Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2MYS
DownloadVisualize
BU of 2mys by Molmil
MYOSIN SUBFRAGMENT-1, ALPHA CARBON COORDINATES ONLY FOR THE TWO LIGHT CHAINS
Descriptor: MAGNESIUM ION, MYOSIN, SULFATE ION
Authors:Rayment, I, Holden, H.M.
Deposit date:1996-06-27
Release date:1997-01-11
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Three-dimensional structure of myosin subfragment-1: a molecular motor.
Science, 261, 1993
2NVJ
DownloadVisualize
BU of 2nvj by Molmil
NMR structures of transmembrane segment from subunit a from the yeast proton V-ATPase
Descriptor: 25mer peptide from Vacuolar ATP synthase subunit a, vacuolar isoform
Authors:Hemminga, M.A, van Mierlo, C.P, Wechselberger, R, de Jong, E.R, Duarte, A.M.
Deposit date:2006-11-13
Release date:2007-10-02
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Segment TM7 from the cytoplasmic hemi-channel from V(O)-H(+)-V-ATPase includes a flexible region that has a potential role in proton translocation
Biochim.Biophys.Acta, 1768, 2007
8BGN
DownloadVisualize
BU of 8bgn by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Diacetylchitobiose deacetylase, ...
Authors:Rypniewski, W, Bejger, M, Biniek-Antosiak, K.
Deposit date:2022-10-28
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
8BGP
DownloadVisualize
BU of 8bgp by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus anomalous data
Descriptor: Diacetylchitobiose deacetylase, ZINC ION
Authors:Rypniewski, W, Biniek-Antosiak, K, Bejger, M.
Deposit date:2022-10-28
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
8BGO
DownloadVisualize
BU of 8bgo by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus with substrate N,N-diacetylchitobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Diacetylchitobiose deacetylase, ZINC ION
Authors:Rypniewski, W, Bejger, M, Biniek-Antosiak, K.
Deposit date:2022-10-28
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
8B6R
DownloadVisualize
BU of 8b6r by Molmil
X-ray structure of the haloalkane dehalogenase HaloTag7 labeled with a chloroalkane Cyanine3 fluorophore substrate
Descriptor: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ...
Authors:Tarnawski, M, Hellweg, L, Hiblot, J.
Deposit date:2022-09-27
Release date:2023-07-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A general method for the development of multicolor biosensors with large dynamic ranges.
Nat.Chem.Biol., 19, 2023
6ZK1
DownloadVisualize
BU of 6zk1 by Molmil
Plant nucleoside hydrolase - ZmNRh2b enzyme
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2020-06-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK2
DownloadVisualize
BU of 6zk2 by Molmil
Plant nucleoside hydrolase - ZmNRh2b in complex with forodesine
Descriptor: 1,2-ETHANEDIOL, 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2020-06-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK3
DownloadVisualize
BU of 6zk3 by Molmil
Plant nucleoside hydrolase - ZmNRh2b in complex with ribose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2020-06-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK4
DownloadVisualize
BU of 6zk4 by Molmil
Plant nucleoside hydrolase - ZmNRh2b with a bound adenine
Descriptor: 1,2-ETHANEDIOL, ADENINE, CALCIUM ION, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2020-06-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK5
DownloadVisualize
BU of 6zk5 by Molmil
Plant nucleoside hydrolase - ZmNRh3 enzyme in complex with forodesine
Descriptor: 1,2-ETHANEDIOL, 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2020-06-29
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
7P2E
DownloadVisualize
BU of 7p2e by Molmil
Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
Descriptor: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Itoh, Y, Khawaja, A, Singh, V, Rorbach, J, Amunts, A.
Deposit date:2021-07-05
Release date:2022-07-27
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the mitoribosomal small subunit with streptomycin reveals Fe-S clusters and physiological molecules.
Elife, 11, 2022
3BN3
DownloadVisualize
BU of 3bn3 by Molmil
crystal structure of ICAM-5 in complex with aL I domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, H, Springer, T.A, Wang, J.-h.
Deposit date:2007-12-13
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:An unusual allosteric mobility of the C-terminal helix of a high-affinity alpha L integrin I domain variant bound to ICAM-5
Mol.Cell, 31, 2008
6KGX
DownloadVisualize
BU of 6kgx by Molmil
Structure of the phycobilisome from the red alga Porphyridium purpureum
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta 18 subunit, Allophycocyanin beta subunit, ...
Authors:Sui, S.F, Ma, J.F, You, X, Sun, S.
Deposit date:2019-07-12
Release date:2019-12-11
Last modified:2020-03-18
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of energy transfer in Porphyridium purpureum phycobilisome.
