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6YD1
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BU of 6yd1 by Molmil
SaFtsZ-DFMBA
Descriptor: 2,6-difluoro-3-methoxybenzamide, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Fernandez-Tornero, C, Ruiz, F.M, Andreu, J.M.
Deposit date:2020-03-20
Release date:2021-07-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Targeting the FtsZ Allosteric Binding Site with a Novel Fluorescence Polarization Screen, Cytological and Structural Approaches for Antibacterial Discovery.
J.Med.Chem., 64, 2021
6YD6
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BU of 6yd6 by Molmil
SaFtsZ-UCM152 (comp.20)
Descriptor: 1,2-ETHANEDIOL, 1-methylpyrrolidin-2-one, 2,6-bis(fluoranyl)-3-[[3-(trifluoromethyl)phenyl]methoxy]benzamide, ...
Authors:Fernandez-Tornero, C, Ruiz, F.M, Andreu, J.M.
Deposit date:2020-03-20
Release date:2021-07-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Targeting the FtsZ Allosteric Binding Site with a Novel Fluorescence Polarization Screen, Cytological and Structural Approaches for Antibacterial Discovery.
J.Med.Chem., 64, 2021
6YD5
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BU of 6yd5 by Molmil
SaFtsZ-UCM151 (comp. 18)
Descriptor: 1,2-ETHANEDIOL, 1-methylpyrrolidin-2-one, 3-[(3-chlorophenyl)methoxy]-2,6-bis(fluoranyl)benzamide, ...
Authors:Fernandez-Tornero, C, Ruiz, F.M, Andreu, J.M.
Deposit date:2020-03-20
Release date:2021-07-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Targeting the FtsZ Allosteric Binding Site with a Novel Fluorescence Polarization Screen, Cytological and Structural Approaches for Antibacterial Discovery.
J.Med.Chem., 64, 2021
8CUL
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BU of 8cul by Molmil
Xray ray crystal structure of OXA-24/40 in complex with CR167
Descriptor: 3-({[(dihydroxyboranyl)methyl]sulfamoyl}methyl)benzoic acid, Beta-lactamase
Authors:Fernando, M.C, Wallar, B.J, Powers, R.A.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Sulfonamidoboronic Acids as "Cross-Class" Inhibitors of an Expanded-Spectrum Class C Cephalosporinase, ADC-33, and a Class D Carbapenemase, OXA-24/40: Strategic Compound Design to Combat Resistance in Acinetobacter baumannii .
Antibiotics, 12, 2023
8CUQ
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BU of 8cuq by Molmil
X-ray crystal structure of ADC-33 in complex with sulfonamidoboronic acid 6e
Descriptor: 3-[(4R)-4-ethyl-5,7,7-trihydroxy-2,2,7-trioxo-6-oxa-2lambda~6~-thia-3-aza-7lambda~5~-phospha-5-boraheptan-1-yl]benzoic acid, Beta-lactamase
Authors:Fernando, M.C, Wallar, B.J, Powers, R.A.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Sulfonamidoboronic Acids as "Cross-Class" Inhibitors of an Expanded-Spectrum Class C Cephalosporinase, ADC-33, and a Class D Carbapenemase, OXA-24/40: Strategic Compound Design to Combat Resistance in Acinetobacter baumannii .
Antibiotics, 12, 2023
8CUO
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BU of 8cuo by Molmil
X-ray crystal structure of OXA-24/40 in complex with sulfonamidoboronic acid 6e
Descriptor: 3-({[(1R)-1-boronopropyl]sulfamoyl}methyl)benzoic acid, Beta-lactamase, SULFATE ION
Authors:Fernando, M.C, Wallar, B.J, Powers, R.A.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Sulfonamidoboronic Acids as "Cross-Class" Inhibitors of an Expanded-Spectrum Class C Cephalosporinase, ADC-33, and a Class D Carbapenemase, OXA-24/40: Strategic Compound Design to Combat Resistance in Acinetobacter baumannii .
Antibiotics, 12, 2023
8CUP
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BU of 8cup by Molmil
X-ray crystal structure of ADC-33 in complex with sulfonamidoboronic acid 6d
Descriptor: 3-[(4S)-4-ethyl-5,7,7-trihydroxy-2,2,7-trioxo-6-oxa-2lambda~6~-thia-3-aza-7lambda~5~-phospha-5-boraheptan-1-yl]benzoic acid, Beta-lactamase
Authors:Fernando, M.C, Wallar, B.J, Powers, R.A.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Sulfonamidoboronic Acids as "Cross-Class" Inhibitors of an Expanded-Spectrum Class C Cephalosporinase, ADC-33, and a Class D Carbapenemase, OXA-24/40: Strategic Compound Design to Combat Resistance in Acinetobacter baumannii .
