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1NCF
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A NEW PARADIGM FOR TUMOR NECROSIS FACTOR SIGNALLING
Descriptor: TUMOR NECROSIS FACTOR RECEPTOR
Authors:Naismith, J.H, Sprang, S.R.
Deposit date:1994-10-12
Release date:1995-12-07
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic evidence for dimerization of unliganded tumor necrosis factor receptor.
J.Biol.Chem., 270, 1995
2A3F
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Crystal structure of nitrophorin 2 aqua complex
Descriptor: Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R.
Deposit date:2005-06-24
Release date:2006-06-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus.
To be Published
1QQY
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X-RAY CRYSTAL STRUCTURE ANALYSIS OF CANINE MILK LYSOZYME (APO-TYPE)
Descriptor: LYSOZYME C
Authors:Koshiba, T, Yao, M, Tanaka, I, Nitta, K.
Deposit date:1999-06-09
Release date:2000-06-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and thermodynamics of the extraordinarily stable molten globule state of canine milk lysozyme.
Biochemistry, 39, 2000
1P49
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BU of 1p49 by Molmil
Structure of Human Placental Estrone/DHEA Sulfatase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, PHOSPHATE ION, ...
Authors:Hernandez-Guzman, F.G, Higashiyama, T, Pangborn, W, Osawa, Y, Ghosh, D.
Deposit date:2003-04-21
Release date:2003-08-12
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Human Estrone Sulfatase Suggests Functional Roles of Membrane Association
J.Biol.Chem., 278, 2003
2ERP
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BU of 2erp by Molmil
Crystal structure of vascular apoptosis-inducing protein-1(inhibitor-bound form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, ...
Authors:Takeda, S, Igarashi, T, Araki, S.
Deposit date:2005-10-25
Release date:2006-06-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structures of VAP1 reveal ADAMs' MDC domain architecture and its unique C-shaped scaffold
Embo J., 25, 2006
1TCX
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HIV TRIPLE MUTANT PROTEASE COMPLEXED WITH INHIBITOR SB203386
Descriptor: (2R,4S,5S,1'S)-2-PHENYLMETHYL-4-HYDROXY-5-(TERT-BUTOXYCARBONYL)AMINO-6-PHENYL HEXANOYL-N-(1'-IMIDAZO-2-YL)-2'-METHYLPROPANAMIDE, HIV PROTEASE
Authors:Hoog, S.S, Abdel-Meguid, S.S.
Deposit date:1996-06-05
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human immunodeficiency virus protease ligand specificity conferred by residues outside of the active site cavity.
Biochemistry, 35, 1996
1QMP
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Phosphorylated aspartate in the crystal structure of the sporulation response regulator, Spo0A
Descriptor: CALCIUM ION, Stage 0 sporulation protein A
Authors:Lewis, R.J, Brannigan, J.A, Muchova, K, Barak, I, Wilkinson, A.J.
Deposit date:1999-10-04
Release date:1999-11-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Phosphorylated aspartate in the structure of a response regulator protein.
J. Mol. Biol., 294, 1999
2Y2F
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Crystal structure of Yersinia pestis YopH in complex with an aminooxy- containing platform compound for inhibitor design
Descriptor: PROTEIN-TYROSINE PHOSPHATASE YOPH, [4-[3-(DIFLUORO-PHOSPHONO-METHYL)PHENYL]PHENYL]METHOXYAZANIUM
Authors:Lountos, G.T, Bahta, M, Dyas, B, Ulrich, R.G, Waugh, D.S, Burke, T.R.
Deposit date:2010-12-14
Release date:2011-03-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Utilization of Nitrophenylphosphates and Oxime-Based Ligation for the Development of Nanomolar Affinity Inhibitors of the Yersinia Pestis Outer Protein H (Yoph) Phosphatase.
J.Med.Chem., 54, 2011
1TCW
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SIV PROTEASE COMPLEXED WITH INHIBITOR SB203386
Descriptor: (2R,4S,5S,1'S)-2-PHENYLMETHYL-4-HYDROXY-5-(TERT-BUTOXYCARBONYL)AMINO-6-PHENYL HEXANOYL-N-(1'-IMIDAZO-2-YL)-2'-METHYLPROPANAMIDE, SIV PROTEASE
Authors:Hoog, S.S, Abdel-Meguid, S.S.
