2WBT
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![BU of 2wbt by Molmil](/molmil-images/mine/2wbt) | The Structure of a Double C2H2 Zinc Finger Protein from a Hyperthermophilic Archaeal Virus in the Absence of DNA | Descriptor: | B-129, ZINC ION | Authors: | Eilers, B.J, Menon, S, Windham, A.B, Kraft, P, Dlakic, M, Young, M.J, Lawrence, C.M. | Deposit date: | 2009-03-03 | Release date: | 2010-03-31 | Last modified: | 2019-05-08 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | The Structure of a Double C2H2 Zinc Finger Protein from a Hyperthermophilic Archaeal Virus in the Absence of DNA To be Published
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5ZO5
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![BU of 5zo5 by Molmil](/molmil-images/mine/5zo5) | active state of the nuclease | Descriptor: | MANGANESE (II) ION, Putative 3'-5' exonuclease family protein, SULFATE ION | Authors: | Yuan, Z.L, Gu, L.C. | Deposit date: | 2018-04-12 | Release date: | 2019-04-10 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.297 Å) | Cite: | NrnC, an RNase D-Like Protein FromAgrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact. Front Microbiol, 9, 2018
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7VT2
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![BU of 7vt2 by Molmil](/molmil-images/mine/7vt2) | Azumapecten Farreri ferritin | Descriptor: | FE (III) ION, Ferritin | Authors: | Zhao, G, Zhang, C. | Deposit date: | 2021-10-27 | Release date: | 2022-11-16 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structural comparison between the DNA-protective ability of scallop and shrimp ferritin from iron-induced oxidative damage. Food Chem, 386, 2022
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5D5K
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![BU of 5d5k by Molmil](/molmil-images/mine/5d5k) | |
1VYA
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![BU of 1vya by Molmil](/molmil-images/mine/1vya) | |
6TX2
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![BU of 6tx2 by Molmil](/molmil-images/mine/6tx2) | Human HPF1 | Descriptor: | Histone PARylation factor 1, SODIUM ION | Authors: | Suskiewicz, M.J, Ahel, I. | Deposit date: | 2020-01-13 | Release date: | 2020-02-19 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.09 Å) | Cite: | HPF1 completes the PARP active site for DNA damage-induced ADP-ribosylation. Nature, 579, 2020
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3V20
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![BU of 3v20 by Molmil](/molmil-images/mine/3v20) | Crystal structure of Type IIF restriction endonuclease Bse634I with cognate DNA | Descriptor: | 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, CALCIUM ION, CHLORIDE ION, ... | Authors: | Manakova, E.N, Grazulis, S, Golovenko, D, Tamulaitiene, G. | Deposit date: | 2011-12-11 | Release date: | 2012-04-25 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Structural mechanisms of the degenerate sequence recognition by Bse634I restriction endonuclease. Nucleic Acids Res., 40, 2012
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1EFY
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![BU of 1efy by Molmil](/molmil-images/mine/1efy) | CRYSTAL STRUCTURE OF THE CATALYTIC FRAGMENT OF POLY (ADP-RIBOSE) POLYMERASE COMPLEXED WITH A BENZIMIDAZOLE INHIBITOR | Descriptor: | 2-(3'-METHOXYPHENYL) BENZIMIDAZOLE-4-CARBOXAMIDE, POLY (ADP-RIBOSE) POLYMERASE | Authors: | White, A.W, Almassy, R, Calvert, A.H, Curtin, N.J, Griffin, R.J, Hostomsky, Z, Maegley, K, Newell, D.R, Srinivasan, S, Golding, B.T. | Deposit date: | 2000-02-10 | Release date: | 2001-01-17 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Resistance-modifying agents. 9. Synthesis and biological properties of benzimidazole inhibitors of the DNA repair enzyme poly(ADP-ribose) polymerase. J.Med.Chem., 43, 2000
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7Z4D
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7NE3
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![BU of 7ne3 by Molmil](/molmil-images/mine/7ne3) | Human TET2 in complex with favourable DNA substrate. | Descriptor: | 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*CP*AP*GP*GP*(5CM)P*GP*CP*CP*TP*G)-3'), ... | Authors: | Rafalski, D, Bochtler, M. | Deposit date: | 2021-02-03 | Release date: | 2022-03-02 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function. Sci Adv, 8, 2022
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1PFE
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![BU of 1pfe by Molmil](/molmil-images/mine/1pfe) | Echinomycin-(gcgtacgc)2 complex | Descriptor: | 2-CARBOXYQUINOXALINE, 5'-D(*GP*CP*GP*TP*AP*CP*GP*C)-3', CHLORIDE ION, ... | Authors: | Cuesta-Seijo, J.A. | Deposit date: | 2003-05-26 | Release date: | 2004-06-08 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.1 Å) | Cite: | Structures of Complexes between Echinomycin and Duplex DNA. Acta Crystallogr.,Sect.D, 61, 2005
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7NE6
