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8AQR
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BU of 8aqr by Molmil
Native crystal structure of the N-terminal beta-hairpin docking (bHD) domain of the AerJ halogenase, from the aeruginosin biosynthetic assembly line
Descriptor: AerJ, CHLORIDE ION
Authors:Fage, C.D, Lewandowski, J.R, Challis, G.L.
Deposit date:2022-08-13
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Tandem halogenation and condensation in aeruginosin biosynthesis is directed by docking domain-mediated carrier protein recruitment
To Be Published
5U0B
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BU of 5u0b by Molmil
Structure of full-length Zika virus NS5
Descriptor: Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ...
Authors:Zhao, B, Du, F.
Deposit date:2016-11-23
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure and function of the Zika virus full-length NS5 protein.
Nat Commun, 8, 2017
7OUR
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BU of 7our by Molmil
Wilavidin apo form (P1 form)
Descriptor: wilavidin
Authors:Avraham, O, Livnah, O.
Deposit date:2021-06-13
Release date:2021-11-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Wilavidin - a novel member of the avidin family that forms unique biotin-binding hexamers.
Febs J., 289, 2022
8AQQ
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BU of 8aqq by Molmil
SeMet-derived crystal structure of the N-terminal beta-hairpin docking (bHD) domain of the AerJ halogenase, from the aeruginosin biosynthetic assembly line
Descriptor: AerJ, CHLORIDE ION
Authors:Fage, C.D, Lewandowski, J.R, Challis, G.L.
Deposit date:2022-08-13
Release date:2024-03-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Tandem halogenation and condensation in aeruginosin biosynthesis is directed by docking domain-mediated carrier protein recruitment
To Be Published
8ASF
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BU of 8asf by Molmil
Crystal structure of Thrombin in complex with macrocycle T1
Descriptor: 5-chloranyl-~{N}-[[(9~{S},15~{R})-8,14,17-tris(oxidanylidene)-3,20-dithia-7,13,16-triazatetracyclo[20.2.2.1^{5,7}.1^{9,13}]octacosa-1(25),22(26),23-trien-15-yl]methyl]thiophene-2-carboxamide, Thrombin heavy chain, Thrombin light chain
Authors:Chinellato, M, Angelini, A, Nielsen, A, Heinis, C, Cendron, L.
Deposit date:2022-08-19
Release date:2024-03-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of Thrombin in complex with optimized macrocycles T1 and T3
To Be Published
8K4W
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BU of 8k4w by Molmil
Structure of a triple-helix region of human collagen type I from Trautec
Descriptor: CHLORIDE ION, triple-helix region of human collagen type I
Authors:Chu, Y, Zhai, Y, Fan, X, Li, J, Wang, L, Fu, S, Feng, P, Qian, S.
Deposit date:2023-07-20
Release date:2023-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a triple-helix region of human collagen type I from Trautec.
To Be Published
5UG2
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BU of 5ug2 by Molmil
CcP gateless cavity
Descriptor: 6-fluoro-2-methylimidazo[1,2-a]pyridin-3-amine, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Stein, R.M, Fischer, M, Shoichet, B.K.
Deposit date:2017-01-06
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8JT3
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BU of 8jt3 by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Arg
Descriptor: (E)-N~2~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-arginine, ACETATE ION, CrmG, ...
Authors:Su, K, Zhang, Y, Xu, J, Liu, J.
Deposit date:2023-06-21
Release date:2023-08-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Co-crystal structure provides insights on transaminase CrmG recognition amino donor L-Arg.
Biochem.Biophys.Res.Commun., 675, 2023
5U19
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BU of 5u19 by Molmil
Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with (1R,2S,3S,4R,6R)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside
Descriptor: (1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-amino-2-deoxy-alpha-D-glucopyranoside, MAGNESIUM ION, Putative gentamicin methyltransferase, ...
Authors:Bury, P, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2016-11-28
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis.
ACS Chem. Biol., 12, 2017
8B0V
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BU of 8b0v by Molmil
Crystal structure of C-terminal domain of Pseudomonas aeruginosa LexA G91D mutant
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Vascon, F, De Felice, S, Chinellato, M, Maso, L, Cendron, L.
