Site Resulting from 60/70 Loop Flexibility.
Biochemistry, 50, 2011
3GAH
DownloadVisualize
BU of 3gah by Molmil
Structure of a F112H variant PduO-type ATP:corrinoid adenosyltransferase from Lactobacillus reuteri complexed with cobalamin and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, COBALAMIN, Cobalamin adenosyltransferase PduO-like protein, ...
Authors:St Maurice, M, Mera, P.E, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2009-02-17
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Residue Phe112 of the human-type corrinoid adenosyltransferase (PduO) enzyme of Lactobacillus reuteri is critical to the formation of the four-coordinate Co(II) corrinoid substrate and to the activity of the enzyme.
Biochemistry, 48, 2009
3QSI
DownloadVisualize
BU of 3qsi by Molmil
Nickel binding domain of NikR from Helicobacter pylori disclosing partial metal occupancy
Descriptor: NICKEL (II) ION, NikR nickel-responsive regulator, SULFATE ION
Authors:Gonzalez, J.M, Pozharski, E.
Deposit date:2011-02-21
Release date:2012-04-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Ni(II) coordination to mixed sites modulates DNA binding of HpNikR via a long-range effect.
Proc.Natl.Acad.Sci.USA, 109, 2012
3QU1
DownloadVisualize
BU of 3qu1 by Molmil
Peptide deformylase from Vibrio cholerae
Descriptor: CHLORIDE ION, Peptide deformylase 2, SULFATE ION, ...
Authors:Osipiuk, J, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-02-23
Release date:2011-03-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Peptide deformylase from Vibrio cholerae.
To be Published
3QK7
DownloadVisualize
BU of 3qk7 by Molmil
Crystal structure of putative Transcriptional regulator from Yersinia pestis biovar Microtus str. 91001
Descriptor: Transcriptional regulators
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-01-31
Release date:2011-02-09
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of putative Transcriptional regulator from Yersinia pestis biovar Microtus str. 91001
To be Published
3GCN
DownloadVisualize
BU of 3gcn by Molmil
Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF)
Descriptor: Protease degS, YQF peptide
Authors:Sohn, J, Sauer, R.T, Grant, R.A.
Deposit date:2009-02-22
Release date:2009-03-31
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Mechanisms of allosteric activation of the DegS protease by OMP-peptide binding and protein-substrate binding
To be Published
3QUF
DownloadVisualize
BU of 3quf by Molmil
The structure of a family 1 extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
Descriptor: ACETIC ACID, Extracellular solute-binding protein, family 1, ...
Authors:Cuff, M.E, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-23
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The structure of a family 1 extracellular solute-binding protein from Bifidobacterium longum subsp. infantis
TO BE PUBLISHED
3FYM
DownloadVisualize
BU of 3fym by Molmil
The 1A structure of YmfM, a putative DNA-binding membrane protein from Staphylococcus aureus
Descriptor: Putative uncharacterized protein, ZINC ION
Authors:Xu, L, Sedelnikova, S.E, Baker, P.J, Rice, D.W.
Deposit date:2009-01-22
Release date:2010-02-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:The 1A structure of YmfM, a putative DNA-binding membrane protein from Staphylococcus aureus
To be Published
3QL2
DownloadVisualize
BU of 3ql2 by Molmil
Crystal Structure of Ribonuclease A Variant A4C/D83E/V118C
Descriptor: Ribonuclease pancreatic, SULFATE ION
Authors:Arnold, U, Schoepfel, M.
Deposit date:2011-02-02
Release date:2012-02-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Significant stabilization of ribonuclease A by additive effects
Febs J., 279, 2012
3QV2
DownloadVisualize
BU of 3qv2 by Molmil
Structure Analysis of Entamoeba histolytica methyltransferase EhMeth
Descriptor: 5-cytosine DNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
Authors:Schulz, E.C, Roth, H.M, Ankri, S, Ficner, R.
Deposit date:2011-02-25
Release date:2012-04-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure Analysis of Entamoeba histolytica Methyltransferase
To be Published
3FZI
DownloadVisualize
BU of 3fzi by Molmil
1.9 Angstrom structure of the thermophilic exonuclease III homologue Mth0212
Descriptor: Exodeoxyribonuclease, MAGNESIUM ION
Authors:Lakomek, K, Dickmanns, A, Ficner, R.
Deposit date:2009-01-26
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon