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6D4C
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BU of 6d4c by Molmil
Crystal structure of Candida boidinii formate dehydrogenase V123G mutant complexed with NAD+ and azide
Descriptor: AZIDE ION, CHLORIDE ION, Formate dehydrogenase, ...
Authors:Guo, Q, Ye, H, Gakhar, L, Cheatum, C.M, Kohen, A.
Deposit date:2018-04-17
Release date:2019-04-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase
Acs Catalysis, 2019
6WKW
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BU of 6wkw by Molmil
EM structure of CtBP2 with a minimal dehydrogenase domain of CtBP2
Descriptor: C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Jecrois, A.M.
Deposit date:2020-04-17
Release date:2020-12-02
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structure of CtBP2 confirms tetrameric architecture.
Structure, 29, 2021
8BXX
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BU of 8bxx by Molmil
Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in complex with NAD and azide.
Descriptor: 1,2-ETHANEDIOL, AZIDE ION, Formate dehydrogenase, ...
Authors:Robescu, M.S, Rubini, R, Filippini, F, Bergantino, B, Cendron, L.
Deposit date:2022-12-10
Release date:2023-01-18
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:From the amelioration of a NADP+-dependent formate dehydrogenase to the discovery of a new enzyme: round trip from theory to practice
ChemCatChem, 2020
7QZ1
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BU of 7qz1 by Molmil
Formate dehydrogenase from Starkeya novella
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Pontillo, N, Slotboom, D.J, Guskov, A.
Deposit date:2022-01-30
Release date:2023-02-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Biochemical and structural insight into the chemical resistance and cofactor specificity of the formate dehydrogenase from Starkeya novella.
Febs J., 290, 2023
6D4B
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BU of 6d4b by Molmil
Crystal structure of Candida boidinii formate dehydrogenase V123A mutant complexed with NAD+ and azide
Descriptor: AZIDE ION, CHLORIDE ION, Formate dehydrogenase, ...
Authors:Guo, Q, Ye, H, Gakhar, L, Cheatum, C.M, Kohen, A.
Deposit date:2018-04-17
Release date:2019-04-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Oscillatory Active-site Motions Correlate with Kinetic Isotope Effects in Formate Dehydrogenase
Acs Catalysis, 2019
1SC6
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BU of 1sc6 by Molmil
Crystal Structure of W139G D-3-Phosphoglycerate dehydrogenase complexed with NAD+
Descriptor: D-3-phosphoglycerate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Bell, J.K, Grant, G.A, Banaszak, L.J.
Deposit date:2004-02-11
Release date:2005-02-22
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Multiconformational states in phosphoglycerate dehydrogenase
Biochemistry, 43, 2004
5J23
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BU of 5j23 by Molmil
Crystal structure of NADPH-dependent glyoxylate/hydroxypyruvate reductase SMc04462 (SmGhrB) from Sinorhizobium meliloti in complex with 2'-phospho-ADP-ribose
Descriptor: 2-hydroxyacid dehydrogenase, ACETATE ION, CHLORIDE ION, ...
Authors:Shabalin, I.G, Gasiorowska, O.A, Handing, K.B, Bonanno, J, Kutner, J, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2016-03-29
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.
Biochemistry, 57, 2018
7ARZ
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BU of 7arz by Molmil
Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens
Descriptor: AZIDE ION, Formate dehydrogenase, mitochondrial, ...
Authors:Goryaynova, D.A, Nikolaeva, A.Y, Pometun, A.A, Savin, S.S, Parshin, P.D, Popov, V.O, Tishkov, V.I, Boyko, K.M.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens
To Be Published
4S1V
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BU of 4s1v by Molmil
Crystal structure of phosphoglycerate oxidoreductase from Vibrio Cholerae o395
Descriptor: D-3-phosphoglycerate dehydrogenase-related protein
Authors:Tarique, K.F, Rehman, S.A.A, Devi, S, Gourinath, S.
Deposit date:2015-01-15
Release date:2015-01-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Phosphoglycerate Oxidoreductase from Vibrio Cholerae O395
To be Published
6JWG
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BU of 6jwg by Molmil
Crystal structure of Formate dehydrogenase mutant C256I/E261P/S381I from Pseudomonas sp. 101
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Formate dehydrogenase, GLYCEROL
Authors:Feng, Y, Guo, X, Xue, S, Zhao, Z.
Deposit date:2019-04-20
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.081 Å)
Cite:Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor.
Chemistry, 26, 2020
3ORQ
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BU of 3orq by Molmil
Crystal Structure of N5-Carboxyaminoimidazole synthetase from Staphylococcus aureus complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Brugarolas, P, Duguid, E.M, Zhang, W, Poor, C.B, He, C.
Deposit date:2010-09-07
Release date:2011-07-20
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Structural and biochemical characterization of N5-carboxyaminoimidazole ribonucleotide synthetase and N5-carboxyaminoimidazole ribonucleotide mutase from Staphylococcus aureus.
Acta Crystallogr.,Sect.D, 67, 2011
6JUJ
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BU of 6juj by Molmil
Crystal structure of Formate dehydrogenase mutant V198I/C256I/P260S/E261P/S381N/S383F from Pseudomonas sp. 101in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide
Descriptor: Formate dehydrogenase, GLYCEROL, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
Authors:Feng, Y, Guo, X, Xue, S, Zhao, Z.
Deposit date:2019-04-14
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.183 Å)
Cite:Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor.
