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2AT6
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BU of 2at6 by Molmil
1.22 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus Containing Fe(III) Deuteroporphyrin IX Complexed With Water at pH 5.6
Descriptor: FE(III) DEUTEROPORPHYRIN IX, Nitrophorin 4
Authors:Amoia, A.M, Montfort, W.R.
Deposit date:2005-08-24
Release date:2006-08-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Heme distortion in nitrophorin 4: high resolution structures of mutated positions L123V and L133V and heme altered proteins
To be Published
1QVF
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BU of 1qvf by Molmil
Structure of a deacylated tRNA minihelix bound to the E site of the large ribosomal subunit of Haloarcula marismortui
Descriptor: 23S ribosomal rna, 50S RIBOSOMAL PROTEIN L10E, 50S ribosomal protein L13P, ...
Authors:Schmeing, T.M, Moore, P.B, Steitz, T.A.
Deposit date:2003-08-27
Release date:2003-11-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit
RNA, 9, 2003
2BAN
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BU of 2ban by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) in complex with JANSSEN-R157208
Descriptor: 5-ETHYL-3-[(2-METHOXYETHYL)METHYLAMINO]-6-METHYL-4-(3-METHYLBENZYL)PYRIDIN-2(1H)-ONE, MANGANESE (II) ION, Reverse transcriptase P51 subunit, ...
Authors:Das, K, Arnold, E.
Deposit date:2005-10-14
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structures for HIV-1 Reverse Transcriptase in Complexes with Three Pyridinone Derivatives: A New Class of Non-Nucleoside Inhibitors Effective against a Broad Range of Drug-Resistant Strains.
J.Med.Chem., 48, 2005
3LT5
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BU of 3lt5 by Molmil
X-ray Crystallographic structure of a Pseudomonas Aeruginosa Azoreductase in complex with balsalazide
Descriptor: (3E)-3-({4-[(2-carboxyethyl)carbamoyl]phenyl}hydrazono)-6-oxocyclohexa-1,4-diene-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, FMN-dependent NADH-azoreductase 1, ...
Authors:Ryan, A, Laurieri, N, Westwood, I, Wang, C.-J, Lowe, E, Sim, E.
Deposit date:2010-02-15
Release date:2010-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Novel Mechanism for Azoreduction
J.Mol.Biol., 400, 2010
1QBF
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BU of 1qbf by Molmil
NMR SOLUTION STRUCTURE OF PORCINE PEPTIDE YY
Descriptor: PEPTIDE YY
Authors:Keire, D.A, Kobayashi, M, Solomon, T.E, Reeve Jr, J.R.
Deposit date:1999-04-16
Release date:2000-08-16
Last modified:2019-11-13
Method:SOLUTION NMR
Cite:Solution structure of monomeric peptide YY supports the functional significance of the PP-fold.
Biochemistry, 39, 2000
7ASS
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BU of 7ass by Molmil
OXA-48_L67F_CAZ. What Doesnt Kill You Makes You Stronger: Sub-MIC Selection Drives Cryptic Evolution of OXA-48
Descriptor: Beta-lactamase, CHLORIDE ION, hydrolyzed ceftazidime
Authors:Frohlich, C, Leiros, H.-K.S.
Deposit date:2020-10-28
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Cryptic beta-Lactamase Evolution Is Driven by Low beta-Lactam Concentrations.
Msphere, 6, 2021
7AHL
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BU of 7ahl by Molmil
ALPHA-HEMOLYSIN FROM STAPHYLOCOCCUS AUREUS
Descriptor: ALPHA-HEMOLYSIN
Authors:Song, L, Hobaugh, M, Shustak, C, Cheley, S, Bayley, H, Gouaux, J.E.
Deposit date:1996-12-02
Release date:1998-01-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore.
Science, 274, 1996
7AQO
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BU of 7aqo by Molmil
yeast THO-Sub2 complex dimer
Descriptor: BJ4_G0025130.mRNA.1.CDS.1, EM14S01-3B_G0007820.mRNA.1.CDS.1, TEX1 isoform 1, ...
Authors:Schuller, S.K, Schuller, J.M, Prabu, R.J, Baumgartner, M, Bonneau, F, basquin, J, Conti, E.
Deposit date:2020-10-22
Release date:2020-12-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structural insights into the nucleic acid remodeling mechanisms of the yeast THO-Sub2 complex.
