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1X8W
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Structure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active Site
Descriptor: MAGNESIUM ION, Tetrahymena ribozyme RNA
Authors:Guo, F, Gooding, A.R, Cech, T.R.
Deposit date:2004-08-18
Release date:2004-11-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of the Tetrahymena ribozyme: base triple sandwich and metal ion at the active site.
Mol.Cell, 16, 2004
1XC5
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BU of 1xc5 by Molmil
Solution Structure of the SMRT Deacetylase Activation Domain
Descriptor: Nuclear receptor corepressor 2
Authors:Codina, A, Love, J.D, Li, Y, Lazar, M.A, Neuhaus, D, Schwabe, J.W.R.
Deposit date:2004-09-01
Release date:2005-05-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insights into the interaction and activation of histone deacetylase 3 by nuclear receptor corepressors
Proc.Natl.Acad.Sci.Usa, 102, 2005
1XDX
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Solution Structure of the Tctex1 Light Chain From Chlamydomonas Inner Dynein Arm I1
Descriptor: Tctex1 Light Chain protein
Authors:Wu, H, Maciejewski, M.W, Takebe, S, King, S.M.
Deposit date:2004-09-08
Release date:2005-03-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the Tctex1 Dimer Reveals a Mechanism for Dynein-Cargo Interactions
Structure, 13, 2005
1XPR
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BU of 1xpr by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB)
Descriptor: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', 5A-FORMYLBICYCLOMYCIN, MAGNESIUM ION, ...
Authors:Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M.
Deposit date:2004-10-09
Release date:2004-11-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
Structure, 13, 2005
1X91
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BU of 1x91 by Molmil
Crystal structure of mutant form A of a pectin methylesterase inhibitor from Arabidopsis
Descriptor: invertase/pectin methylesterase inhibitor family protein
Authors:Hothorn, M, Wolf, S, Aloy, P, Greiner, S, Scheffzek, K.
Deposit date:2004-08-19
Release date:2004-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into the target specificity of plant invertase and pectin methylesterase inhibitory proteins
Plant Cell, 16, 2004
1W7Q
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BU of 1w7q by Molmil
Feglymycin P65 crystal form
Descriptor: 1,2-ETHANEDIOL, ETHANOL, FEGLYMYCIN
Authors:Bunkoczi, G, Vertesy, L, Sheldrick, G.M.
Deposit date:2004-09-08
Release date:2005-03-08
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Antiviral Antibiotic Feglymycin: First Direct Methods Solution of a 1000Plus Equal-Atom Structure
Angew.Chem.Int.Ed.Engl., 44, 2005
1VDV
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BU of 1vdv by Molmil
Bovine Milk Xanthine Dehydrogenase Y-700 Bound Form
Descriptor: 1-[3-CYANO-4-(NEOPENTYLOXY)PHENYL]-1H-PYRAZOLE-4-CARBOXYLIC ACID, ACETIC ACID, CALCIUM ION, ...
Authors:Fukunari, A, Okamoto, K, Nishino, T, Eger, B.T, Pai, E.F, Kamezawa, M, Yamada, I, Kato, N.
Deposit date:2004-03-25
Release date:2004-12-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Y-700 [1-[3-Cyano-4-(2,2-dimethylpropoxy)phenyl]-1H-pyrazole-4-carboxylic acid]: a potent xanthine oxidoreductase inhibitor with hepatic excretion
J.Pharmacol.Exp.Ther., 311, 2004
1VY6
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BU of 1vy6 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Steitz, T.A, Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
1W56
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Stepwise introduction of zinc binding site into porphobilinogen synthase of Pseudomonas aeruginosa (mutations A129C and D131C)
Descriptor: DELTA-AMINOLEVULINIC ACID DEHYDRATASE, FORMIC ACID, MAGNESIUM ION, ...
Authors:Frere, F, Reents, H, Schubert, W.-D, Heinz, D.W, Jahn, D.
Deposit date:2004-08-05
Release date:2005-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Tracking the Evolution of Porphobilinogen Synthase Metal Dependence in Vitro
J.Mol.Biol., 345, 2005
1W20
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Structure of Neuraminidase from English duck subtype N6 complexed with 30 mM sialic acid (NANA, Neu5Ac), crystal soaked for 3 hours at 291 K
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Rudino-Pinera, E, Tunnah, P, Crennell, S.J, Webster, R.G, Laver, W.G, Garman, E.F.
Deposit date:2004-06-24
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The Crystal Structure of Type a Influenza Virus Neuraminidase of the N6 Subtype Reveals the Existence of Two Separate Neu5Ac Binding Sites
To be Published
1W3M
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BU of 1w3m by Molmil
Crystal structure of tsushimycin
Descriptor: CALCIUM ION, CHLORIDE ION, Delta-3isotetradecenoic acid, ...
Authors:Bunkoczi, G, Vertesy, L, Sheldrick, G.M.
Deposit date:2004-07-16
Release date:2005-07-27
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structure of the lipopeptide antibiotic tsushimycin.
