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5R3R
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BU of 5r3r by Molmil
PanDDA analysis group deposition -- Auto-refined data of Endothiapepsin for ground state model 51, DMSO-Free
Descriptor: Endothiapepsin
Authors:Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G, Weiss, M.S.
Deposit date:2020-02-13
Release date:2020-06-03
Last modified:2020-07-08
Method:X-RAY DIFFRACTION (0.979 Å)
Cite:F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening.
Structure, 28, 2020
4RTZ
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BU of 4rtz by Molmil
Crystal structure of the c-Src-SH3 domain in complex with the high affinity peptide VSL12
Descriptor: GLYCEROL, NICKEL (II) ION, Proto-oncogene tyrosine-protein kinase Src, ...
Authors:Camara-Artigas, A, Bacarizo, J.
Deposit date:2014-11-16
Release date:2015-10-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.979 Å)
Cite:Crystal structure of the c-Src-SH3 domain in complex with the high affinity peptide VSL12
To be Published
5HMV
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BU of 5hmv by Molmil
Re refinement of 4mwk.
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Lysozyme C, ...
Authors:Helliwell, J.R.
Deposit date:2016-01-17
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Comment on "Structural dynamics of cisplatin binding to histidine in a protein" [Struct. Dyn. 1, 034701 (2014)].
Struct Dyn, 3, 2016
1S5M
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BU of 1s5m by Molmil
Xylose Isomerase in Substrate and Inhibitor Michaelis States: Atomic Resolution Studies of a Metal-Mediated Hydride Shift
Descriptor: MANGANESE (II) ION, SODIUM ION, Xylose isomerase, ...
Authors:Fenn, T.D, Ringe, D, Petsko, G.A.
Deposit date:2004-01-21
Release date:2004-02-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Xylose isomerase in substrate and inhibitor michaelis States: atomic resolution studies of a metal-mediated hydride shift(,).
Biochemistry, 43, 2004
5KXV
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BU of 5kxv by Molmil
Structure Proteinase K at 0.98 Angstroms
Descriptor: CALCIUM ION, GLYCEROL, NITRATE ION, ...
Authors:Masuda, T, Suzuki, M, Inoue, S, Numata, K, Sugahara, M.
Deposit date:2016-07-20
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Atomic resolution structure of serine protease proteinase K at ambient temperature.
Sci Rep, 7, 2017
4KXU
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BU of 4kxu by Molmil
Human transketolase in covalent complex with donor ketose D-fructose-6-phosphate
Descriptor: 1,2-ETHANEDIOL, D-SORBITOL-6-PHOSPHATE, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
7OYN
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BU of 7oyn by Molmil
Carbonic anhydrase II in complex with Hit3 (MH57)
Descriptor: Carbonic anhydrase 2, Hit3 (MH57), ZINC ION
Authors:Kugler, M, Brynda, J, Rezacova, P.
Deposit date:2021-06-24
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Identification of specific carbonic anhydrase inhibitors via in situ click chemistry, phage-display and synthetic peptide libraries: comparison of the methods and structural study.
Rsc Med Chem, 14, 2023
7OYM
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BU of 7oym by Molmil
Carbonic anhydrase II in complex with Hit2 (MH65)
Descriptor: Carbonic anhydrase 2, Hit2 (MH65), ZINC ION
Authors:Kugler, M, Brynda, J, Rezacova, P.
Deposit date:2021-06-24
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Identification of specific carbonic anhydrase inhibitors via in situ click chemistry, phage-display and synthetic peptide libraries: comparison of the methods and structural study.
Rsc Med Chem, 14, 2023
7YZ7
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BU of 7yz7 by Molmil
Crystal structure of the zebrafish FoxH1 bound to the TGTGGATT site
Descriptor: DNA (5'-D(*AP*GP*AP*TP*TP*GP*TP*GP*GP*AP*TP*TP*GP*AP*GP*A)-3'), DNA (5'-D(*TP*CP*TP*CP*AP*AP*TP*CP*CP*AP*CP*AP*AP*TP*CP*T)-3'), Forkhead box protein H1, ...
Authors:Pluta, R, Macias, M.J.
Deposit date:2022-02-18
Release date:2022-11-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Molecular basis for DNA recognition by the maternal pioneer transcription factor FoxH1.
Nat Commun, 13, 2022
6TX6
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BU of 6tx6 by Molmil
CRYSTAL STRUCTURE OF HUMAN FKBP51 FK1 DOMAIN A19T MUTANT IN COMPLEX WITH NICOTINAMIDE
Descriptor: CHLORIDE ION, NICOTINAMIDE, Peptidyl-prolyl cis-trans isomerase FKBP5, ...
Authors:Fiegen, D, Draxler, S.W.
Deposit date:2020-01-13
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Hybrid Screening Approach for Very Small Fragments: X-ray and Computational Screening on FKBP51.
J.Med.Chem., 63, 2020
7PMT
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BU of 7pmt by Molmil
Human Cyclophilin D in complex with N-[(5-ethyl-4-oxo-1,2,3,4,5,6- hexahydro-1,5-benzodiazocin-8-yl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
Descriptor: DIMETHYL SULFOXIDE, Peptidyl-prolyl cis-trans isomerase F, mitochondrial, ...
Authors:Silva, D.O, Graedler, U, Bandeiras, T.M.
Deposit date:2021-09-02
Release date:2022-09-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Human Cyclophilin D in complex with N-[(4-aminophenyl)methyl]-7-methyl-2-oxo-1H,2H-pyrazolo[1,5-a]pyrimidine-6-carboxamide
To Be Published
1IXH
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BU of 1ixh by Molmil
PHOSPHATE-BINDING PROTEIN (PBP) COMPLEXED WITH PHOSPHATE
Descriptor: PHOSPHATE ION, PHOSPHATE-BINDING PROTEIN
Authors:Wang, Z, Luecke, H, Quiocho, F.A.
Deposit date:1996-08-01
Release date:1998-02-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:A low energy short hydrogen bond in very high resolution structures of protein receptor--phosphate complexes.
Nat.Struct.Biol., 4, 1997
5MB5
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BU of 5mb5 by Molmil
Cocktail experiment C: fragments 103 and 171 in complex with Endothiapepsin
Descriptor: 4-methyl-5-(1-methyl-1H-imidazol-2-yl)-1,3-thiazol-2-amine, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Radeva, N, Heine, A, Klebe, G.
Deposit date:2016-11-07
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Comparison of cocktails versus single soaking experiments
To Be Published
5XJZ
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BU of 5xjz by Molmil
Structure of DNA1-Ag complex
Descriptor: DNA (5'-D(*GP*CP*AP*CP*GP*CP*GP*C)-3'), SILVER ION, SPERMINE
Authors:Liu, H.H, Gan, J.H.
Deposit date:2017-05-04
Release date:2017-12-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:A DNA Structure Containing AgI -Mediated G:G and C:C Base Pairs
Angew. Chem. Int. Ed. Engl., 56, 2017
5MNM
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BU of 5mnm by Molmil
Cationic trypsin in complex with benzylamine (at 295 K)
Descriptor: BENZYLAMINE, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Heine, A, Klebe, G.
Deposit date:2016-12-13
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Cationic trypsin in complex with benzylamine (at 295 K)
to be published
5MOR
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BU of 5mor by Molmil
Joint X-ray/neutron structure of cationic trypsin in complex with benzylamine
Descriptor: (phenylmethyl)azanium, CALCIUM ION, Cationic trypsin, ...
Authors:Schiebel, J, Schrader, T.E, Ostermann, A, Heine, A, Klebe, G.
