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4D9Y
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BU of 4d9y by Molmil
The crystal structure of Chelerythrine bound to DNA d(CGTACG)
Descriptor: 1,2-dimethoxy-12-methyl[1,3]benzodioxolo[5,6-c]phenanthridin-12-ium, CALCIUM ION, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
Authors:Ferraroni, M, Bazzicalupi, C, Gratteri, P, Bilia, A.R.
Deposit date:2012-01-12
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of Chelerythrine bound to DNA d(CGTACG)
To be Published
9FF6
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BU of 9ff6 by Molmil
Human transthyretin (TTR) in complex with (E)-4-((((2-methoxybenzyl)oxy)imino)methyl)benzoic acid (Lic157)
Descriptor: 1,2-ETHANEDIOL, 4-[(~{Z})-(2-methoxyphenyl)methoxyiminomethyl]benzoic acid, GLYCEROL, ...
Authors:Ciccone, L, Shepard, W, Sirigu, S, Camodeca, C, Mazzoccchi, F, Fruchart, C, Nencetti, S, Orlandini, E.
Deposit date:2024-05-22
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Human transthyretin (TTR) in complex with (E)-4-((((2-methoxybenzyl)oxy)imino)methyl)benzoic acid (Lic157)
To Be Published
5BJU
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BU of 5bju by Molmil
X-ray structure of the PglF dehydratase from Campylobacter jejuni in complex with UDP and NAD(H)
Descriptor: 1,2-ETHANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
Authors:Riegert, A.S, Thoden, J.B, Holden, H.M.
Deposit date:2017-09-12
Release date:2017-11-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Biochemical Investigation of PglF from Campylobacter jejuni Reveals a New Mechanism for a Member of the Short Chain Dehydrogenase/Reductase Superfamily.
Biochemistry, 56, 2017
6MTZ
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BU of 6mtz by Molmil
Crystal structure of an uncharacterized protein from Helicobacter pylori G27
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, HepC.19480.a.B1, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-10-22
Release date:2018-12-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of an uncharacterized protein from Helicobacter pylori G27
TO BE PUBLISHED
1TNK
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BU of 1tnk by Molmil
PREDICTION OF NOVEL SERINE PROTEASE INHIBITORS
Descriptor: 3-PHENYLPROPYLAMINE, CALCIUM ION, TRYPSIN
Authors:Kurinov, I, Harrison, R.W.
Deposit date:1994-07-21
Release date:1994-11-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Prediction of new serine proteinase inhibitors.
Nat.Struct.Biol., 1, 1994
8CUR
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BU of 8cur by Molmil
Crystal structure of Cdk2 in complex with Cyclin A inhibitor 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid
Descriptor: 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid, Cyclin-dependent kinase 2
Authors:Tripathi, S.M, Tambo, C.S, Kiss, G, Rubin, S.M.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biolayer Interferometry Assay for Cyclin-Dependent Kinase-Cyclin Association Reveals Diverse Effects of Cdk2 Inhibitors on Cyclin Binding Kinetics.
Acs Chem.Biol., 18, 2023
9FMO
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BU of 9fmo by Molmil
Crystal structure of C. merolae LAMMER-like dual specificity kinase (CmLIK) kinase domain
Descriptor: 1,2-ETHANEDIOL, LAMMER-like dual specificity kinase, ZINC ION
Authors:Dimos-Roehl, B, Haltenhof, T, Kotte, A, Heyd, F, Loll, B.
Deposit date:2024-06-06
Release date:2025-06-18
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Crystal structure of C. merolae LAMMER-like dual specificity kinase CmLIK kinase domain
to be published
8WFW
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BU of 8wfw by Molmil
Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum (Data 4)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, SODIUM ION
Authors:Nam, K.H.
Deposit date:2023-09-20
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The Conformational Change of the L3 Loop Affects the Structural Changes in the Substrate Binding Pocket Entrance of beta-Glucosidase.
Molecules, 28, 2023
6FR0
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BU of 6fr0 by Molmil
Crystal structure of CREBBP bromodomain complexd with PB08
Descriptor: CREB-binding protein, ~{N}-[3-(5-ethanoyl-2-ethoxy-phenyl)-5-(2-ethyl-5-methyl-3-oxidanylidene-1,2-oxazol-4-yl)phenyl]furan-2-carboxamide
Authors:Zhu, J, Caflisch, A.
Deposit date:2018-02-15
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
6FRF
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BU of 6frf by Molmil
Crystal structure of CREBBP bromodomain complexd with PA10
Descriptor: CREB-binding protein, ~{N}-[3-(3,5-dimethyl-1,2-oxazol-4-yl)-5-(5-ethanoyl-2-ethoxy-phenyl)phenyl]furan-2-carboxamide
Authors:Zhu, J, Caflisch, A.
Deposit date:2018-02-15
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
8WFV
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BU of 8wfv by Molmil
Crystal structure of beta-glucosidase from Thermoanaerobacterium saccharolyticum (Data 3)
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, SODIUM ION
Authors:Nam, K.H.
Deposit date:2023-09-20
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Conformational Change of the L3 Loop Affects the Structural Changes in the Substrate Binding Pocket Entrance of beta-Glucosidase.
Molecules, 28, 2023
6STT
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BU of 6stt by Molmil
Adenovirus 29 Fiber Knob protein in complex with Sialic acid
Descriptor: Fiber, N-acetyl-alpha-neuraminic acid
Authors:Baker, A.T, Mundy, R.M, Rizkallah, P.J, Parker, A.L.
Deposit date:2019-09-11
Release date:2021-03-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus
npj Viruses, 1, 2023
6FQZ
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BU of 6fqz by Molmil
Plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor NADP+ and in complex with its substrate 6-phosphogluconate
Descriptor: 6-PHOSPHOGLUCONIC ACID, 6-phosphogluconate dehydrogenase, decarboxylating, ...
Authors:Fritz-Wolf, K, Haeussler, K, Reichmann, M, Rahlfs, S, Becker, K.
Deposit date:2018-02-15
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of Plasmodium falciparum 6-Phosphogluconate Dehydrogenase as an Antimalarial Drug Target.
J. Mol. Biol., 430, 2018
8WA5
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BU of 8wa5 by Molmil
Cryo-EM structure of the gastric proton pump Y799W/E936Q mutant in K+-occluded (K+)E2-AlF state
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K.
Deposit date:2023-09-07
Release date:2023-11-29
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.51 Å)
Cite:Specific protonation of acidic residues confers K + selectivity to the gastric proton pump.
J.Biol.Chem., 300, 2023
8QT2
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BU of 8qt2 by Molmil
Crystal structure of human Sirt2 in complex with the super-slow substrate TNFn-6
Descriptor: (R,R)-2,3-BUTANEDIOL, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Friedrich, F, Kalbas, D, Meleshin, M, Einsle, O, Schutkowski, M, Jung, M.
Deposit date:2023-10-12
Release date:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:New Super-Slow Substrates as novel Sirtuin-Inhibitors
To Be Published
7T8G
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BU of 7t8g by Molmil
G93A mutant of human SOD1 bound with MR6-8-2 in P21 space group
Descriptor: ACETATE ION, SELENIUM ATOM, SULFATE ION, ...
Authors:Amporndanai, K, Hasnain, S.S.
Deposit date:2021-12-16
Release date:2023-01-25
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Ebselen analogues delay disease onset and its course in fALS by on-target SOD-1 engagement.
Sci Rep, 14, 2024
5F5Y
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BU of 5f5y by Molmil
WT Drosophila Melanogaster Cycle PAS-B with Bound Ethylene Glycol
Descriptor: 1,2-ETHANEDIOL, Protein cycle
Authors:Manahan, C.C, Crane, B.R.
Deposit date:2015-12-04
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:WT Drosophila Melanogaster Cycle PAS-B with Bound Ethylene Glycol
To Be Published
5LXI
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BU of 5lxi by Molmil
GABARAP-L1 ATG4B LIR Complex
Descriptor: 1,2-ETHANEDIOL, Cysteine protease ATG4B, DI(HYDROXYETHYL)ETHER, ...