Elife, 9, 2020
2B9A
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BU of 2b9a by Molmil
Human transthyretin (TTR) complexed with diflunisal analogues- TTR.3',5'-difluorobiphenyl-4-carboxylic acid
Descriptor: 3',5'-DIFLUOROBIPHENYL-4-CARBOXYLIC ACID, Transthyretin
Authors:Palaninathan, S.K, Kelly, J.W, Sacchettini, J.C.
Deposit date:2005-10-11
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Diflunisal Analogues Stabilize the Native State of Transthyretin. Potent Inhibition of Amyloidogenesis.
J.Med.Chem., 47, 2004
3LL8
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BU of 3ll8 by Molmil
Crystal Structure of Calcineurin in Complex with AKAP79 Peptide
Descriptor: AKAP79 peptide, CALCIUM ION, Calcineurin subunit B type 1, ...
Authors:Li, H, Hogan, P.G.
Deposit date:2010-01-28
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Balanced interactions of calcineurin with AKAP79 regulate Ca(2+)-calcineurin-NFAT signaling.
Nat.Struct.Mol.Biol., 19, 2012
1QHQ
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BU of 1qhq by Molmil
AURACYANIN, A BLUE COPPER PROTEIN FROM THE GREEN THERMOPHILIC PHOTOSYNTHETIC BACTERIUM CHLOROFLEXUS AURANTIACUS
Descriptor: CHLORIDE ION, COPPER (II) ION, PROTEIN (AURACYANIN), ...
Authors:Bond, C.S, Blankenship, R.E, Freeman, H.C, Guss, J.M, Maher, M, Selvaraj, F, Wilce, M.C.J, Willingham, K.
Deposit date:1999-05-25
Release date:2001-03-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of auracyanin, a "blue" copper protein from the green thermophilic photosynthetic bacterium Chloroflexus aurantiacus.
J.Mol.Biol., 306, 2001
1R0A
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BU of 1r0a by Molmil
Crystal structure of HIV-1 reverse transcriptase covalently tethered to DNA template-primer solved to 2.8 angstroms
Descriptor: 5'-D(*A*TP*GP*CP*AP*TP*CP*GP*GP*CP*GP*CP*TP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*GP*GP*T)-3', 5'-D(*C*CP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*AP*GP*CP*GP*CP*CP*GP*(2DA))-3', GLYCEROL, ...
Authors:Tuske, S, Ding, J, Arnold, E.
Deposit date:2003-09-19
Release date:2004-08-03
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nonnucleoside inhibitor binding affects the interactions of the fingers subdomain of human immunodeficiency virus type 1 reverse transcriptase with DNA.
J.Virol., 78, 2004
2B23
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BU of 2b23 by Molmil
Human estrogen receptor alpha ligand-binding domain and a glucocorticoid receptor-interacting protein 1 NR box II peptide
Descriptor: Estrogen receptor, Nuclear receptor coactivator 2
Authors:Rajan, S.S, Hsieh, R.W, Sharma, S.K, Greene, G.L.
Deposit date:2005-09-16
Release date:2006-09-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NFkappaB selectivity of estrogen receptor ligands revealed by comparative crystallographic analyses
Nat.Chem.Biol., 4, 2008
1QYF
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BU of 1qyf by Molmil
Crystal structure of matured green fluorescent protein R96A variant
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, green-fluorescent protein
Authors:Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2003-09-10
Release date:2003-09-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures.
Proc.Natl.Acad.Sci.Usa, 100, 2003
3LO8
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BU of 3lo8 by Molmil
Crystal Structure of The Oxidized Form of Ferredoxin:NADP+ Reductase From Maize Root at 1.05 Angstroms
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, SODIUM ION
Authors:Faber, H.R, Karplus, P.A.
Deposit date:2010-02-03
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Using a conformation-dependent stereochemical library improves crystallographic refinement of proteins.
Acta Crystallogr.,Sect.D, 66, 2010
3LD0
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BU of 3ld0 by Molmil
Crystal structure of B.licheniformis Anti-TRAP protein, an antagonist of TRAP-RNA interactions
Descriptor: Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA, MAGNESIUM ION, ...
Authors:Shevtsov, M.B, Chen, Y, Isupov, M.N, Gollnick, P, Antson, A.A.
Deposit date:2010-01-12
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bacillus licheniformis Anti-TRAP can assemble into two types of dodecameric particles with the same symmetry but inverted orientation of trimers.
