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6VLJ
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BU of 6vlj by Molmil
Solution NMR of Prochlorosin 2.8 produced by Prochlorococcus MIT 9313
Descriptor: Prochlorosin 2.8
Authors:Bobeica, S.C, Acedo, J.Z, van der Donk, W.A, Zhu, L.
Deposit date:2020-01-24
Release date:2020-07-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural determinants of macrocyclization in substrate-controlled lanthipeptide biosynthetic pathways.
Chem Sci, 11, 2020
11AS
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BU of 11as by Molmil
ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE
Descriptor: ASPARAGINE, ASPARAGINE SYNTHETASE
Authors:Nakatsu, T, Kato, H, Oda, J.
Deposit date:1997-12-02
Release date:1998-12-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase.
Nat.Struct.Biol., 5, 1998
6W2M
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BU of 6w2m by Molmil
Abortive ternary complex crystal structure of DNA polymerase Beta with 8OG-dC base pair at the primer terminus and flipped out dA
Descriptor: CHLORIDE ION, DNA polymerase beta, Downstream Primer Strand, ...
Authors:Batra, V.K, Wilson, S.H.
Deposit date:2020-03-06
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structure of a DNA polymerase abortive complex with the 8OG:dA base pair at the primer terminus.
Commun Biol, 3, 2020
4DOM
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BU of 4dom by Molmil
Crystal Structure of the TIR-domain of Human Myeloid Differentiation Primary Response protein (MyD88)
Descriptor: Myeloid differentiation primary response protein MyD88
Authors:Jiang, J.S, Snyder, G.A, Xiao, T.
Deposit date:2012-02-09
Release date:2013-04-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Molecular mechanisms for the subversion of MyD88 signaling by TcpC from virulent uropathogenic Escherichia coli.
Proc.Natl.Acad.Sci.USA, 110, 2013
4MJO
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BU of 4mjo by Molmil
Human liver fructose-1,6-bisphosphatase(d-fructose-1,6-bisphosphate, 1-phosphohydrolase) (e.c.3.1.3.11) complexed with the allosteric inhibitor 3
Descriptor: Fructose-1,6-bisphosphatase 1, N-({4-bromo-6-[(methylcarbamoyl)amino]pyridin-2-yl}carbamoyl)-5-(2-methoxyethyl)-4-methylthiophene-2-sulfonamide
Authors:Ruf, A, Joseph, C, Tetaz, T, Benz, J.
Deposit date:2013-09-04
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Determination of protein-ligand binding constants of a cooperatively regulated tetrameric enzyme using electrospray mass spectrometry.
Acs Chem.Biol., 9, 2014
4MM1
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BU of 4mm1 by Molmil
GGGPS from Methanothermobacter thermautotrophicus
Descriptor: Geranylgeranylglyceryl phosphate synthase, SN-GLYCEROL-1-PHOSPHATE, TRIETHYLENE GLYCOL
Authors:Rajendran, C, Peterhoff, D, Beer, B, Kumpula, E.P, Kapetaniou, E, Guldan, H, Wierenga, R.K, Sterner, R, Babinger, P.
Deposit date:2013-09-07
Release date:2014-06-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8004 Å)
Cite:A comprehensive analysis of the geranylgeranylglyceryl phosphate synthase enzyme family identifies novel members and reveals mechanisms of substrate specificity and quaternary structure organization.
Mol.Microbiol., 92, 2014
6VYN
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BU of 6vyn by Molmil
N-terminal domain of mouse surfactant protein B with bound lipid, wild type
Descriptor: (7Z,19R,22R)-25-amino-22-hydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphapentacos-7-en-19-yl (9Z)-octadec-9-enoate, Pulmonary surfactant-associated protein B
Authors:Rapoport, T.A, Bodnar, N.O.
Deposit date:2020-02-27
Release date:2020-11-25
Last modified:2021-01-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Lamellar Body Formation by Lung Surfactant Protein B.
Mol.Cell, 81, 2021
12AS
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BU of 12as by Molmil
ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE AND AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ASPARAGINE, ASPARAGINE SYNTHETASE
Authors:Nakatsu, T, Kato, H, Oda, J.
Deposit date:1997-12-02
Release date:1998-12-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase.
Nat.Struct.Biol., 5, 1998
1B2P
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BU of 1b2p by Molmil
NATIVE MANNOSE-SPECIFIC BULB LECTIN FROM SCILLA CAMPANULATA (BLUEBELL) AT 1.7 ANGSTROMS RESOLUTION
Descriptor: PROTEIN (LECTIN)
Authors:Wood, S.D, Wright, L.M, Reynolds, C.D, Rizkallah, P.J, Allen, A.K, Peumans, W.J, Van Damme, E.J.M.
Deposit date:1998-11-30
Release date:1999-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the native (unligated) mannose-specific bulb lectin from Scilla campanulata (bluebell) at 1.7 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
6R86
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BU of 6r86 by Molmil
Yeast Vms1-60S ribosomal subunit complex (post-state)
Descriptor: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
Deposit date:2019-03-31
Release date:2019-07-31
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
8IPA
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BU of 8ipa by Molmil
Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide
Descriptor: 18S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, 40S ribosomal protein eL8, ...
Authors:Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
Deposit date:2023-03-14
Release date:2024-02-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
6R87
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BU of 6r87 by Molmil
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
Deposit date:2019-03-31
Release date:2019-06-26
Last modified:2019-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
4U1R
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BU of 4u1r by Molmil
ATP-bound structure of human platelet phosphofructokinase in an R-state, crystal form II
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, platelet type, ...
Authors:Kloos, M, Straeter, N.
Deposit date:2014-07-16
Release date:2015-06-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human platelet phosphofructokinase-1 locked in an activated conformation.
Biochem.J., 469, 2015
6R84
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BU of 6r84 by Molmil
Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Su, T, Izawa, T, Cheng, J, Yamashita, Y, Berninghausen, O, Inada, T, Neupert, W, Beckmann, R.
Deposit date:2019-03-31
Release date:2019-06-26
Last modified:2019-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure and function of Vms1 and Arb1 in RQC and mitochondrial proteome homeostasis.
Nature, 570, 2019
8BNY
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BU of 8bny by Molmil
Structure of the tetramerization domain of pLS20 conjugation repressor Rco
Descriptor: CHLORIDE ION, Immunity repressor protein
Authors:Bernardo, N, Crespo, I, Meijer, W.J.J, Boer, D.R.
Deposit date:2022-11-14
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.429 Å)
Cite:A tetramerization domain in prokaryotic and eukaryotic transcription regulators homologous to p53.
Acta Crystallogr D Struct Biol, 79, 2023
2OHX
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BU of 2ohx by Molmil
REFINED CRYSTAL STRUCTURE OF LIVER ALCOHOL DEHYDROGENASE-NADH COMPLEX AT 1.8 ANGSTROMS RESOLUTION
Descriptor: ALCOHOL DEHYDROGENASE, DIMETHYL SULFOXIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Al-Karadaghi, S, Cedergren-Zeppezauer, E.S.
Deposit date:1993-08-24
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined crystal structure of liver alcohol dehydrogenase-NADH complex at 1.8 A resolution.
Acta Crystallogr.,Sect.D, 50, 1994
6YBS
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BU of 6ybs by Molmil
Structure of a human 48S translational initiation complex - head
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ...
Authors:Brito Querido, J, Sokabe, M, Kraatz, S, Gordiyenko, Y, Skehel, M, Fraser, C, Ramakrishnan, V.
Deposit date:2020-03-17
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of a human 48Stranslational initiation complex.
Science, 369, 2020
8CK3
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BU of 8ck3 by Molmil
STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-(3,5-Difluoro-phenyl)-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol
Descriptor: (4~{S})-1-[3,5-bis(fluoranyl)phenyl]-5,5-bis(fluoranyl)-3-methylsulfonyl-4,6-dihydrocyclopenta[c]thiophen-4-ol, Aryl hydrocarbon receptor nuclear translocator, DIMETHYL SULFOXIDE, ...
Authors:Musil, D, Lehmannn, M, Diehl, L.
Deposit date:2023-02-14
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.707 Å)
Cite:Discovery of Cycloalkyl[ c ]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2 alpha Inhibitors.
J.Med.Chem., 66, 2023
8CK8
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BU of 8ck8 by Molmil
STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-Cyclohexyloxy-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol
Descriptor: (4~{S})-1-cyclohexyloxy-5,5-bis(fluoranyl)-3-methylsulfonyl-4,6-dihydrocyclopenta[c]thiophen-4-ol, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
Authors:Musil, D.
Deposit date:2023-02-14
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Discovery of Cycloalkyl[ c ]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2 alpha Inhibitors.
J.Med.Chem., 66, 2023
8CK4
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BU of 8ck4 by Molmil
STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (4S)-1-(3,5-difluorophenyl)-5,5-difluoro-3-methanesulfonyl-4,5,6,7-tetrahydro-2-benzothiophen-4-ol
Descriptor: (4~{S})-1-[3,5-bis(fluoranyl)phenyl]-5,5-bis(fluoranyl)-3-methylsulfonyl-6,7-dihydro-4~{H}-2-benzothiophen-4-ol, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
Authors:Musil, D.
Deposit date:2023-02-14
Release date:2023-07-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Discovery of Cycloalkyl[ c ]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2 alpha Inhibitors.
J.Med.Chem., 66, 2023
1AI8
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BU of 1ai8 by Molmil
HUMAN ALPHA-THROMBIN TERNARY COMPLEX WITH THE EXOSITE INHIBITOR HIRUGEN AND ACTIVE SITE INHIBITOR PHCH2OCO-D-DPA-PRO-BOROMPG
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), HIRUDIN IIIB, ...
Authors:Skordalakes, E, Dodson, G, Elgendy, S, Goodwin, C.A, Green, D, Tyrrel, R, Scully, M.F, Freyssinet, J, Kakkar, V.V, Deadman, J.
Deposit date:1997-05-01
Release date:1997-10-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The refined 1.9-A X-ray crystal structure of D-Phe-Pro-Arg chloromethylketone-inhibited human alpha-thrombin: structure analysis, overall structure, electrostatic properties, detailed active-site geometry, and structure-function relationships.
Protein Sci., 1, 1992
5CA7
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BU of 5ca7 by Molmil
Human DNA polymerase lambda- MgdGTP binary and complex with 6 paired DNA
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Liu, M.S, Tsai, M.D.
Deposit date:2015-06-29
Release date:2016-02-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Structural Mechanism for the Fidelity Modulation of DNA Polymerase lambda
J.Am.Chem.Soc., 138, 2016
5I1E
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BU of 5i1e by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-53/IGKV1-39
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN, GLYCEROL, ...
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-06-08
Last modified:2016-08-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016
5I1H
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BU of 5i1h by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-53/IGKV3-20
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN, SULFATE ION
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-06-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016
5I18
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BU of 5i18 by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV1-69/IGKV4-1
Descriptor: FAB HEAVY CHAIN, FAB LIGHT CHAIN, GLYCEROL
Authors:Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
Deposit date:2016-02-05
Release date:2016-02-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural diversity in a human antibody germline library.
Mabs, 8, 2016

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