Nature, 579, 2020
7MLH
DownloadVisualize
BU of 7mlh by Molmil
Crystal structure of human IgE (2F10) in complex with Der p 2.0103
Descriptor: CHLORIDE ION, Der p 2 variant 3, IgE Heavy chain, ...
Authors:Khatri, K, Kapingidza, A.B, Richardson, C.M, Vailes, L.D, Wunschmann, S, Dolamore, C, Chapman, M.D, Smith, S.A, Pomes, A, Chruszcz, M.
Deposit date:2021-04-28
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human IgE monoclonal antibody recognition of mite allergen Der p 2 defines structural basis of an epitope for IgE cross-linking and anaphylaxis in vivo.
Pnas Nexus, 1, 2022
7ZBG
DownloadVisualize
BU of 7zbg by Molmil
Human Topoisomerase II Beta ATPase ADP
Descriptor: 4-[(2S,3R)-3-[3,5-bis(oxidanylidene)piperazin-1-ium-1-yl]butan-2-yl]piperazin-4-ium-2,6-dione, ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2-beta, ...
Authors:Ling, E.M, Basle, A, Cowell, I.G, Blower, T.R, Austin, C.A.
Deposit date:2022-03-23
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A comprehensive structural analysis of the ATPase domain of human DNA topoisomerase II beta bound to AMPPNP, ADP, and the bisdioxopiperazine, ICRF193.
Structure, 30, 2022
1D5D
DownloadVisualize
BU of 1d5d by Molmil
The role of phenylalanine 8 in the stabilization of the s protein-s peptide interaction: packing and cavities
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5H
DownloadVisualize
BU of 1d5h by Molmil
Rnase s(f8a). mutant ribonucleasE S.
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2018-03-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5E
DownloadVisualize
BU of 1d5e by Molmil
The role of phenylalanine 8 in the stabilization of the S protein-S peptide interaction: Packing and cavities
Descriptor: RNASE S, S PEPTIDE, SULFATE ION
Authors:Ratnaparkhi, G.S, Varadarajan, R.
Deposit date:1999-10-07
Release date:1999-10-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
2N5E
DownloadVisualize
BU of 2n5e by Molmil
The 3D solution structure of discoidal high-density lipoprotein particles
Descriptor: Apolipoprotein A-I
Authors:Bibow, S, Polyhach, Y, Eichmann, C, Chi, C.N, Kowal, J, Stahlberg, H, Jeschke, G, Guentert, P, Riek, R.
Deposit date:2015-07-15
Release date:2016-12-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of discoidal high-density lipoprotein particles with a shortened apolipoprotein A-I.
Nat.Struct.Mol.Biol., 24, 2017
6L31
DownloadVisualize
BU of 6l31 by Molmil
L1 protein of human papillomavirus 6
Descriptor: Major capsid protein L1
Authors:Li, S.W, Liu, X.L, Gu, Y.
Deposit date:2019-10-07
Release date:2019-12-25
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Neutralization sites of human papillomavirus-6 relate to virus attachment and entry phase in viral infection.
Emerg Microbes Infect, 8, 2019
6HNF
DownloadVisualize
BU of 6hnf by Molmil
Structure in solution of human fibronectin type III-domain 14
Descriptor: Fibronectin
Authors:Zhong, X, Arnolds, O, Krenczyk, O, Gajewski, J, Puetz, S, Herrmann, C, Stoll, R.
Deposit date:2018-09-14
Release date:2018-10-10
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Structure in Solution of Fibronectin Type III Domain 14 Reveals Its Synergistic Heparin Binding Site.
Biochemistry, 57, 2018
7TIO
DownloadVisualize
BU of 7tio by Molmil
B Domain of Staphylococcal protein A: Native backbone
Descriptor: Immunoglobulin G binding protein A
Authors:Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S.
Deposit date:2022-01-14
Release date:2022-11-23
Method:SOLUTION NMR
Cite:Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics.
Chem Sci, 13, 2022
7TIR
DownloadVisualize
BU of 7tir by Molmil
Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 3
Descriptor: Immunoglobulin G binding protein A
Authors:Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S.
Deposit date:2022-01-14
Release date:2022-12-21
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics.
Chem Sci, 13, 2022
7TIP
DownloadVisualize
BU of 7tip by Molmil
Backbone-modified variant of the B domain of Staphylococcal protein A: beta3-residues in helix 2
Descriptor: Immunoglobulin G binding protein A
Authors:Santhouse, J.R, Leung, J.M.G, Chong, L.T, Horne, W.S.
Deposit date:2022-01-14
Release date:2022-12-21
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Implications of the unfolded state in the folding energetics of heterogeneous-backbone protein mimetics.
Chem Sci, 13, 2022

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon