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1MBJ	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 Descriptor: MYB PROTO-ONCOGENE PROTEIN Authors: Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. Deposit date: 1995-05-19 Release date: 1995-07-31 Last modified: 2024-06-05 Method: SOLUTION NMR Cite: Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
1MBG	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2 Descriptor: MYB PROTO-ONCOGENE PROTEIN Authors: Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. Deposit date: 1995-05-19 Release date: 1995-07-31 Last modified: 2024-06-05 Method: SOLUTION NMR Cite: Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
4FBT	Dpo4 post-insertion complex with the N-(deoxyguanosin-8-yl)-1-aminopyrene lesion Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase IV, ... Authors: Kirouac, K, Ling, H. Deposit date: 2012-05-23 Release date: 2013-06-12 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural mechanism of replication stalling on a bulky amino-polycyclic aromatic hydrocarbon DNA adduct by a y family DNA polymerase. J.Mol.Biol., 425, 2013
1MBK	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 Descriptor: MYB PROTO-ONCOGENE PROTEIN Authors: Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. Deposit date: 1995-05-19 Release date: 1995-07-31 Last modified: 2024-06-05 Method: SOLUTION NMR Cite: Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
4P0Y	Structure of the double stranded DNA binding type IV secretion protein TraN from Enterococcus Descriptor: AM32 Authors: Goessweiner-mohr, N, Fercher, C, Keller, W. Deposit date: 2014-02-23 Release date: 2014-07-30 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structure of the double-stranded DNA-binding type IV secretion protein TraN from Enterococcus. Acta Crystallogr.,Sect.D, 70, 2014
2YPF	Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism Descriptor: 5'-D(*TP*AP*GP*AP*GP*GP*GP*TP*TP*AP*GP*GP*TP*TP *TP*AP*TP*AP*TP*AP*AP)-3', 5'-D(*TP*TP*TP*AP*TP*AP*TP*AP*AP*AP*CP*CP*TP*AP *AP*CP*CP*CP*TP*CP*TP*AP)-3', AVRBS3 Authors: Stella, S, Molina, R, Yefimenko, I, Prieto, J, Silva, G.H, Bertonati, C, Juillerat, A, Duchateau, P, Montoya, G. Deposit date: 2012-10-30 Release date: 2013-08-28 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Structure of the Avrbs3-DNA Complex Provides New Insights Into the Initial Thymine-Recognition Mechanism Acta Crystallogr.,Sect.D, 69, 2013
7OZ3	S. agalactiae BusR in complex with its busA-promotor DNA Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, GntR family transcriptional regulator, pBusA_for, ... Authors: Bandera, A.M, Witte, G. Deposit date: 2021-06-25 Release date: 2021-08-11 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (4.46 Å) Cite: BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture. Nucleic Acids Res., 49, 2021
5F9N	CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dCMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N2-ETHENODEOXYGUANOSINE LESION Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(GNE)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ... Authors: Patra, A, Egli, M. Deposit date: 2015-12-09 Release date: 2016-12-21 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.23 Å) Cite: Bypass of the 1, N2-Ethenodeoxyguanosine Lesion by Human DNA Polymerase Eta To Be Published
4DUL	ANAC019 NAC domain crystal form IV Descriptor: NAC domain-containing protein 19 Authors: Lo Leggio, L, Helgstrand, C, Welner, D, Olsen, A.N, Skriver, K. Deposit date: 2012-02-22 Release date: 2012-04-11 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3 Å) Cite: DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. Biochem.J., 444, 2012
4K2J	Decameric ring structure of KSHV (HHV-8) latency-associated nuclear antigen (LANA) DNA binding domain Descriptor: CHLORIDE ION, FORMIC ACID, KSHV (HHV-8) latency-associated nuclear antigen (LANA) Authors: Domsic, J.F, Marmorstein, R. Deposit date: 2013-04-09 Release date: 2013-11-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Molecular Basis for Oligomeric-DNA Binding and Episome Maintenance by KSHV LANA. Plos Pathog., 9, 2013
1RXR	HIGH RESOLUTION SOLUTION STRUCTURE OF THE RETINOID X RECEPTOR DNA BINDING DOMAIN, NMR, 20 STRUCTURE Descriptor: RETINOIC ACID RECEPTOR-ALPHA, ZINC ION Authors: Holmbeck, S.M.A, Foster, M.P, Casimiro, D.R, Sem, D.S, Dyson, H.J, Wright, P.E. Deposit date: 1998-06-12 Release date: 1998-11-11 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: High-resolution solution structure of the retinoid X receptor DNA-binding domain. J.Mol.Biol., 281, 1998
4BWJ	KlenTaq mutant in complex with DNA and ddCTP Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP)-3', 5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOCP)-3', ... Authors: Blatter, N, Bergen, K, Welte, W, Diederichs, K, Marx, A. Deposit date: 2013-07-03 Release date: 2013-09-18 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Structure and Function of an RNA-Reading Thermostable DNA Polymerase. Angew.Chem.Int.Ed.Engl., 52, 2013
