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4O9K
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Crystal structure of the CBS pair of a putative D-arabinose 5-phosphate isomerase from Methylococcus capsulatus in complex with CMP-Kdo
Descriptor: Arabinose 5-phosphate isomerase, CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID, GLYCEROL
Authors:Shabalin, I.G, Cooper, D.R, Shumilin, I.A, Zimmerman, M.D, Majorek, K.A, Hammonds, J, Hillerich, B.S, Nawar, A, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-01-02
Release date:2014-01-22
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and kinetic properties of D-arabinose 5-phosphate isomerase from Methylococcus capsulatus
To be Published
4O9X
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BU of 4o9x by Molmil
Crystal Structure of TcdB2-TccC3
Descriptor: MERCURY (II) ION, TcdB2, TccC3
Authors:Meusch, D, Gatsogiannis, C, Efremov, R.G, Lang, A.E, Hofnagel, O, Vetter, I.R, Aktories, K, Raunser, S.
Deposit date:2014-01-03
Release date:2014-02-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Mechanism of Tc toxin action revealed in molecular detail.
Nature, 508, 2014
3EIU
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BU of 3eiu by Molmil
A second transient position of ATP on its trail to the nucleotide-binding site of subunit B of the motor protein A1Ao ATP synthase
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ADENOSINE-5'-TRIPHOSPHATE, V-type ATP synthase beta chain
Authors:Manimekalai, S.M.S, Kumar, A, Balakrishna, A.M, Gruber, G.
Deposit date:2008-09-17
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:A second transient position of ATP on its trail to the nucleotide-binding site of subunit B of the motor protein A(1)A(O) ATP synthase
J.Struct.Biol., 166, 2009
3E3K
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BU of 3e3k by Molmil
Structural characterization of a putative endogenous metal chelator in the periplasmic nickel transporter NikA (butane-1,2,4-tricarboxylate without nickel form)
Descriptor: (2R)-butane-1,2,4-tricarboxylic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Cherrier, M.V, Cavazza, C, Bochot, C, Lemaire, D, Fontecilla-Camps, J.C.
Deposit date:2008-08-07
Release date:2008-09-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural characterization of a putative endogenous metal chelator in the periplasmic nickel transporter NikA
Biochemistry, 47, 2008
3V5X
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BU of 3v5x by Molmil
Structure of FBXL5 hemerythrin domain, C2 cell
Descriptor: F-box/LRR-repeat protein 5, MU-OXO-DIIRON
Authors:Tomchick, D.R, Bruick, R.K, Thompson, J.W, Brautigam, C.A.
Deposit date:2011-12-17
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Molecular Characterization of Iron-sensing Hemerythrin-like Domain within F-box and Leucine-rich Repeat Protein 5 (FBXL5).
J.Biol.Chem., 287, 2012
3V9O
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BU of 3v9o by Molmil
Crystal structure of Dihydroneopterin aldolase (BTH_I0291) from Burkholderia thailendensis bound to guanine.
Descriptor: 1,2-ETHANEDIOL, Dihydroneopterin aldolase, GUANINE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-12-27
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
3E57
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BU of 3e57 by Molmil
Crystal structure of Tm1382, a putative Nudix hydrolase
Descriptor: uncharacterized protein Tm1382
Authors:Choi, W, Cooper, D.R, Derewenda, Z.S, Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2008-08-13
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of Tm1382, a putative Nudix hydrolase
To be Published
4OGF
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BU of 4ogf by Molmil
Crystal Structure of Human DJ-1 with glyoxylate as substrate analog
Descriptor: Protein DJ-1
Authors:Choi, D, Kim, J, Ryu, K.-S, Park, C.
Deposit date:2014-01-16
Release date:2014-10-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stereospecific mechanism of DJ-1 glyoxalases inferred from their hemithioacetal-containing crystal structures.
Febs J., 281, 2014
3E5T
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BU of 3e5t by Molmil
Crystal Structure Analysis of FP611
Descriptor: Red fluorescent protein eqFP611
Authors:Nar, H, Nienhaus, K, Nienhaus, U, Wiedenmann, J.
Deposit date:2008-08-14
Release date:2008-09-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Trans-cis isomerization is responsible for the red-shifted fluorescence in variants of the red fluorescent protein eqFP611.