Deposit date:2022-09-08
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural investigations on the SOS response in Pseudomonas aeruginosa
To Be Published
5JYE
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BU of 5jye by Molmil
Structures of Streptococcus agalactiae GBS GAPDH in different enzymatic states
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Schormann, N, Chattopadhyay, D.
Deposit date:2016-05-13
Release date:2016-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes.
PLoS ONE, 11, 2016
5U1I
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BU of 5u1i by Molmil
Crystal structure of a methyltransferase involved in the biosynthesis of gentamicin in complex with the methylated Kanamycin B
Descriptor: (1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-3-(methylamino)-alpha-D-glucopyranosyl]oxy}-2-hydroxycyclohexyl 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranoside, CALCIUM ION, Putative gentamicin methyltransferase, ...
Authors:Bury, P, Huang, F, Leadlay, P, Dias, M.V.B.
Deposit date:2016-11-28
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.932 Å)
Cite:Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis.
ACS Chem. Biol., 12, 2017
5U1L
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BU of 5u1l by Molmil
Crystal structure of the ATP-gated P2X7 ion channel in the closed, apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, P2X purinoceptor
Authors:Karasawa, A, Kawate, T.
Deposit date:2016-11-28
Release date:2017-01-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for subtype-specific inhibition of the P2X7 receptor.
Elife, 5, 2016
7U6I
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BU of 7u6i by Molmil
HalB with glycine and succinate
Descriptor: GLYCEROL, GLYCINE, Halogenase B, ...
Authors:Neugebauer, M.E, Kissman, E.N, Chang, M.C.Y.
Deposit date:2022-03-04
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.
Proc.Natl.Acad.Sci.USA, 120, 2023
5DGJ
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BU of 5dgj by Molmil
1.0A resolution structure of Norovirus 3CL protease in complex an oxadiazole-based, cell permeable macrocyclic (20-mer) inhibitor
Descriptor: 3C-LIKE PROTEASE, tert-butyl [(4S,7S,10S)-7-(cyclohexylmethyl)-10-(hydroxymethyl)-5,8,13-trioxo-22-oxa-6,9,14,20,21-pentaazabicyclo[17.2.1]docosa-1(21),19-dien-4-yl]carbamate
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Damalanka, V.C, Kim, Y, Alliston, K.R, Weerawarna, P.M, Kankanamalage, A.C.G, Lushington, G.H, Chang, K.-O, Groutas, W.C.
Deposit date:2015-08-27
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1 Å)
Cite:Oxadiazole-Based Cell Permeable Macrocyclic Transition State Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 59, 2016
5JZM
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BU of 5jzm by Molmil
Structure of wild type Amidase from Vibrio cholerae 0395 at low temparature at 1.8 Angstroms resolution.
Descriptor: Intracellular protease/amidase
Authors:Chowdhury, S.R, Sen, U.
Deposit date:2016-05-17
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structure of wild type Amidase from Vibrio cholerae 0395 at high temparature at 1.8 Angstroms resolution.
To Be Published
7U6H
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BU of 7u6h by Molmil
HalD with ornithine and alpha-ketoglutarate
Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Swenson, C.V, Neugebauer, M.E, Kissman, E.N, Chang, M.C.Y.
Deposit date:2022-03-04
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biocatalytic control of site-selectivity and chain length-selectivity in radical amino acid halogenases.
Proc.Natl.Acad.Sci.USA, 120, 2023
7MO1
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BU of 7mo1 by Molmil
Crystal Structure of the ZnF1 of Nucleoporin NUP153 in complex with Ran-GDP
Descriptor: GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Dasso, M, Patke, A, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A.
Deposit date:2021-05-01
Release date:2022-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Architecture of the cytoplasmic face of the nuclear pore.