Antibiotics, 12, 2023
8CUM
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BU of 8cum by Molmil
X-ray crystal structure of OXA-24/40 in complex with sulfonamidoboronic acid 6d
Descriptor: 3-({[(1S)-1-boronopropyl]sulfamoyl}methyl)benzoic acid, Beta-lactamase, SULFATE ION
Authors:Fernando, M.C, Wallar, B.J, Powers, R.A.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Sulfonamidoboronic Acids as "Cross-Class" Inhibitors of an Expanded-Spectrum Class C Cephalosporinase, ADC-33, and a Class D Carbapenemase, OXA-24/40: Strategic Compound Design to Combat Resistance in Acinetobacter baumannii .
Antibiotics, 12, 2023
3OB8
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BU of 3ob8 by Molmil
Structure of the beta-galactosidase from Kluyveromyces lactis in complex with galactose
Descriptor: Beta-galactosidase, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Fernandez-Leiro, R, Pereira-Rodriguez, A, Becerra, M, Gonzalez-Siso, I, Cerdan, M.E, Sanz-Aparicio, J.
Deposit date:2010-08-06
Release date:2011-08-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of specificity in tetrameric Kluyveromyces lactis beta-galactosidase.
J.Struct.Biol., 177, 2012
3OBA
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BU of 3oba by Molmil
Structure of the beta-galactosidase from Kluyveromyces lactis
Descriptor: Beta-galactosidase, GLYCEROL, MANGANESE (III) ION
Authors:Fernandez-Leiro, R, Pereira-Rodriguez, A, Becerra, M, Gonzalez-Siso, I, Cerdan, M.E, Sanz-Aparicio, J.
Deposit date:2010-08-06
Release date:2011-08-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of specificity in tetrameric Kluyveromyces lactis beta-galactosidase.
J.Struct.Biol., 177, 2012
8TUC
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BU of 8tuc by Molmil
Unphosphorylated CaMKK2 in complex with CC-8977
Descriptor: (4M)-2-cyclopentyl-4-(7-ethoxyquinazolin-4-yl)benzoic acid, 1,2-ETHANEDIOL, Calcium/calmodulin-dependent protein kinase kinase 2, ...
Authors:Bernard, S.M, Shanmugasundaram, V, D'Agostino, L.
Deposit date:2023-08-16
Release date:2023-12-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of Small Molecule Inhibitors and Ligand Directed Degraders of Calcium/Calmodulin Dependent Protein Kinase Kinase 1 and 2 (CaMKK1/2).
J.Med.Chem., 66, 2023
8FAQ
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BU of 8faq by Molmil
Structure of Hemagglutinin from Influenza A/Victoria/22/2020
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
Authors:Hernandez Garcia, A, Lei, R.
Deposit date:2022-11-28
Release date:2024-06-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.035 Å)
Cite:Epistasis mediates the evolution of the receptor binding mode in recent human H3N2 hemagglutinin.
Nat Commun, 15, 2024
8FAW
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BU of 8faw by Molmil
Structure of Hemagglutinin from Influenza A/Victoria/22/2020 in complex with LSTC
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Hernandez Garcia, A, Lei, R.
Deposit date:2022-11-28
Release date:2024-06-19
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Epistasis mediates the evolution of the receptor binding mode in recent human H3N2 hemagglutinin.
Nat Commun, 15, 2024
2KZG
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BU of 2kzg by Molmil
A Transient and Low Populated Protein Folding Intermediate at Atomic Resolution
Descriptor: Pre-mRNA-processing factor 40 homolog A
Authors:Korzhnev, D.M, Religa, T.L, Banachewicz, W, Fersht, A.R, Kay, L.E.
Deposit date:2010-06-17
Release date:2010-09-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A transient and low-populated protein-folding intermediate at atomic resolution.
Science, 329, 2010
2VQ9
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BU of 2vq9 by Molmil
RNASE ZF-3E
Descriptor: CHLORIDE ION, RNASE 1
Authors:Kazakou, K, Holloway, D.E, Prior, S.H, Subramanian, V, Acharya, K.R.
Deposit date:2008-03-12
Release date:2008-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ribonuclease A Homologues of the Zebrafish: Polymorphism, Crystal Structures of Two Representatives and Their Evolutionary Implications
J.Mol.Biol., 380, 2008
2VQ8
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BU of 2vq8 by Molmil
RNASE ZF-1A
Descriptor: CHLORIDE ION, RNASE ZF-1A
Authors:Kazakou, K, Holloway, D.E, Prior, S.H, Subramanian, V, Acharya, K.R.
Deposit date:2008-03-12
Release date:2008-06-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Ribonuclease A Homologues of the Zebrafish: Polymorphism, Crystal Structures of Two Representatives and Their Evolutionary Implications.
J.Mol.Biol., 380, 2008
8UZD
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BU of 8uzd by Molmil
The structure of IpCS3, a theobromine methyltransferase from Yerba Mate
Descriptor: CAFFEINE, IpCS3, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hernandez Garcia, A, Nair, S.K.
Deposit date:2023-11-14
Release date:2024-01-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.721 Å)
Cite:Yerba mate (Ilex paraguariensis) genome provides new insights into convergent evolution of caffeine biosynthesis
To Be Published
2LKS
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BU of 2lks by Molmil
Ff11-60
Descriptor: Pre-mRNA-processing factor 40 homolog A
Authors:Barette, J, Velyvis, A, Religa, T.L, Korzhnev, D.M, Kay, L.E.
Deposit date:2011-10-19
Release date:2012-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cross-Validation of the Structure of a Transiently Formed and Low Populated FF Domain Folding Intermediate Determined by Relaxation Dispersion NMR and CS-Rosetta.
J.Phys.Chem.B, 116, 2012
2KPC
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BU of 2kpc by Molmil
Structure determination of the top-loop of the conserved 3 terminal secondary structure in the genome of YFV
Descriptor: RNA (5'-R(*UP*GP*AP*GP*CP*AP*CP*AP*GP*UP*UP*UP*GP*CP*UP*CP*A)-3')
Authors:Lescrinier, E, Dyubankova, N, Nauwelaerts, K, Jones, R, Herdewijn, P.
Deposit date:2009-10-12
Release date:2010-06-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure Determination of the Top-Loop of the Conserved 3'-Terminal Secondary Structure in the Genome of Flaviviruses.
Chembiochem, 11, 2010
2KPD
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BU of 2kpd by Molmil
Structure determination of the top-loop of the conserved 3 terminal secondary structure in the genome of YFV-mutant
Descriptor: RNA (5'-R(*UP*GP*AP*GP*CP*UP*CP*AP*GP*UP*UP*UP*GP*CP*UP*CP*A)-3')
Authors:Lescrinier, E, Dyubankova, N, Nauwelaerts, K, Jones, R, Herdewijn, P.
Deposit date:2009-10-12
Release date:2010-06-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure Determination of the Top-Loop of the Conserved 3'-Terminal Secondary Structure in the Genome of Flaviviruses.
Chembiochem, 11, 2010
8QH0
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BU of 8qh0 by Molmil
Crystal structure of the SARS-CoV-2 RBD with the antibody Cv2.3194
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cv2.3194 Heavy chain, GLYCEROL, ...
Authors:Fernandez, I, Rey, F.A.
Deposit date:2023-09-06
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:A broadly neutralizing antibody against SARS-CoV-2 Omicron variants
To Be Published
8QH1
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BU of 8qh1 by Molmil
Crystal structure of the SARS-CoV-2 RBD from the Omicron BA4 variant with the antibody Cv2.3194
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cv2.3194 heavy chain, IGK@ protein, ...
Authors:Fernandez, I, Rey, F.A.
Deposit date:2023-09-06
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Pan-neutralizing antibody isolated from a COVID patient
To Be Published
6W7P
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BU of 6w7p by Molmil
Crystal Structure Analysis of Space-grown Lysozyme - Ground experiment
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION
Authors:Fernandez, D, Russi, S.
Deposit date:2020-03-19
Release date:2020-04-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Protein structural changes on a CubeSat under rocket acceleration profile.
NPJ Microgravity, 6, 2020
6W8E
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BU of 6w8e by Molmil
Crystal Structure Analysis of Space-grown Lysozyme
Descriptor: CHLORIDE ION, Lysozyme
Authors:Fernandez, D, Russi, S.
Deposit date:2020-03-20
Release date:2020-04-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Protein structural changes on a CubeSat under rocket acceleration profile.
NPJ Microgravity, 6, 2020
6Y7A
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BU of 6y7a by Molmil
X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
Descriptor: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ...
Authors:Tarnawski, M, Johnsson, K, Hiblot, J.
Deposit date:2020-02-28
Release date:2021-03-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021

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PDB entries from 2024-10-16

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