Acta Crystallogr. D Biol. Crystallogr., 61, 2005
1VY4
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BU of 1vy4 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Steitz, T.A, Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
1W5O
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BU of 1w5o by Molmil
Stepwise introduction of zinc binding site into porphobilinogen synthase of Pseudomonas aeruginosa (mutations A129C, D131C and D139C)
Descriptor: DELTA-AMINOLEVULINIC ACID DEHYDRATASE, GLYCEROL, MAGNESIUM ION, ...
Authors:Frere, F, Reents, H, Schubert, W.-D, Heinz, D.W, Jahn, D.
Deposit date:2004-08-09
Release date:2005-01-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Tracking the Evolution of Porphobilinogen Synthase Metal Dependence in Vitro
J.Mol.Biol., 345, 2005
1VY7
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BU of 1vy7 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Steitz, T.A, Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
1VPX
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Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution
Descriptor: GLYCEROL, PROTEIN (Transaldolase (EC 2.2.1.2)), SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-11-23
Release date:2004-12-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution
To be published
1W2Z
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BU of 1w2z by Molmil
PSAO and Xenon
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AMINE OXIDASE, COPPER CONTAINING, ...
Authors:Duff, A.P, Trambaiolo, D.M, Cohen, A.E, Ellis, P.J, Juda, G.A, Shepard, E.M, Langley, D.B, Dooley, D.M, Freeman, H.C, Guss, J.M.
Deposit date:2004-07-11
Release date:2004-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Using Xenon as a Probe for Dioxygen-Binding Sites in Copper Amine Oxidases.
J.Mol.Biol., 344, 2004
1W1X
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BU of 1w1x by Molmil
Structure of Neuraminidase from English duck subtype N6 complexed with 30 mM sialic acid (NANA, Neu5Ac), crystal soaked for 3 hours at 277 K.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Rudino-Pinera, E, Tunnah, P, Crennell, S.J, Webster, R.G, Laver, W.G, Garman, E.F.
Deposit date:2004-06-24
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Type a Influenza Virus Neuraminidase of the N6 Subtype Reveals the Existence of Two Separate Neu5Ac Binding Sites
To be Published
1VY5
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BU of 1vy5 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Polikanov, Y.S, Steitz, T.A, Innis, C.A.
Deposit date:2014-05-13
Release date:2014-08-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A proton wire to couple aminoacyl-tRNA accommodation and peptide-bond formation on the ribosome.
Nat.Struct.Mol.Biol., 21, 2014
1VKO
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BU of 1vko by Molmil
Crystal structure of inositol-3-phosphate synthase (ce21227) from Caenorhabditis elegans at 2.30 A resolution
Descriptor: CHLORIDE ION, IODIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-06-11
Release date:2004-08-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of inositol-3-phosphate synthase (ce21227) from Caenorhabditis elegans at 2.30 A resolution
To be published
1VLG
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BU of 1vlg by Molmil
Crystal structure of Ferritin (TM1128) from Thermotoga maritima at 2.00 A resolution
Descriptor: FE (III) ION, GLYCEROL, SULFATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-07-23
Release date:2004-08-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Ferritin (TM1128) from Thermotoga maritima at 2.00 A resolution
To be published
1W21
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Structure of Neuraminidase from English duck subtype N6 complexed with 30 mM sialic acid (NANA, Neu5Ac), crystal soaked for 43 hours at 291 K.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Rudino-Pinera, E, Tunnah, P, Crennell, S.J, Webster, R.G, Laver, W.G, Garman, E.F.
Deposit date:2004-06-25
Release date:2006-01-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The Crystal Structure of Type a Influenza Virus Neuraminidase of the N6 Subtype Reveals the Existence of Two Separate Neu5Ac Binding Sites
To be Published
1VVJ
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Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Maehigashi, T, Dunkle, J.A, Dunham, C.M.
Deposit date:2013-05-24
Release date:2014-08-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.440001 Å)
Cite:Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
Proc.Natl.Acad.Sci.USA, 111, 2014
1XWE
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NMR Structure of C345C (NTR) domain of C5 of complement
Descriptor: Complement C5
Authors:Bramham, J, Thai, C.-T, Soares, D.C, Uhrin, D, Ogata, R.T, Barlow, P.N.
Deposit date:2004-10-30
Release date:2004-12-21
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Functional Insights from the Structure of the Multifunctional C345C Domain of C5 of Complement
J.Biol.Chem., 280, 2005
1XNR
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Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
Descriptor: 16S Ribosomal RNA, 16S Ribosomal protein S10, 16S Ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
1XXX
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Crystal structure of Dihydrodipicolinate Synthase (DapA, Rv2753c) from Mycobacterium tuberculosis
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CHLORIDE ION, Dihydrodipicolinate synthase, ...
Authors:Kefala, G, Panjikar, S, Janowski, R, Weiss, M.S, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-11-09
Release date:2006-02-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure and kinetic study of dihydrodipicolinate synthase from Mycobacterium tuberculosis.
Biochem.J., 411, 2008

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