Science, 376, 2022
5TTO
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BU of 5tto by Molmil
X-ray crystal structure of PPARgamma in complex with SR1643
Descriptor: 4-bromo-N-{3,5-dichloro-4-[(quinolin-3-yl)oxy]phenyl}-2,5-difluorobenzene-1-sulfonamide, Peroxisome proliferator-activated receptor gamma
Authors:Bruning, J.B, Frkic, R.L, Griffin, P, Kamenecka, T, Abell, A.
Deposit date:2016-11-04
Release date:2017-05-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.246 Å)
Cite:Structure-Activity Relationship of 2,4-Dichloro-N-(3,5-dichloro-4-(quinolin-3-yloxy)phenyl)benzenesulfonamide (INT131) Analogs for PPAR gamma-Targeted Antidiabetics.
J. Med. Chem., 60, 2017
8AWR
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BU of 8awr by Molmil
Structure of recombinant human beta-glucocerebrosidase in complex with L-carbaxylosyl chloride
Descriptor: (1~{S},2~{R},3~{S},6~{S})-6-chloranylcyclohex-4-ene-1,2,3-triol, (1~{S},2~{S},3~{S},4~{R})-cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, ...
Authors:Rowland, R.J, Davies, G.J.
Deposit date:2022-08-30
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Single turnover covalent inhibitors for functional chaperoning of lysosomal glycoside hydrolases
To be published
7P47
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BU of 7p47 by Molmil
Structure of the E3 ligase Smc5/Nse2 in complex with Ubc9-SUMO thioester mimetic
Descriptor: E3 SUMO-protein ligase MMS21, SUMO-conjugating enzyme UBC9, Structural maintenance of chromosomes protein 5, ...
Authors:Lascorz, J, Varejao, N, Reverter, D.
Deposit date:2021-07-09
Release date:2021-11-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.314 Å)
Cite:Structural basis for the E3 ligase activity enhancement of yeast Nse2 by SUMO-interacting motifs.
Nat Commun, 12, 2021
7MNJ
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BU of 7mnj by Molmil
Crystal structure of the N-terminal domain of NUP358/RanBP2 (residues 145-673)
Descriptor: E3 SUMO-protein ligase RanBP2
Authors:Bley, C.J, Nie, S, Mobbs, G.W, Petrovic, S, Gres, A.T, Liu, X, Mukherjee, S, Harvey, S, Huber, F.M, Lin, D.H, Brown, B, Tang, A.W, Rundlet, E.J, Correia, A.R, Chen, S, Regmi, S.G, Stevens, T.A, Jette, C.A, Patke, A, Dasso, M, Palazzo, A.F, Kossiakoff, A.A, Hoelz, A.
Deposit date:2021-05-01
Release date:2022-06-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Architecture of the cytoplasmic face of the nuclear pore.
Science, 376, 2022
8AWK
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BU of 8awk by Molmil
Structure of recombinant human beta-glucocerebrosidase in complex with D-carbaxylosyl chloride
Descriptor: (2~{S},3~{S},4~{R})-cyclohex-5-ene-1,2,3,4-tetrol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rowland, R.J, Davies, G.J.
Deposit date:2022-08-30
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Single turnover covalent inhibitors for functional chaperoning of lysosomal glycoside hydrolases
To be published
5K29
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BU of 5k29 by Molmil
Trypanosoma brucei bromodomain BDF5 (Tb427tmp.01.5000)
Descriptor: UNKNOWN ATOM OR ION, uncharacterized protein BDF5
Authors:Lin, Y.H, Tempel, W, Walker, J.R, Loppnau, P, Amani, M, Hou, C.F.D, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2016-05-18
Release date:2016-07-13
Last modified:2016-11-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trypanosoma brucei bromodomain BDF5 (Tb427tmp.01.5000)
To Be Published
8AX3
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BU of 8ax3 by Molmil
Structure of recombinant human beta-glucocerebrosidase in complex with L-carbaxylosyl fluoride
Descriptor: (1~{S},2~{R},3~{S},6~{S})-6-fluoranylcyclohex-4-ene-1,2,3-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rowland, R.J, Davies, G.J.
Deposit date:2022-08-30
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Single turnover covalent inhibitors for functional chaperoning of lysosomal glycoside hydrolases
To be published

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