2KKF	Solution structure of MLL CXXC domain in complex with palindromic CPG DNA Descriptor: 5'-D(*CP*CP*CP*TP*GP*CP*GP*CP*AP*GP*GP*G)-3', Histone-lysine N-methyltransferase HRX, ZINC ION Authors: Cierpicki, T, Riesbeck, J.E, Grembecka, J.E, Lukasik, S.M, Popovic, R, Omonkowska, M, Shultis, D.S, Zeleznik-Le, N.J, Bushweller, J.H. Deposit date: 2009-06-18 Release date: 2009-12-08 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of the MLL CXXC domain-DNA complex and its functional role in MLL-AF9 leukemia. Nat.Struct.Mol.Biol., 17, 2010
4S0N	Crystal Structure of HLTF HIRAN Domain bound to DNA Descriptor: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', GLYCEROL, Helicase-like transcription factor, ... Authors: Chavez, D.A, Eichman, B.F. Deposit date: 2015-01-02 Release date: 2015-05-27 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.501 Å) Cite: HLTF's Ancient HIRAN Domain Binds 3' DNA Ends to Drive Replication Fork Reversal. Mol.Cell, 58, 2015
1P4W	Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein Descriptor: rcsB Authors: Pristovsek, P, Sengupta, K, Loehr, F, Schaefer, B, Wehland von Trebra, M, Rueterjans, H, Bernhard, F. Deposit date: 2003-04-24 Release date: 2003-06-17 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box. J.Biol.Chem., 278, 2003
3QRF	Structure of a domain-swapped FOXP3 dimer Descriptor: Forkhead box protein P3, MAGNESIUM ION, Nuclear factor of activated T-cells, ... Authors: Bandukwala, H.S, Wu, Y, Feurer, M, Chen, Y, Barbosa, B, Ghosh, S, Stroud, J.C, Benoist, C, Mathis, D, Rao, A, Chen, L. Deposit date: 2011-02-17 Release date: 2011-04-20 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure of a Domain-Swapped FOXP3 Dimer on DNA and Its Function in Regulatory T Cells. Immunity, 34, 2011
1TTU	Crystal Structure of CSL bound to DNA Descriptor: 1,2-ETHANEDIOL, 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3', 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3', ... Authors: Kovall, R.A, Hendrickson, W.A. Deposit date: 2004-06-23 Release date: 2004-08-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Crystal structure of the nuclear effector of Notch signaling, CSL, bound to DNA Embo J., 23, 2004
1IV6	Solution Structure of the DNA Complex of Human TRF1 Descriptor: 5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', TELOMERIC REPEAT BINDING FACTOR 1 Authors: Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2002-03-14 Release date: 2002-04-17 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of a telomeric DNA complex of human TRF1. Structure, 9, 2001
1OPC	OMPR DNA-BINDING DOMAIN, ESCHERICHIA COLI Descriptor: OMPR Authors: Martinez-Hackert, E, Stock, A.M. Deposit date: 1996-12-16 Release date: 1997-04-01 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.95 Å) Cite: The DNA-binding domain of OmpR: crystal structures of a winged helix transcription factor. Structure, 5, 1997
1IRG	INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES Descriptor: INTERFERON REGULATORY FACTOR-2 Authors: Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. Deposit date: 1997-11-25 Release date: 1998-03-18 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
2MH2	Structural insights into the DNA recognition and protein interaction domains reveal fundamental homologous DNA pairing properties of HOP2 Descriptor: Homologous-pairing protein 2 homolog Authors: Moktan, H, Guiraldelli, M.F, Eyter, C.A, Zhao, W, Camerini-Otero, R.D, Sung, P, Zhou, D.H, Pezza, R.J. Deposit date: 2013-11-13 Release date: 2014-04-16 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution Structure and DNA-binding Properties of the Winged Helix Domain of the Meiotic Recombination HOP2 Protein. J.Biol.Chem., 289, 2014
1IRF	INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE Descriptor: INTERFERON REGULATORY FACTOR-2 Authors: Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. Deposit date: 1997-11-24 Release date: 1998-01-28 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
3ZI5	Crystal STRUCTURE OF RESTRICTION ENDONUCLEASE BFII C-TERMINAL RECOGNITION DOMAIN IN COMPLEX WITH COGNATE DNA Descriptor: 5'-D(*AP*GP*CP*AP*CP*TP*GP*GP*GP*TP*CP*GP)-3', 5'-D(*CP*GP*AP*CP*CP*CP*AP*GP*TP*GP*CP*TP)-3', RESTRICTION ENDONUCLEASE Authors: Golovenko, D, Manakova, E, Zakrys, L, Zaremba, M, Sasnauskas, G, Grazulis, S, Siksnys, V. Deposit date: 2013-01-03 Release date: 2014-01-15 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural Insight Into the Specificity of the B3 DNA-Binding Domains Provided by the Co-Crystal Structure of the C-Terminal Fragment of Bfii Restriction Enzyme Nucleic Acids Res., 42, 2014
4L4U	Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains Descriptor: Transcriptional regulator (NtrC family) Authors: Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. Deposit date: 2013-06-09 Release date: 2013-08-28 Last modified: 2013-10-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
7M0C	Post-catalytic nicked complex of DNA Polymerase Lambda with bound mismatched DSB substrate Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*AP*GP*TP*GP*CP*T)-3'), ... Authors: Kaminski, A.M, Bebenek, K, Pedersen, L.C, Kunkel, T.A. Deposit date: 2021-03-10 Release date: 2022-03-16 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Comprehensive structural survey of DNA double-strand break synapsis by DNA Polymerase Lambda Not Published

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