Deposit date:1996-06-05
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Human immunodeficiency virus protease ligand specificity conferred by residues outside of the active site cavity.
Biochemistry, 35, 1996
1TN2
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CRYSTALLOGRAPHIC AND BIOCHEMICAL INVESTIGATION OF THE LEAD(II)-CATALYZED HYDROLYSIS OF YEAST PHENYLALANINE T-RNA
Descriptor: LEAD (II) ION, MAGNESIUM ION, SPERMINE, ...
Authors:Brown, R.S, Dewan, J.C, Klug, A.
Deposit date:1986-08-22
Release date:1986-10-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic and biochemical investigation of the lead(II)-catalyzed hydrolysis of yeast phenylalanine tRNA.
Biochemistry, 24, 1985
1QX3
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Conformational restrictions in the active site of unliganded human caspase-3
Descriptor: Apopain
Authors:Ni, C.-Z, Li, C, Wu, J.C, Spada, A.P, Ely, K.R.
Deposit date:2003-09-04
Release date:2003-10-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational restrictions in the active site of unliganded human caspase-3
J.MOL.RECOG., 16, 2003
3EQO
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BU of 3eqo by Molmil
Crystal structure of beta-1,3-glucanase from Phanerochaete chrysosporium (Lam55A) gluconolactone complex
Descriptor: D-glucono-1,5-lactone, Glucan 1,3-beta-glucosidase, ZINC ION, ...
Authors:Ishida, T, Fushinobu, S, Kawai, R, Kitaoka, M, Igarashi, K, Samejima, M.
Deposit date:2008-10-01
Release date:2009-02-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of glycoside hydrolase family 55 beta -1,3-glucanase from the basidiomycete Phanerochaete chrysosporium
J.Biol.Chem., 284, 2009
2A6E
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BU of 2a6e by Molmil
Crystal structure of the T. Thermophilus RNA polymerase holoenzyme
Descriptor: DNA-directed RNA polymerase alpha chain, DNA-directed RNA polymerase beta chain, DNA-directed RNA polymerase beta' chain, ...
Authors:Artsimovitch, I, Vassylyeva, M.N, Svetlov, D, Svetlov, V, Perederina, A, Igarashi, N, Matsugaki, N, Wakatsuki, S, Tahirov, T.H, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-02
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins.
Cell(Cambridge,Mass.), 122, 2005
1QO3
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Complex between NK cell receptor Ly49A and its MHC class I ligand H-2Dd
Descriptor: 1,2-ETHANEDIOL, BETA-2-MICROGLOBULIN, HIV ENVELOPE GLYCOPROTEIN 120 PEPTIDE, ...
Authors:Tormo, J, Mariuzza, R.A.
Deposit date:1999-11-01
Release date:2000-01-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of a Lectin-Like Natural Killer Cell Receptor Bound to its Mhc Class I Ligand
Nature, 402, 1999
3TGE
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BU of 3tge by Molmil
A novel series of potent and selective PDE5 inhibitor1
Descriptor: 7-(6-methoxypyridin-3-yl)-3-{[2-(morpholin-4-yl)ethyl]amino}-1-(2-propoxyethyl)pyrido[3,4-b]pyrazin-2(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Han, S.
Deposit date:2011-08-17
Release date:2011-11-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Investigation of the pyrazinones as PDE5 inhibitors: Evaluation of regioisomeric projections into the solvent region.
Bioorg.Med.Chem.Lett., 21, 2011
2AL0
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BU of 2al0 by Molmil
Crystal structure of nitrophorin 2 ferrous aqua complex
Descriptor: CITRIC ACID, Nitrophorin 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weichsel, A, Berry, R.E, Walker, F.A, Montfort, W.R.
Deposit date:2005-08-04
Release date:2006-07-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures, ligand induced conformational change and heme deformation in complexes of nitrophorin 2, a nitric oxide transport protein from rhodnius prolixus
To be Published
3TGG
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A novel series of potent and selective PDE5 inhibitor2
Descriptor: 7-(6-methoxypyridin-3-yl)-4-{[2-(propan-2-yloxy)ethyl]amino}-1-(2-propoxyethyl)pyrido[4,3-d]pyrimidin-2(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Han, S.
Deposit date:2011-08-17
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Investigation of the pyrazinones as PDE5 inhibitors: evaluation of regioisomeric projections into the solvent region.
Bioorg.Med.Chem.Lett., 21, 2011
2E3Z
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BU of 2e3z by Molmil
Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium in substrate-free form
Descriptor: Beta-glucosidase
Authors:Nijikken, Y, Tsukada, T, Igarashi, K, Samejima, M, Fushinobu, S.
Deposit date:2006-12-01
Release date:2007-03-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium
Febs Lett., 581, 2007
2E40
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BU of 2e40 by Molmil
Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium in complex with gluconolactone
Descriptor: Beta-glucosidase, D-glucono-1,5-lactone
Authors:Nijikken, Y, Tsukada, T, Igarashi, K, Samejima, M, Fushinobu, S.
Deposit date:2006-12-01
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium
Febs Lett., 581, 2007
2E4Q
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Crystal structure of BphA3 (reduced form)
Descriptor: Biphenyl dioxygenase ferredoxin subunit, FE2/S2 (INORGANIC) CLUSTER
Authors:Senda, M, Kishigami, S, Kimura, S, Ishida, T, Fukuda, M, Senda, T.
Deposit date:2006-12-15
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
3U01
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BU of 3u01 by Molmil
Crystal structure of onconase double mutant C30A/C75A at 1.12 A resolution
Descriptor: ACETATE ION, Protein P-30, SULFATE ION
Authors:Kurpiewska, K, Torrent, G, Ribo, M, Vilanova, M, Loch, J, Lewinski, K.
Deposit date:2011-09-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Investigating the effects of double mutation C30A/C75A on onconase structure: Studies at atomic resolution.
Biopolymers, 101, 2014
1WCI
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BU of 1wci by Molmil
Reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch
Descriptor: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, C2-1-HYDROXY-3-METHYL-BUTYL-THIAMIN, ...
Authors:Machius, M, Wynn, R.M, Chuang, J.L, Tomchick, D.R, Brautigam, C.A, Chuang, D.T.
Deposit date:2004-11-16
Release date:2006-02-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A Versatile Conformational Switch Regulates Reactivity in Human Branched-Chain Alpha-Ketoacid Dehydrogenase.
Structure, 14, 2006
1SP9
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BU of 1sp9 by Molmil
4-Hydroxyphenylpyruvate Dioxygenase
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (II) ION
Authors:Fritze, I.M, Linden, L, Freigang, J, Auerbach, G, Huber, R, Steinbacher, S.
Deposit date:2004-03-16
Release date:2004-09-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structures of Zea mays and Arabidopsis 4-Hydroxyphenylpyruvate Dioxygenase
Plant Physiol., 134, 2004
2R1B
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BU of 2r1b by Molmil
Crystal Structure of rat neurexin 1beta with a splice insert at SS#4
Descriptor: CALCIUM ION, Neurexin-1-beta
Authors:Rudenko, G.
Deposit date:2007-08-22
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Regulation of Neurexin 1beta Tertiary Structure and Ligand Binding through Alternative Splicing
Structure, 16, 2008
2Y8A
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VIM-7 with Oxidised. Structural and computational investigations of VIM-7: Insights into the substrate specificity of VIM metallo-beta- lactamases
Descriptor: MAGNESIUM ION, METALLO-B-LACTAMASE, UNKNOWN ATOM OR ION, ...
Authors:Saradhi, P, Leiros, H.-K.S, Ahmad, R, Spencer, J, Leiros, I, Walsh, T.R, Sundsfjord, A, Samuelsen, O.
Deposit date:2011-02-03
Release date:2011-06-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structural and Computational Investigations of Vim- 7: Insights Into the Substrate Specificity of Vim Metallo-Beta-Lactamases
J.Mol.Biol., 411, 2011

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