Authors:Mouilleron, S, Skytte Rasmussen, M, Kumar Shrestha, B, Wirth, M, Bowitz Larsen, K, Abudu Princely, Y, Sjottem, E, Tooze, S, Lamark, T, Johansen, T, Lee, R.
Deposit date:2016-09-21
Release date:2017-02-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:ATG4B contains a C-terminal LIR motif important for binding and efficient cleavage of mammalian orthologs of yeast Atg8.
Autophagy, 13, 2017
5J9W
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BU of 5j9w by Molmil
Crystal structure of the NuA4 core complex
Descriptor: ACETYL COENZYME *A, Chromatin modification-related protein EAF6, Chromatin modification-related protein YNG2, ...
Authors:Chen, Z.C, Xu, P.
Deposit date:2016-04-11
Release date:2016-10-26
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The NuA4 Core Complex Acetylates Nucleosomal Histone H4 through a Double Recognition Mechanism
Mol.Cell, 63, 2016
4B7H
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BU of 4b7h by Molmil
Structure of a highdose liganded bacterial catalase
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CATALASE, CHLORIDE ION, ...
Authors:Gumiero, A, Walsh, M.
Deposit date:2012-08-20
Release date:2013-08-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:A Structural and Dynamic Investigation of the Inhibition of Catalase by Nitric Oxide.
Org.Biomol.Chem., 11, 2013
9LFV
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BU of 9lfv by Molmil
Crystal structure of mouse RIP3 kinase domain complexed with LK01004
Descriptor: 3-[2-[(2~{R})-butan-2-yl]-1,3-benzothiazol-5-yl]-1-~{tert}-butyl-pyrazolo[3,4-d]pyrimidin-4-amine, 3-[2-[(2~{S})-butan-2-yl]-1,3-benzothiazol-5-yl]-1-~{tert}-butyl-pyrazolo[3,4-d]pyrimidin-4-amine, Receptor-interacting serine/threonine-protein kinase 3
Authors:Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
Deposit date:2025-01-09
Release date:2025-05-07
Last modified:2025-05-21
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structure-based design of potent and selective inhibitors targeting RIPK3 for eliminating on-target toxicity in vitro.
Nat Commun, 16, 2025
9D1Q
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BU of 9d1q by Molmil
Lucilia cuprina alpha esterase 7 directed evolution round 6
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Carboxylic ester hydrolase, ...
Authors:Frkic, R.L, Fraser, N, Mabbitt, P.D, Jackson, C.J.
Deposit date:2024-08-07
Release date:2025-08-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Lucilia cuprina alpha esterase 7 directed evolution round 6
To Be Published
5ZRN
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BU of 5zrn by Molmil
Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis
Descriptor: 5'-O-{[(1R)-1-hydroxydodecyl]sulfamoyl}adenosine, Long-chain-fatty-acid--CoA ligase FadD13
Authors:Goyal, A, Sankaranarayanan, R.
Deposit date:2018-04-24
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Inhibitor bound crystal structure of N-terminal domain of FACL13 from Mycobacterium tuberculosis
To Be Published
8HP0
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BU of 8hp0 by Molmil
Crystal structure of meso-diaminopimelate dehydrogenase from Prevotella timonensis
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Meso-diaminopimelate D-dehydrogenase, SULFATE ION
Authors:Tan, Y, Song, W.
Deposit date:2022-12-11
Release date:2023-12-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Rational Design of Meso -Diaminopimelate Dehydrogenase with Enhanced Reductive Amination Activity for Efficient Production of d- p -Hydroxyphenylglycine.
Appl.Environ.Microbiol., 89, 2023
9D1R
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BU of 9d1r by Molmil
Lucilia cuprina alpha esterase 7 directed evolution round 7
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, Carboxylic ester hydrolase, ...
Authors:Frkic, R.L, Fraser, N, Mabbitt, P.D, Jackson, C.J.
Deposit date:2024-08-07
Release date:2025-08-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Lucilia cuprina alpha esterase 7 directed evolution round 7
To Be Published

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