Chemistry, 26, 2020
4U6S
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BU of 4u6s by Molmil
CtBP1 in complex with substrate phenylpyruvate
Descriptor: 3-PHENYLPYRUVIC ACID, C-terminal-binding protein 1, CALCIUM ION, ...
Authors:Hilbert, B.J, Morris, B.L, Ellis, K.C, Paulsen, J.L, Schiffer, C.A, Grossman, S.R, Royer Jr, W.E.
Deposit date:2014-07-29
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Design of a High Affinity Inhibitor to Human CtBP.
Acs Chem.Biol., 10, 2015
8ATI
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BU of 8ati by Molmil
Human CtBP2(31-364) in complex with RAI2 peptide(315-322)
Descriptor: DI(HYDROXYETHYL)ETHER, Isoform 2 of C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Mullapudi, E, Goradia, N, Wilmanns, M.
Deposit date:2022-08-23
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Human CtBP2(31-364) in complex with RAI2 peptide(315-322)
To Be Published
8ARI
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BU of 8ari by Molmil
Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament
Descriptor: C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinoic acid-induced protein 2
Authors:Mullapudi, E, Goradia, N, Wilmanns, M.
Deposit date:2022-08-16
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament
To Be Published
4U6Q
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BU of 4u6q by Molmil
CtBP1 bound to inhibitor 2-(hydroxyimino)-3-phenylpropanoic acid
Descriptor: (2E)-2-(hydroxyimino)-3-phenylpropanoic acid, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C-terminal-binding protein 1, ...
Authors:Hilbert, B.J, Morris, B.L, Ellis, K.C, Paulsen, J.L, Schiffer, C.A, Grossman, S.R, Royer Jr, W.E.
Deposit date:2014-07-29
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Guided Design of a High Affinity Inhibitor to Human CtBP.
Acs Chem.Biol., 10, 2015
1DXY
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BU of 1dxy by Molmil
STRUCTURE OF D-2-HYDROXYISOCAPROATE DEHYDROGENASE
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, D-2-HYDROXYISOCAPROATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Dengler, U, Niefind, K, Kiess, M, Schomburg, D.
Deposit date:1996-08-13
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of a ternary complex of D-2-hydroxyisocaproate dehydrogenase from Lactobacillus casei, NAD+ and 2-oxoisocaproate at 1.9 A resolution.
J.Mol.Biol., 267, 1997
7YA3
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BU of 7ya3 by Molmil
Formate dehydrogenase from Novosphingobium sp. AP12 with NADP and Azide
Descriptor: AZIDE ION, Formate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Kim, S, Kim, K.-J.
Deposit date:2022-06-27
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dual cofactor specific formate dehydrogenase from Novosphingobium sp. AP12 with high activity.
To Be Published
7YA4
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BU of 7ya4 by Molmil
Formate dehydrogenase from Novosphingobium sp. AP12 with NAD and Azide
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AZIDE ION, ...
Authors:Kim, S, Kim, K.-J.
Deposit date:2022-06-27
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dual cofactor specific formate dehydrogenase from Novosphingobium sp. AP12 with high activity.
To Be Published
7WN9
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BU of 7wn9 by Molmil
Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)
Descriptor: ACETATE ION, Putative D-lactate dehydrogenase
Authors:Dao, O, Lee, K.H.
Deposit date:2022-01-17
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)
To Be Published
3WNV
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BU of 3wnv by Molmil
Crystal structure of a glyoxylate reductase from Paecilomyes thermophila
Descriptor: SULFATE ION, glyoxylate reductase
Authors:Duan, X, Hu, S, Zhou, P, Zhou, Y, Jiang, Z.
Deposit date:2013-12-17
Release date:2014-12-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Characterization and crystal structure of a first fungal glyoxylate reductase from Paecilomyes thermophila
Enzyme.Microb.Technol., 60, 2014
3WR5
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BU of 3wr5 by Molmil
Structural basis on the efficient CO2 reduction of acidophilic formate dehydrogenase
Descriptor: Formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Ha, J.M, Jeon, S.T, Yoon, H.J, Lee, H.H.
Deposit date:2014-02-16
Release date:2015-02-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.142 Å)
Cite:Structural basis on the efficient CO2 reduction of acidophilic formate dehydrogenase
To be Published
4G2N
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BU of 4g2n by Molmil
Crystal structure of putative D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding from Polaromonas sp. JS6 66
Descriptor: CHLORIDE ION, D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Zenchek, W, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-07-12
Release date:2012-07-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of putative D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding from Polaromonas sp. JS6 66
To be Published
7VA1
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BU of 7va1 by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
Descriptor: 4-[(3-ethanoylphenyl)sulfamoyl]-~{N}-[4-(3-fluorophenyl)-1,3-thiazol-2-yl]benzamide, D-3-phosphoglycerate dehydrogenase
Authors:Cen, Y, Gao, D, Zhou, J, Tian, P.
Deposit date:2021-08-27
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
To Be Published
1GDH
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BU of 1gdh by Molmil
CRYSTAL STRUCTURE OF A NAD-DEPENDENT D-GLYCERATE DEHYDROGENASE AT 2.4 ANGSTROMS RESOLUTION
Descriptor: D-GLYCERATE DEHYDROGENASE, SULFATE ION
Authors:Goldberg, J.D, Yoshida, T, Brick, P.
Deposit date:1993-09-22
Release date:1994-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a NAD-dependent D-glycerate dehydrogenase at 2.4 A resolution.
J.Mol.Biol., 236, 1994

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