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4K0V
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BU of 4k0v by Molmil
Structural basis for angiopoietin-1 mediated signaling initiation
Descriptor: Angiopoietin-1, TEK tyrosine kinase variant
Authors:Yu, X, Seegar, T.C.M, Dalton, A.C, Tzvetkova-Robev, D, Goldgur, Y, Nikolov, D.B, Barton, W.A.
Deposit date:2013-04-04
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (4.51 Å)
Cite:Structural basis for angiopoietin-1-mediated signaling initiation.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K2G
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BU of 4k2g by Molmil
Structure of Pseudomonas aeruginosa PvdQ bound to BRD-A33442372
Descriptor: (2S)-(4-fluorophenyl)[6-(trifluoromethyl)pyridin-2-yl]ethanenitrile, 1,2-ETHANEDIOL, Acyl-homoserine lactone acylase PvdQ
Authors:Drake, E.J, Wurst, J.M, Theriault, J.R, Munoz, B, Gulick, A.M.
Deposit date:2013-04-09
Release date:2014-06-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Identification of Inhibitors of PvdQ, an Enzyme Involved in the Synthesis of the Siderophore Pyoverdine.
Acs Chem.Biol., 9, 2014
4K1E
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BU of 4k1e by Molmil
Atomic resolution crystal structures of Kallikrein-Related Peptidase 4 complexed with a modified SFTI inhibitor FCQR
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Kallikrein-4, LITHIUM ION, ...
Authors:Ilyichova, O.V, Swedberg, J.E, de Veer, S.J, Sit, K.C, Harris, J.M, Buckle, A.M.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Direct and indirect mechanisms of KLK4 inhibition revealed by structure and dynamics
Sci Rep, 6, 2016
4K2P
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BU of 4k2p by Molmil
The Structure of a Quintuple Mutant of the Tiam1 PH-CC-Ex Domain
Descriptor: CALCIUM ION, T-lymphoma invasion and metastasis-inducing protein 1
Authors:Joshi, M, Gakhar, L, Fuentes, E.J.
Deposit date:2013-04-09
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:High-resolution structure of the Tiam1 PHn-CC-Ex domain.
Acta Crystallogr.,Sect.F, 69, 2013
4K3H
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BU of 4k3h by Molmil
Immunoglobulin lambda variable domain L5(L89S) fluorogen activationg protein in complex with malachite green
Descriptor: 4-{bis[4-(dimethylamino)phenyl]methyl}phenol, GLYCEROL, Immunoglobulin lambda variable domain L5(L89S), ...
Authors:Stanfield, R.L, Szent-Gyorgyi, C, Wilson, I.A.
Deposit date:2013-04-10
Release date:2013-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Malachite Green Mediates Homodimerization of Antibody VL Domains to Form a Fluorescent Ternary Complex with Singular Symmetric Interfaces.
J.Mol.Biol., 425, 2013
8ZKC
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BU of 8zkc by Molmil
iron-sulfur cluster transfer protein ApbC
Descriptor: GLYCEROL, Iron-sulfur cluster carrier protein, MAGNESIUM ION
Authors:Yang, J, Liu, L.
Deposit date:2024-05-16
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the iron-sulfur cluster transfer protein ApbC from Escherichia coli.
Biochem.Biophys.Res.Commun., 722, 2024
7BCB
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BU of 7bcb by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to IR3 DNA
Descriptor: DNA (5'-D(*TP*AP*AP*TP*GP*TP*CP*AP*AP*AP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*TP*TP*TP*GP*AP*CP*AP*TP*TP*A)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-19
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
4JZ7
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BU of 4jz7 by Molmil
Carbamate kinase from Giardia lamblia bound to AMP-PNP
Descriptor: Carbamate kinase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Lim, K, Herzberg, O.
Deposit date:2013-04-02
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of Carbamate Kinase from Giardia lamblia Bound with Citric Acid and AMP-PNP.
Plos One, 8, 2013
7BNX
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BU of 7bnx by Molmil
Archeal holliday junction resolvase from Thermus thermophilus phage 15-6
Descriptor: Holliday junction resolvase, SULFATE ION
Authors:Hakansson, M, Ahlqvist, J, Linares Pasten, J.A, Jasilionis, A, Nordberg Karlsson, E, Al-Karadaghi, S.
Deposit date:2021-01-22
Release date:2022-02-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Crystal structure and initial characterization of a novel archaeal-like Holliday junction-resolving enzyme from Thermus thermophilus phage Tth15-6.
Acta Crystallogr D Struct Biol, 78, 2022
9AYW
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BU of 9ayw by Molmil
SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhang, Q.E, Acharya, P.
Deposit date:2024-03-08
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:SARS-CoV-2 Omicron-EG.5.1 3-RBD down Spike Protein Trimer 1 (S-GSAS-Omicron-EG.5.1)
To Be Published
7BBN
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BU of 7bbn by Molmil
Crystal structure of an ancient sequence-reconstructed Elongation Factor Tu (node 317)
Descriptor: Elongation Factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Majumdar, S, Bergfors, T, Sanyal, S.
Deposit date:2020-12-18
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of an ancient sequence-reconstructed Elongation factor Tu (node 317)
To be published
7BGS
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BU of 7bgs by Molmil
Archeal holliday junction resolvase from Thermus thermophilus phage 15-6
Descriptor: Holliday junction resolvase, SULFATE ION
Authors:Hakansson, M, Ahlqvist, J, Linares Pasten, J.A, Jasilionis, A, Nordberg Karlsson, E, Al-Karadaghi, S.
Deposit date:2021-01-08
Release date:2022-01-19
Last modified:2022-02-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and initial characterization of a novel archaeal-like Holliday junction-resolving enzyme from Thermus thermophilus phage Tth15-6.
Acta Crystallogr D Struct Biol, 78, 2022
9F7X
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BU of 9f7x by Molmil
Human PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol B (BPB)
Descriptor: Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, bisphenol-B
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
8Z5L
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BU of 8z5l by Molmil
Crystal structure of metallo-beta-lactamse, IMP-1, complexed with a quinolinone-based inhibitor
Descriptor: 3-[2-azanyl-5-[2-cyclohexylethyl-[3-(4-methylphenoxy)propyl]amino]phenyl]propanoic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Kamo, T, Kuroda, K, Nimura, S, Guo, Y, Kondo, S, Nukaga, M, Hoshino, T.
Deposit date:2024-04-18
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Development of Inhibitory Compounds for Metallo-beta-lactamase through Computational Design and Crystallographic Analysis.
Biochemistry, 63, 2024
4K4O
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BU of 4k4o by Molmil
The DNA Gyrase B ATP binding domain of Enterococcus faecalis in complex with a small molecule inhibitor
Descriptor: 6-fluoro-4-[(3aR,6aR)-hexahydropyrrolo[3,4-b]pyrrol-5(1H)-yl]-N-methyl-2-[(2-methylpyrimidin-5-yl)oxy]-9H-pyrimido[4,5-b]indol-8-amine, DNA gyrase subunit B, TERTIARY-BUTYL ALCOHOL
Authors:Bensen, D.C, Akers-Rodriguez, S, Lam, T, Tari, L.W.
Deposit date:2013-04-12
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:A new class of type IIA topoisomerase inhibitors with broad-spectrum antibacterial activity
To be Published
9F7W
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BU of 9f7w by Molmil
Humman PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol A (BPA)
Descriptor: 4,4'-PROPANE-2,2-DIYLDIPHENOL, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
4K5K
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BU of 4k5k by Molmil
Structure of bovine endothelial nitric oxide synthase heme domain in complex with ((2S, 3S)-1,3-bis((6-(2,5-dimethyl-1H-pyrrol-1-yl)-4-methylpyridin-2-yl)methoxy)-2-aminobutane
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 6,6'-{[(2S,3S)-2-aminobutane-1,3-diyl]bis(oxymethanediyl)}bis(4-methylpyridin-2-amine), ACETATE ION, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2013-04-14
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chiral linkers to improve selectivity of double-headed neuronal nitric oxide synthase inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4K1Q
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BU of 4k1q by Molmil
Structure of hCAIX mimic (hCAII with 5 mutations in active site)
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Biswas, S, McKenna, R.
Deposit date:2013-04-05
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.699 Å)
Cite:Developing isoform specific inhibitors for hCAIX using CAIX mimic
To be Published
8Y22
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BU of 8y22 by Molmil
FGFR1 kinase domain with a covalent inhibitor 9g
Descriptor: Fibroblast growth factor receptor 1, SULFATE ION, ~{N}-[4-[[4-azanyl-3-(7-methoxy-5-methyl-1-benzothiophen-2-yl)pyrazolo[3,4-d]pyrimidin-1-yl]methyl]phenyl]propanamide
Authors:Chen, X.J, Chen, Y.H.
Deposit date:2024-01-25
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.792 Å)
Cite:Design, synthesis and biological evaluation of 5-amino-1H-pyrazole-4-carboxamide derivatives as pan-FGFR covalent inhibitors.
Eur.J.Med.Chem., 275, 2024
4K33
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BU of 4k33 by Molmil
Crystal Structure of FGF Receptor 3 (FGFR3) Kinase Domain Harboring the K650E Mutation, a Gain-of-Function Mutation Responsible for Thanatophoric Dysplasia Type II and Spermatocytic Seminoma
Descriptor: Fibroblast growth factor receptor 3, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
Authors:Huang, Z, Chen, H, Mohammadi, M.
Deposit date:2013-04-10
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3405 Å)
Cite:Structural Mimicry of A-Loop Tyrosine Phosphorylation by a Pathogenic FGF Receptor 3 Mutation.
Structure, 21, 2013
9ERY
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BU of 9ery by Molmil
Co-crystal strucutre of PD-L1 with low molecular weight inhibitor
Descriptor: 5-[[5-[[2-[bis(fluoranyl)methyl]-3-(2,3-dihydro-1,4-benzodioxin-6-yl)phenyl]methoxy]-2-[(2-hydroxyethylamino)methyl]phenoxy]methyl]pyridine-3-carbonitrile, Programmed cell death 1 ligand 1, SULFATE ION
Authors:Plewka, J, Magiera-Mularz, K, Zhang, W.
Deposit date:2024-03-25
Release date:2024-07-24
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Design, synthesis, and evaluation of antitumor activity of 2-arylmethoxy-4-(2-fluoromethyl-biphenyl-3-ylmethoxy) benzylamine derivatives as PD-1/PD-l1 inhibitors.
Eur.J.Med.Chem., 276, 2024
4K3D
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BU of 4k3d by Molmil
Crystal structure of bovine antibody BLV1H12 with ultralong CDR H3
Descriptor: BOVINE ANTIBODY WITH ULTRALONG CDR H3, HEAVY CHAIN, LIGHT CHAIN, ...
Authors:Ekiert, D.C, Wang, F, Wilson, I.A.
Deposit date:2013-04-10
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reshaping antibody diversity.
Cell(Cambridge,Mass.), 153, 2013
9BP6
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BU of 9bp6 by Molmil
Structure of alpha1B and betaI/IVb microtubule bound to GMPCPP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Zehr, E.A, Roll-Mecak, A.
Deposit date:2024-05-07
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human alpha 1B/ beta I+ beta IVb microtubules shed light on isoform specific assembly
Biorxiv, 2023
4K4A
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BU of 4k4a by Molmil
X-ray crystal structure of E. coli YdiI complexed with phenacyl-CoA
Descriptor: Esterase YdiI, phenacyl coenzyme A
Authors:Ru, W, Farelli, J.D, Dunaway-Mariano, D, Allen, K.N.
Deposit date:2013-04-12
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structure and Catalysis in the Escherichia coli Hotdog-fold Thioesterase Paralogs YdiI and YbdB.
Biochemistry, 53, 2014
9BKS
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BU of 9bks by Molmil
Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Isoform 2 of E3 ubiquitin-protein ligase TRIP12
Authors:Kimani, S, Dong, A, Li, Y, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-04-29
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ADP
To be published

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PDB entries from 2024-08-14

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