J.Struct.Biol., 170, 2010
7APK
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BU of 7apk by Molmil
Structure of the human THO - UAP56 complex
Descriptor: Spliceosome RNA helicase DDX39B, THO complex subunit 1, THO complex subunit 2, ...
Authors:Hohmann, U, Puehringer, T, Plaschka, C.
Deposit date:2020-10-17
Release date:2020-12-16
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of the human core transcription-export complex reveals a hub for multivalent interactions.
Elife, 9, 2020
1YTM
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BU of 1ytm by Molmil
Crystal structure of phosphoenolpyruvate carboxykinase of Anaerobiospirillum succiniciproducens complexed with ATP, oxalate, magnesium and manganese ions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Delbaere, L.T.J, Cotelesage, J.J.H.
Deposit date:2005-02-10
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Anaerobiospirillum succiniciproducens PEP carboxykinase reveals an important active site loop
Int.J.Biochem.Cell Biol., 37, 2005
1QZY
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BU of 1qzy by Molmil
Human Methionine Aminopeptidase in complex with bengamide inhibitor LAF153 and cobalt
Descriptor: (E)-(2R,3R,4S,5R)-3,4,5-TRIHYDROXY-2-METHOXY-8,8-DIMETHYL-NON-6-ENOIC ACID ((3S,6R)-6-HYDROXY-2-OXO-AZEPAN-3-YL)-AMIDE, COBALT (II) ION, Methionine aminopeptidase 2, ...
Authors:Eck, M.J, Song, H.K, Morollo, A.
Deposit date:2003-09-18
Release date:2003-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Proteomics-based target identification: bengamides as a new class of methionine aminopeptidase inhibitors.
J.Biol.Chem., 278, 2003
3LKT
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BU of 3lkt by Molmil
Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Lipscomb, J.D, Purpero, V.M.
Deposit date:2010-01-27
Release date:2011-02-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Tyrosine 447 of Protocatechuate 3,4-Dioxygenase Controls Efficient Progress Through Catalysis
To be Published
7B7N
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BU of 7b7n by Molmil
Human herpesvirus-8 gH/gL in complex with EphA2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Pederzoli, R, Guardado-Calvo, P, Rey, F.A, Backovic, M.
Deposit date:2020-12-11
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Human herpesvirus 8 molecular mimicry of ephrin ligands facilitates cell entry and triggers EphA2 signaling.
Plos Biol., 19, 2021
1YRX
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BU of 1yrx by Molmil
Structure of a novel photoreceptor: the BLUF domain of AppA from Rhodobacter sphaeroides
Descriptor: FLAVIN MONONUCLEOTIDE, N-DODECYL-N,N-DIMETHYLGLYCINATE, hypothetical protein Rsph03001874
Authors:Anderson, S, Dragnea, V, Masuda, S, Ybe, J, Moffat, K, Bauer, C.
Deposit date:2005-02-05
Release date:2005-06-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a Novel Photoreceptor, the BLUF Domain of AppA from Rhodobacter sphaeroides
Biochemistry, 44, 2005
1YNJ
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BU of 1ynj by Molmil
Taq RNA polymerase-Sorangicin complex
Descriptor: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Campbell, E.A, Pavlova, O, Zenkin, N, Leon, F, Irschik, H, Jansen, R, Severinov, K, Darst, S.A.
Deposit date:2005-01-24
Release date:2005-03-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase
Embo J., 24, 2005
7B5L
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BU of 7b5l by Molmil
Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: NEDD8-CUL1-RBX1-SKP1-SKP2-CKSHS1-Cyclin A-CDK2-p27-UBE2L3~Ub~ARIH1. Transition State 1
Descriptor: 5-azanylpentan-2-one, Cullin-1, Cyclin-A2, ...
Authors:Horn-Ghetko, D, Prabu, J.R, Schulman, B.A.
Deposit date:2020-12-04
Release date:2021-02-10
Last modified:2021-03-10
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly.
Nature, 590, 2021
3LPE
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BU of 3lpe by Molmil
Crystal structure of Spt4/5NGN heterodimer complex from Methanococcus jannaschii
Descriptor: DNA-directed RNA polymerase subunit E'', Putative transcription antitermination protein nusG, ZINC ION
Authors:Hirtreiter, A, Damsma, G.E, Cheung, A.C.M, Klose, D, Grohmann, D, Vojnic, E, Martin, A.C.R, Cramer, P, Werner, F.
Deposit date:2010-02-05
Release date:2010-03-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif.
Nucleic Acids Res., 38, 2010

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