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1DBM
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BU of 1dbm by Molmil
MOLECULAR BASIS OF CROSS-REACTIVITY AND THE LIMITS OF ANTIBODY-ANTIGEN COMPLEMENTARITY
Descriptor: IGG1-KAPPA DB3 FAB (HEAVY CHAIN), IGG1-KAPPA DB3 FAB (LIGHT CHAIN), PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE
Authors:Arevalo, J.H, Wilson, I.A.
Deposit date:1993-08-24
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of crossreactivity and the limits of antibody-antigen complementarity.
Nature, 365, 1993
1DBJ
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BU of 1dbj by Molmil
MOLECULAR BASIS OF CROSS-REACTIVITY AND THE LIMITS OF ANTIBODY-ANTIGEN COMPLEMENTARITY
Descriptor: AETIOCHOLANOLONE, IGG1-KAPPA DB3 FAB (HEAVY CHAIN), IGG1-KAPPA DB3 FAB (LIGHT CHAIN)
Authors:Arevalo, J.H, Wilson, I.A.
Deposit date:1993-08-24
Release date:1994-01-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of crossreactivity and the limits of antibody-antigen complementarity.
Nature, 365, 1993
1EAP
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BU of 1eap by Molmil
CRYSTAL STRUCTURE OF A CATALYTIC ANTIBODY WITH A SERINE PROTEASE ACTIVE SITE
Descriptor: IGG2B-KAPPA 17E8 FAB (HEAVY CHAIN), IGG2B-KAPPA 17E8 FAB (LIGHT CHAIN), PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE
Authors:Zhou, G.W, Guo, J, Huang, W, Scanlan, T.S, Fletterick, R.J.
Deposit date:1994-08-10
Release date:1994-12-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a catalytic antibody with a serine protease active site.
Science, 265, 1994
5JMO
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BU of 5jmo by Molmil
X-ray structure of furin in complex with the inhibitory antibody Nb14
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CMK-inhibitor, ...
Authors:Dahms, S.O, Than, M.E.
Deposit date:2016-04-29
Release date:2016-12-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:The structure of a furin-antibody complex explains non-competitive inhibition by steric exclusion of substrate conformers.
Sci Rep, 6, 2016
8QXC
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BU of 8qxc by Molmil
Crystal structure of antibody Fab MIL-3 with PenG-Lys
Descriptor: (2R,4S)-2-[(1R)-2-[[(5S)-5-acetamido-6-oxidanyl-6-oxidanylidene-hexyl]amino]-2-oxidanylidene-1-(2-phenylethanoylamino)ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Heavy chain of FAB MIL-3, Light chain of FAB MIL-3
Authors:Moynie, L, Naismith, J.H.
Deposit date:2023-10-24
Release date:2024-07-31
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Covalent penicillin-protein conjugates elicit anti-drug antibodies that are clonally and functionally restricted.
Nat Commun, 15, 2024
5CD3
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BU of 5cd3 by Molmil
Structure of immature VRC01-class antibody DRVIA7
Descriptor: DRVIA7 Heavy Chain, DRVIA7 Light Chain
Authors:Kong, L, Wilson, I.A.
Deposit date:2015-07-02
Release date:2016-04-06
Last modified:2018-09-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Key gp120 Glycans Pose Roadblocks to the Rapid Development of VRC01-Class Antibodies in an HIV-1-Infected Chinese Donor.
Immunity, 44, 2016
3AUV
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BU of 3auv by Molmil
Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface
Descriptor: sc-dsFv derived from the G6-Fab
Authors:Yu, C.M, Peng, H.P, Chen, I.C, Lee, Y.C, Chen, J.B, Tsai, K.C, Chen, C.T, Chang, J.Y, Yang, E.W, Hsu, P.C, Jian, J.W, Hsu, H.J, Chang, H.J, Hsu, W.L, Huang, K.F, Ma, A.C, Yang, A.S.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-04-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rationalization and design of the complementarity determining region sequences in an antibody-antigen recognition interface
Plos One, 7, 2012
2G75
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BU of 2g75 by Molmil
Crystal Structure of anti-SARS m396 Antibody
Descriptor: IGG Heavy Chain, IGG Light Chain
Authors:Prabakaran, P, Gan, J.H, Feng, Y, Zhu, Z.Y, Xiao, X.D, Ji, X, Dimitrov, D.S.
Deposit date:2006-02-27
Release date:2006-04-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody.
J.Biol.Chem., 281, 2006
4RFO
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BU of 4rfo by Molmil
Crystal structure of the ADCC-Potent Antibody N60-I3 Fab in complex with HIV-1 Clade A/E gp120 and M48u1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 clade A/E gp120, N60-i3 Fab heavy chain, ...
Authors:Tolbert, W.D, Gohain, N, Pazgier, M.
Deposit date:2014-09-26
Release date:2015-07-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1.
J.Virol., 89, 2015
6KYZ
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BU of 6kyz by Molmil
HRV14 3C in complex with single chain antibody YDF
Descriptor: Genome polyprotein, YDF H chain, YDF L chain
Authors:Meng, B, Yang, B, Wilson, I.A.
Deposit date:2019-09-20
Release date:2020-05-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.845 Å)
Cite:Inhibitory antibodies identify unique sites of therapeutic vulnerability in rhinovirus and other enteroviruses.
Proc.Natl.Acad.Sci.USA, 117, 2020
5JMR
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BU of 5jmr by Molmil
X-ray structure of the furin inhibitory antibody Nb14
Descriptor: CHLORIDE ION, camelid VHH fragment
Authors:Dahms, S.O, Than, M.E.
Deposit date:2016-04-29
Release date:2016-12-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:The structure of a furin-antibody complex explains non-competitive inhibition by steric exclusion of substrate conformers.
Sci Rep, 6, 2016
6LDX
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BU of 6ldx by Molmil
Structure antibody E6 in complex with methylated peptide
Descriptor: CHLORIDE ION, Fab Heavy chain, Fab light chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
6LDY
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BU of 6ldy by Molmil
Structure antibody D6 in complex with methylated peptide
Descriptor: CALCIUM ION, CHLORIDE ION, Fab heavy chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
6LDW
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BU of 6ldw by Molmil
Structure of antibody C9 in complex with methylated peptide
Descriptor: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
Authors:Caaveiro, J.M.M, Tsumoto, K.
Deposit date:2019-11-23
Release date:2020-11-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for antigen recognition by methylated lysine-specific antibodies.
J.Biol.Chem., 296, 2020
1CS9
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BU of 1cs9 by Molmil
SOLUTION STRUCTURE OF CGGIRGERA IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 7 STRUCTURES
Descriptor: HISTONE H3 PEPTIDE
Authors:Phan Chan Du, A, Petit, M.C, Guichard, G, Briand, J.P, Muller, S, Cung, M.T.
Deposit date:1999-08-18
Release date:1999-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach.
Biochemistry, 40, 2001
6GV4
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BU of 6gv4 by Molmil
High-resolution Cryo-EM of Fab-labeled human parechovirus 3
Descriptor: AT12-015 antibody variable heavy, AT12-015 antibody variable light, RNA (5'-R(*UP*GP*GP*UP*AP*UP*UP*U)-3'), ...
Authors:Domanska, A, Flatt, J.W, Jukonen, J.J.J, Geraets, J.A, Butcher, S.J.
Deposit date:2018-06-20
Release date:2018-11-21
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A 2.8-Angstrom-Resolution Cryo-Electron Microscopy Structure of Human Parechovirus 3 in Complex with Fab from a Neutralizing Antibody.
J.Virol., 93, 2019
6QFC
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BU of 6qfc by Molmil
Structure of an anti-Mcl1 scFv
Descriptor: DIMETHYL SULFOXIDE, Induced myeloid leukemia cell differentiation protein Mcl-1, scFv55
Authors:Luptak, J.
Deposit date:2019-01-09
Release date:2019-11-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Antibody fragments structurally enable a drug-discovery campaign on the cancer target Mcl-1.
Acta Crystallogr D Struct Biol, 75, 2019
5BV7
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BU of 5bv7 by Molmil
Crystal structure of human LCAT (L4F, N5D) in complex with Fab of an agonistic antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 27C3 heavy chain, 27C3 light chain, ...
Authors:Piper, D.E, Romanow, W.G, Thibault, S.T, Walker, N.P.C.
Deposit date:2015-06-04
Release date:2015-12-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Agonistic Human Antibodies Binding to Lecithin-Cholesterol Acyltransferase Modulate High Density Lipoprotein Metabolism.