J.Am.Chem.Soc., 130, 2008
3EMM
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BU of 3emm by Molmil
X-ray structure of protein from Arabidopsis thaliana AT1G79260 with Bound Heme
Descriptor: 1,2-ETHANEDIOL, PROTOPORPHYRIN IX CONTAINING FE, Uncharacterized protein At1g79260
Authors:Bianchetti, C.M, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2008-09-24
Release date:2008-10-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.358 Å)
Cite:The structure and NO binding properties of the nitrophorin-like heme-binding protein from Arabidopsis thaliana gene locus At1g79260.1.
Proteins, 78, 2010
3E7C
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BU of 3e7c by Molmil
Glucocorticoid Receptor LBD bound to GSK866
Descriptor: 5-amino-N-[(2S)-2-({[(2,6-dichlorophenyl)carbonyl](ethyl)amino}methyl)-3,3,3-trifluoro-2-hydroxypropyl]-1-(4-fluorophenyl)-1H-pyrazole-4-carboxamide, GLYCEROL, Glucocorticoid receptor, ...
Authors:Madauss, K.P, Williams, S.P, Mclay, I, Stewart, E.L, Bledsoe, R.K.
Deposit date:2008-08-18
Release date:2008-11-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The first X-ray crystal structure of the glucocorticoid receptor bound to a non-steroidal agonist.
Bioorg.Med.Chem.Lett., 18, 2008
3V9K
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BU of 3v9k by Molmil
Crystal structure of mouse 1-pyrroline-5-carboxylate dehydrogenase complexed with the product glutamate
Descriptor: Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial, GLUTAMIC ACID, ...
Authors:Tanner, J.J, Srivastava, D.
Deposit date:2011-12-27
Release date:2012-05-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:The Three-Dimensional Structural Basis of Type II Hyperprolinemia.
J.Mol.Biol., 420, 2012
3E3P
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BU of 3e3p by Molmil
Glycogen synthase kinase from Leishmania major
Descriptor: Protein kinase, putative Glycogen synthase kinase
Authors:Arakaki, T.L, Merritt, E.A.
Deposit date:2008-08-07
Release date:2008-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glycogen synthase kinase from Leishmania major
To be Published
3VF1
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BU of 3vf1 by Molmil
Structure of a calcium-dependent 11R-lipoxygenase suggests a mechanism for Ca-regulation
Descriptor: 11R-lipoxygenase, FE (II) ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Eek, P, Jarving, R, Jarving, I, Gilbert, N.C, Newcomer, M.E, Samel, N.
Deposit date:2012-01-09
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.473 Å)
Cite:Structure of a Calcium-dependent 11R-Lipoxygenase Suggests a Mechanism for Ca2+ Regulation.
J.Biol.Chem., 287, 2012
3E86
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BU of 3e86 by Molmil
High resolution Crystal Structure of the open NaK channel pore
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CESIUM ION, ...
Authors:Jiang, Y, Alam, A.
Deposit date:2008-08-19
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structure of the open NaK channel
Nat.Struct.Mol.Biol., 16, 2009
3E4B
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BU of 3e4b by Molmil
Crystal structure of AlgK from Pseudomonas fluorescens WCS374r
Descriptor: AlgK, CHLORIDE ION, GLYCEROL
Authors:Keiski, C.-L, Harwich, M, Jain, S, Neculai, A.M, Yip, P, Robinson, H, Whitney, J.C, Burrows, L.L, Ohman, D.E, Howell, P.L.
Deposit date:2008-08-11
Release date:2009-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:AlgK is a TPR-containing protein and the periplasmic component of a novel exopolysaccharide secretin.
Structure, 18, 2010
4OLR
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BU of 4olr by Molmil
[Leu-5]-Enkephalin mutant - YVVFV
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, [Leu-5]-Enkephalin mutant - YVVFV
Authors:Sangwan, S, Eisenberg, D, Sawaya, M.R, Do, T.D, Bowers, M.T, Lapointe, N.E, Teplow, D.B, Feinstein, S.C.
Deposit date:2014-01-24
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Factors that drive Peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.
J.Phys.Chem.B, 118, 2014
3E8F
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BU of 3e8f by Molmil
Crystal Structure of the the open NaK channel- K+/Ba2+
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BARIUM ION, POTASSIUM ION, ...
