PDB: 73665 resultsInfo pagesStatus searchChemie searchBIRD

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3AQL	Structure of bacterial protein (apo form II) Descriptor: GLYCEROL, MAGNESIUM ION, Poly(A) polymerase Authors: Toh, Y, Takeshita, D, Tomita , K. Deposit date: 2010-11-09 Release date: 2011-02-09 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases Structure, 19, 2011
3K2P	HIV-1 Reverse Transcriptase Isolated RnaseH Domain with the Inhibitor beta-thujaplicinol Bound at the Active Site Descriptor: 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one, MANGANESE (II) ION, Reverse Transcriptase Authors: Pauly, T.A, Himmel, D.M, Maegley, K, Arnold, E. Deposit date: 2009-09-30 Release date: 2010-02-09 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Structure of HIV-1 reverse transcriptase with the inhibitor beta-Thujaplicinol bound at the RNase H active site. Structure, 17, 2009
4LMO	Structure of a vertebrate RNA binding domain of telomerase (TRBD) Descriptor: Telomerase reverse transcriptase Authors: Harkisheimer, M, Mason, M, Shuvaeva, E, Skordalakes, E. Deposit date: 2013-07-10 Release date: 2013-10-09 Last modified: 2013-10-30 Method: X-RAY DIFFRACTION (2.37 Å) Cite: A Motif in the Vertebrate Telomerase N-Terminal Linker of TERT Contributes to RNA Binding and Telomerase Activity and Processivity. Structure, 21, 2013
4FSJ	Crystal structure of the virus like particle of Flock House virus Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... Authors: Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E. Deposit date: 2012-06-27 Release date: 2012-08-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides to be published, 2012
8EJM	Crystal structure of human DEAH-box helicase DHX15 in complex with SUGP1 G-patch Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DHX15, CHLORIDE ION, ... Authors: Huang, J, Tong, L. Deposit date: 2022-09-17 Release date: 2022-12-14 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.8 Å) Cite: DHX15 is involved in SUGP1-mediated RNA missplicing by mutant SF3B1 in cancer. Proc.Natl.Acad.Sci.USA, 119, 2022
3AU7	Crystal structure of the ZRD-deleted mutant of TiaS in complex with agmatine Descriptor: AGMATINE, Putative uncharacterized protein Authors: Numata, T, Osawa, T. Deposit date: 2011-01-31 Release date: 2011-10-19 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis of tRNA agmatinylation essential for AUA codon decoding Nat.Struct.Mol.Biol., 18, 2011
3AQM	Structure of bacterial protein (form II) Descriptor: MAGNESIUM ION, Poly(A) polymerase Authors: Toh, Y, Takeshita, D, Tomita , K. Deposit date: 2010-11-09 Release date: 2011-02-09 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Mechanism for the alteration of the substrate specificities of template-independent RNA polymerases Structure, 19, 2011
3AA3	A52L E. coli RNase HI Descriptor: Ribonuclease HI Authors: Takano, K. Deposit date: 2009-11-11 Release date: 2010-10-06 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI Protein Pept.Lett., 17, 2010
2LDZ	SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: LEAD-DEPENDENT RIBOZYME Authors: Hoogstraten, C.G, Legault, P, Pardi, A. Deposit date: 1998-08-18 Release date: 1999-02-23 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR solution structure of the lead-dependent ribozyme: evidence for dynamics in RNA catalysis. J.Mol.Biol., 284, 1998
3AA2	A52I E. coli RNase HI Descriptor: Ribonuclease HI Authors: Takano, K. Deposit date: 2009-11-11 Release date: 2010-10-06 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI Protein Pept.Lett., 17, 2010
3AA5	A52F E.coli RNase HI Descriptor: Ribonuclease HI Authors: Takano, K. Deposit date: 2009-11-11 Release date: 2010-10-06 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Protein core adaptability: crystal structures of the cavity-filling variants of Escherichia coli RNase HI Protein Pept.Lett., 17, 2010
2YV0	Structural and Thermodynamic Analyses of E. coli ribonuclease HI Variant with Quintuple Thermostabilizing Mutations Descriptor: Ribonuclease HI Authors: Haruki, M, Motegi, T, Tadokoro, T, Koga, Y, Takano, K, Kanaya, S. Deposit date: 2007-04-06 Release date: 2008-03-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural and thermodynamic analyses of Escherichia coli RNase HI variant with quintuple thermostabilizing mutations. Febs J., 274, 2007
2YTZ	Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Homocystein in the orthorhombic crystal-lattice Descriptor: N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION Authors: Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-05 Release date: 2007-10-09 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii J.Mol.Biol., 383, 2008
4GEN	Crystal structure of Zucchini (monomer) Descriptor: CHLORIDE ION, Mitochondrial cardiolipin hydrolase Authors: Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O. Deposit date: 2012-08-02 Release date: 2012-10-17 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012
2RO0	Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1 Descriptor: Histone acetyltransferase ESA1 Authors: Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y. Deposit date: 2008-03-01 Release date: 2008-04-29 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain J.Mol.Biol., 378, 2008
2LVG	NMR structure of HCV Non-structural protein AB, NS4B(1-40) Descriptor: Non-structural protein 4B Authors: Montserret, R, Penin, F. Deposit date: 2012-07-05 Release date: 2013-06-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Aminoterminal Amphipathic alpha-Helix AH1 of Hepatitis C Virus Nonstructural Protein 4B Possesses a Dual Role in RNA Replication and Virus Production. Plos Pathog., 10, 2014
4FTS	Crystal structure of the N363T mutant of the Flock House virus capsid Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... Authors: Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E. Deposit date: 2012-06-28 Release date: 2012-08-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides to be published, 2012
8XF7	High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine E bound Descriptor: (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone, 1,2-ETHANEDIOL, FE (III) ION, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.12 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
8XET	High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.11 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
8XFA	Structure of the siderophore periplasmic binding protein FtsB mutant Y137A from Streptococcus pyogenes with ferrioxamine E bound Descriptor: (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone, FE (III) ION, GLYCEROL, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
6D8L	Group I self-splicing intron P4-P6 domain mutant U131A (without isopropanol soaking) Descriptor: Group I self-splicing intron, MAGNESIUM ION Authors: Shoffner, G.M. Deposit date: 2018-04-26 Release date: 2018-07-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.1402154 Å) Cite: In Crystallo Selection to Establish New RNA Crystal Contacts. Structure, 26, 2018
8XEU	Structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrichrome bound Descriptor: FERRICHROME, Iron-hydroxamate ABC transporter substrate-binding protein FtsB Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
8XF9	High-resolution structure of the siderophore periplasmic binding protein FtsB mutant Y137A from Streptococcus pyogenes Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
8XFI	High-resolution structure of the siderophore periplasmic binding protein FtsB from Streptococcus pyogenes with ferrioxamine E bound (crystal form 2) Descriptor: (8E)-6,17,28-trihydroxy-1,6,12,17,23,28-hexaazacyclotritriacont-8-ene-2,5,13,16,24,27-hexone, CHLORIDE ION, FE (III) ION, ... Authors: Caaveiro, J.M.M, Fernandez-Perez, J, Tsumoto, K. Deposit date: 2023-12-13 Release date: 2024-10-09 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Conserved binding mechanism for ligand promiscuity in the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes Structure
6DN2	CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1354 SPLIT RNA Descriptor: 4-{benzyl[2-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)ethyl]amino}butanoic acid, MAGNESIUM ION, POTASSIUM ION, ... Authors: Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T. Deposit date: 2018-06-05 Release date: 2018-09-05 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.88 Å) Cite: Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch. ACS Chem. Biol., 13, 2018

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