Deposit date:2016-12-14
Release date:2018-02-28
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (0.98 Å), X-RAY DIFFRACTION
Cite:Joint X-ray/neutron structure of cationic trypsin in complex with benzylamine
to be published
4QBX
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BU of 4qbx by Molmil
Human Aldose Reductase complexed with a ligand with an IDD structure ({5-fluoro-2-[(3-nitrobenzyl)carbamoyl]phenoxy}acetic acid) at 0.98 A
Descriptor: Aldose reductase, CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Rechlin, C, Heine, A, Klebe, G.
Deposit date:2014-05-09
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Aldose Reductase: How expensive is the opening of the specificity pocket? IDD ligands under investigation
To be Published
2NLS
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BU of 2nls by Molmil
Human beta-defensin-1 (Mutant Gln24Ala)
Descriptor: Beta-defensin 1
Authors:Lubkowski, J, Pazgier, M.
Deposit date:2006-10-20
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Studies of the Biological Properties of Human beta-Defensin 1.
J.Biol.Chem., 282, 2007
7AVE
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BU of 7ave by Molmil
Perdeuterated refolded hen egg-white lysozyme at 100 K
Descriptor: ACETATE ION, Lysozyme C, NITRATE ION
Authors:Ramos, J, Laux, V, Haertlein, M, Erba Boeri, E, Forsyth, V.T, Larsen, S, Mossou, E, Langkilde, A.E.
Deposit date:2020-11-05
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structural insights into protein folding, stability and activity using in vivo perdeuteration of hen egg-white lysozyme.
Iucrj, 8, 2021
6LIP
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BU of 6lip by Molmil
Crystal structure of NDM-1 in complex with D-captopril derivative wss0218
Descriptor: (2R)-1-[3-sulfanyl-2-(sulfanylmethyl)propanoyl]pyrrolidine-2-carboxylic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Zhang, H, Ma, G.
Deposit date:2019-12-12
Release date:2020-12-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structure-guided optimization of D-captopril for discovery of potent NDM-1 inhibitors.
Bioorg.Med.Chem., 29, 2020
3AZD
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BU of 3azd by Molmil
Crystal structure of tropomyosin N-terminal fragment at 0.98A resolution
Descriptor: short alpha-tropomyosin,transcription factor GCN4
Authors:Meshcheryakov, V.A, Krieger, I, Kostyukova, A.S, Samatey, F.A.
Deposit date:2011-05-23
Release date:2011-10-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Structure of a tropomyosin N-terminal fragment at 0.98 A resolution
Acta Crystallogr.,Sect.D, 67, 2011
3JUD
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BU of 3jud by Molmil
Human gamma-glutamylamine cyclotransferase, E82Q mutant
Descriptor: AIG2-like domain-containing protein 1, NITRATE ION
Authors:Oakley, A.J.
Deposit date:2009-09-15
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Identification and characterization of {gamma}-glutamylamine cyclotransferase: An enzyme responsible for {gamma}-glutamyl-{epsilon}-lysine catabolism
J.Biol.Chem., 285, 2010
5XR0
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BU of 5xr0 by Molmil
Crystal structure of Notched-fin eelpout type III antifreeze protein A20T mutant (NFE6, AFP), P21 form
Descriptor: Ice-structuring protein
Authors:Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S.
Deposit date:2017-06-07
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4YEO
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BU of 4yeo by Molmil
Triclinic HEWL co-crystallised with cisplatin, studied at a data collection temperature of 150K - new refinement
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cisplatin, ...
Authors:Shabalin, I.G, Dauter, Z, Jaskolski, M, Minor, W, Wlodawer, A.
Deposit date:2015-02-24
Release date:2015-03-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Crystallography and chemistry should always go together: a cautionary tale of protein complexes with cisplatin and carboplatin.
Acta Crystallogr.,Sect.D, 71, 2015
8V56
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BU of 8v56 by Molmil
UIC-1 mutant - UIC-1-B5W
Descriptor: UIC-1-B5W
Authors:Heinz-Kunert, S.L.
Deposit date:2023-11-30
Release date:2024-03-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Pore Restructuring of Peptide Frameworks by Mutations at Distal Packing Residues.
Biomacromolecules, 25, 2024

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