J.Biol.Chem., 291, 2016
43CA
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BU of 43ca by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY WITH BOUND P-NITROPHENOL
Descriptor: P-NITROPHENOL, PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
Authors:Thayer, M.M, Getzoff, E.D, Roberts, V.A.
Deposit date:1999-03-10
Release date:1999-08-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
43C9
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BU of 43c9 by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF THE ESTEROLYTIC AND AMIDOLYTIC 43C9 ANTIBODY
Descriptor: PROTEIN (IMMUNOGLOBULIN (HEAVY CHAIN)), PROTEIN (IMMUNOGLOBULIN (LIGHT CHAIN))
Authors:Thayer, M.M, Getzoff, E.D, Roberts, V.A.
Deposit date:1999-03-10
Release date:1999-08-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
J.Mol.Biol., 291, 1999
1XF2
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BU of 1xf2 by Molmil
Structure of Fab DNA-1 complexed with dT3
Descriptor: 5'-D(*TP*TP*T)-3', SULFATE ION, antibody heavy chain Fab, ...
Authors:Schuermann, J.P, Prewitt, S.P, Deutscher, S.L, Tanner, J.J.
Deposit date:2004-09-13
Release date:2005-04-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence for Structural Plasticity of Heavy Chain Complementarity-determining Region 3 in Antibody-ssDNA Recognition
J.Mol.Biol., 347, 2005
2H1P
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BU of 2h1p by Molmil
THE THREE-DIMENSIONAL STRUCTURES OF A POLYSACCHARIDE BINDING ANTIBODY TO CRYPTOCOCCUS NEOFORMANS AND ITS COMPLEX WITH A PEPTIDE FROM A PHAGE DISPLAY LIBRARY: IMPLICATIONS FOR THE IDENTIFICATION OF PEPTIDE MIMOTOPES
Descriptor: 2H1, PA1
Authors:Young, A.C.M, Valadon, P, Casadevall, A, Scharff, M.D, Sacchettini, J.C.
Deposit date:1997-11-12
Release date:1998-01-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The three-dimensional structures of a polysaccharide binding antibody to Cryptococcus neoformans and its complex with a peptide from a phage display library: implications for the identification of peptide mimotopes.
J.Mol.Biol., 274, 1997
1TOS
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BU of 1tos by Molmil
TORPEDO CALIFORNICA ACHR RECEPTOR [ALA76] ANALOGUE COMPLEXED WITH THE ANTI-ACETYLCHOLINE MAB6 MONOCLONAL ANTIBODY
Descriptor: ACETYLCHOLINE RECEPTOR [ALA76] MIR ANALOGUE
Authors:Orlewski, P, Tsikaris, V, Sakarellos, C, Sakarellos-Daistiotis, M, Vatzaki, E, Tzartos, S.J, Marraud, M, Cung, M.T.
Deposit date:1995-10-11
Release date:1996-03-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Compared structures of the free nicotinic acetylcholine receptor main immunogenic region (MIR) decapeptide and the antibody-bound [A76]MIR analogue: a molecular dynamics simulation from two-dimensional NMR data.
Biopolymers, 40, 1996
1CW8
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BU of 1cw8 by Molmil
SOLUTION STRUCTURE OF THE ANALOGUE RETRO-INVERSO (mA-R)REGRIGGC IN CONTACT WITH THE MONOCLONAL ANTIBODY MAB 4X11, NMR, 6 STRUCTURES
Descriptor: HISTONE H3, METHYLMALONIC ACID
Authors:Phan Chan Du, A, Petit, M.C, Guichard, G, Briand, J.P, Muller, S, Cung, T.
Deposit date:1999-08-26
Release date:1999-09-03
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Structure of antibody-bound peptides and retro-inverso analogues. A transferred nuclear Overhauser effect spectroscopy and molecular dynamics approach.
Biochemistry, 40, 2001
2XEG
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BU of 2xeg by Molmil
Human glutamate carboxypeptidase II in complex with Antibody- Recruiting Molecule ARM-P4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Zhang, A.X, Murelli, R.P, Barinka, C, Michel, J, Cocleaza, A, Jorgensen, W.L, Lubkowski, J, Spiegel, D.A.
Deposit date:2010-05-14
Release date:2010-09-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:A Remote Arene-Binding Site on Prostate Specific Membrane Antigen Revealed by Antibody-Recruiting Small Molecules.
J.Am.Chem.Soc., 132, 2010

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