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![BU of 7ne6 by Molmil](/molmil-images/mine/7ne6) | Human TET2 in complex with unfavourable DNA substrate. | Descriptor: | 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*CP*AP*GP*GP*(5CM)P*GP*CP*CP*TP*G)-3'), ... | Authors: | Rafalski, D, Bochtler, M. | Deposit date: | 2021-02-03 | Release date: | 2022-03-02 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function. Sci Adv, 8, 2022
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7ARV
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![BU of 7arv by Molmil](/molmil-images/mine/7arv) | TwistTower_native-twist | Descriptor: | SCAFFOLD STRAND, STAPLE STRAND | Authors: | Kube, M, Kohler, F, Feigl, E, Nagel-Yuksel, B, Willner, E.M, Funke, J.J, Gerling, T, Stommer, P, Honemann, M.N, Martin, T.G, Scheres, S.H.W, Dietz, H. | Deposit date: | 2020-10-26 | Release date: | 2020-11-18 | Last modified: | 2024-05-15 | Method: | ELECTRON MICROSCOPY (7.4 Å) | Cite: | Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution. Nat Commun, 11, 2020
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2RSI
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3W2X
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1PO6
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1UCR
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![BU of 1ucr by Molmil](/molmil-images/mine/1ucr) | Three-dimensional crystal structure of dissimilatory sulfite reductase D (DsrD) | Descriptor: | Protein dsvD, SULFATE ION | Authors: | Mizuno, N, Voordouw, G, Miki, K, Sarai, A, Higuchi, Y. | Deposit date: | 2003-04-18 | Release date: | 2003-10-14 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Crystal Structure of Dissimilatory Sulfite Reductase D (DsrD) Protein-Possible Interaction with B- and Z-DNA by Its Winged-Helix Motif STRUCTURE, 11, 2003
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2BEK
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![BU of 2bek by Molmil](/molmil-images/mine/2bek) | |
2BEJ
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6CC2
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![BU of 6cc2 by Molmil](/molmil-images/mine/6cc2) | Crystal Structure of CDC45 from Entamoeba histolytica | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, Cell division control protein 45 cdc45 putative, ... | Authors: | Shi, K, Kurniawan, F, Kurahashi, K, Bielinsky, A, Aihara, H. | Deposit date: | 2018-02-05 | Release date: | 2018-06-27 | Last modified: | 2020-01-01 | Method: | X-RAY DIFFRACTION (1.66 Å) | Cite: | Crystal Structure ofEntamoeba histolyticaCdc45 Suggests a Conformational Switch that May Regulate DNA Replication. iScience, 3, 2018
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7WU8
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2AQF
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![BU of 2aqf by Molmil](/molmil-images/mine/2aqf) | Structural and functional analysis of ADA2 alpha swirm domain | Descriptor: | transcriptional adaptor 2, Ada2 alpha | Authors: | Qian, C, Zhang, Q, Zhou, M.-M, Zeng, L. | Deposit date: | 2005-08-17 | Release date: | 2006-01-31 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structure and chromosomal DNA binding of the SWIRM domain. Nat.Struct.Mol.Biol., 12, 2005
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5AHO
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![BU of 5aho by Molmil](/molmil-images/mine/5aho) | Crystal structure of human 5' exonuclease Apollo | Descriptor: | 1,2-ETHANEDIOL, 5' EXONUCLEASE APOLLO, L(+)-TARTARIC ACID, ... | Authors: | Allerston, C.K, Vollmar, M, Krojer, T, Pike, A.C.W, Newman, J.A, Carpenter, E, Quigley, A, Mahajan, P, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Gileadi, O. | Deposit date: | 2015-02-06 | Release date: | 2015-02-18 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.16 Å) | Cite: | The Structures of the Snm1A and Snm1B/Apollo Nuclease Domains Reveal a Potential Basis for Their Distinct DNA Processing Activities. Nucleic Acids Res., 43, 2015
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1N4B
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![BU of 1n4b by Molmil](/molmil-images/mine/1n4b) | Solution Structure of the undecamer CGAAAC*TTTCG | Descriptor: | 5'-D(*CP*GP*AP*AP*AP*CP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*AP*D00*TP*TP*TP*CP*G)-3' | Authors: | Webba da Silva, M, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P. | Deposit date: | 2002-10-30 | Release date: | 2003-11-04 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution Structure of a DNA Duplex Containing
Mispair-Aligned N4C-Ethyl-N4C
Interstrand Cross-Linked Cytosines Biochemistry, 41, 2002
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6OIS
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![BU of 6ois by Molmil](/molmil-images/mine/6ois) | CryoEM structure of Arabidopsis DR complex (DMS3-RDM1) | Descriptor: | Protein DEFECTIVE IN MERISTEM SILENCING 3, Protein RDM1 | Authors: | Wongpalee, S.P, Liu, S, Zhou, Z.H, Jacobsen, S.E. | Deposit date: | 2019-04-09 | Release date: | 2019-07-24 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation. Nat Commun, 10, 2019
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