Authors:Jiang, Y, Alam, A.
Deposit date:2008-08-19
Release date:2008-12-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of ion selectivity in the NaK channel
Nat.Struct.Mol.Biol., 16, 2009
3VBE
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BU of 3vbe by Molmil
Crystal structure of beta-cyanoalanine synthase in soybean
Descriptor: PYRIDOXAL-5'-PHOSPHATE, beta-cyanoalnine synthase
Authors:Yi, H, Jez, J.M.
Deposit date:2012-01-02
Release date:2012-09-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Soybean beta-Cyanoalanine Synthase and the Molecular Basis for Cyanide Detoxification in Plants.
Plant Cell, 24, 2012
3E7B
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BU of 3e7b by Molmil
Crystal Structure of Protein Phosphatase-1 Bound to the natural toxin inhibitor Tautomycin
Descriptor: (2Z)-2-[(1R)-3-{[(1R,2S,3R,6S,7S,10R)-10-{(2S,3S,6R,8S,9R)-3,9-dimethyl-8-[(3S)-3-methyl-4-oxopentyl]-1,7-dioxaspiro[5.5]undec-2-yl}-3,7-dihydroxy-2-methoxy-6-methyl-1-(1-methylethyl)-5-oxoundecyl]oxy}-1-hydroxy-3-oxopropyl]-3-methylbut-2-enedioic acid, AZIDE ION, CHLORIDE ION, ...
Authors:Kelker, M.S, Page, R, Peti, W.
Deposit date:2008-08-18
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of protein phosphatase-1 bound to nodularin-R and tautomycin: a novel scaffold for structure-based drug design of serine/threonine phosphatase inhibitors
J.Mol.Biol., 385, 2009
4OO8
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BU of 4oo8 by Molmil
Crystal structure of Streptococcus pyogenes Cas9 in complex with guide RNA and target DNA
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA (5'-D(*CP*CP*AP*GP*CP*CP*AP*AP*GP*CP*GP*CP*AP*CP*CP*TP*AP*AP*TP*TP*TP*CP*C)-3'), RNA (97-MER)
Authors:Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2014-01-31
Release date:2014-02-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Cas9 in complex with guide RNA and target DNA
Cell(Cambridge,Mass.), 156, 2014
3VF2
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BU of 3vf2 by Molmil
Crystal structure of the O-carbamoyltransferase TobZ M473I variant in complex with carbamoyl phosphate and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FE (II) ION, O-carbamoyltransferase TobZ, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3EES
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BU of 3ees by Molmil
Structure of the RNA pyrophosphohydrolase BdRppH
Descriptor: Probable pyrophosphohydrolase
Authors:Messing, S.A, Gabelli, S.B, Amzel, L.M.
Deposit date:2008-09-05
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Biological Function of the RNA Pyrophosphohydrolase BdRppH from Bdellovibrio bacteriovorus.
Structure, 17, 2009
4OTG
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BU of 4otg by Molmil
Crystal Structure of PRK1 Catalytic Domain in Complex with Lestaurtinib
Descriptor: Lestaurtinib, Serine/threonine-protein kinase N1
Authors:Chamberlain, P.P, Delker, S, Pagarigan, B, Mahmoudi, A, Jackson, P, Abbassian, M, Muir, J, Raheja, N, Cathers, B.
Deposit date:2014-02-13
Release date:2014-08-27
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of PRK1 in Complex with the Clinical Compounds Lestaurtinib and Tofacitinib Reveal Ligand Induced Conformational Changes.
Plos One, 9, 2014
3VPL
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Crystal structure of a 2-fluoroxylotriosyl complex of the Vibrio sp. AX-4 Beta-1,3-xylanase
Descriptor: 3,4-dinitrophenol, Beta-1,3-xylanase XYL4, beta-D-xylopyranose-(1-3)-beta-D-xylopyranose-(1-3)-2-deoxy-2-fluoro-beta-D-xylopyranose, ...
Authors:Watanabe, N, Sakaguchi, K.
Deposit date:2012-03-05
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The crystal structure of a 2-fluoroxylotriosyl complex of the Vibrio sp. AX-4 beta-1,3-xylanase at 1.2 A resolution
To be Published

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